Cloning and expression analysis of phenylalanine ammonia-lyase gene in Lonicera macranthoides
10.7501/j.issn.0253-2670.2019.01.027
- VernacularTitle: 灰毡毛忍冬LmPAL1基因的克隆及表达分析
- Author:
Xun CHEN
1
Author Information
1. College of Pharmacy, Hunan University of Traditional Chinese Medicine
- Publication Type:Journal Article
- Keywords:
Bioinformatics;
Expression analysis;
Gene cloning;
Lonicera macranthoides Hand. -Mazz.;
Phenylalanine ammonia-lyase
- From:
Chinese Traditional and Herbal Drugs
2019;50(1):178-187
- CountryChina
- Language:Chinese
-
Abstract:
Objective To clone the full length of LmPAL1 gene and analyze bioinformatics and expression patterns from Lonicera macranthoides. Methods The total RNA of L. macranthoides was extracted. The full-length cDNA sequence of LmPAL1 gene was cloned by RT-PCR and RACE technique; The genome sequence in bioinformatics was analyzed by using the relevant software; The relative expression of the gene in stem, leaf, and different flower period was determined by using real-time PCR. Results The cloned LmPAL1 gene open reading frame (ORF) was 2 145 bp, encoding 714 amino acids. It was predicted by bioinformatics analysis as hydrophilic protein, being located in the chloroplasts, containing PAL shielding structure domain (527-641 aa). This gene contained PAL/HAL active center sequence GTITASGDLVPLSYIAG (196-212 aa), which was highly similar to other phenylalanine ammonia-lyase. Real-time PCR results showed that the relative expression level of golden yellow flowering flower was higher in seven florescence periods. When comparing the stem, leaf, and white flower bud period, the relative expression of flower was the highest and the leaf was the lowest. Conclusion In this study, PAL1 gene of L. macranthoides was cloned successfully, laying a foundation for further study of the function of this gene and genetic improvement of L. macranthoides quality and providing the research basis for exploring the biosynthesis and regulation of chlorogenic acid in L. macranthoides.
