Characterization of three strains of Comamonas kerstersii
- Author:
WANG Chongzhen
;
DONG Lingzhi
;
CHEN Dongke
- Publication Type:Case Reports
- Keywords:
Comamonas kerstersii;
feces;
biochemical characteristics;
virulence analysis;
PHI interaction analysis
- From:
China Tropical Medicine
2024;24(12):1488-
- CountryChina
- Language:Chinese
-
Abstract:
Objective This study conducted a series of biochemical and genetic analyses on three strains of Comamonas kerstersii isolated, aiming to enhance understanding of the bacterium and provide a reference for preventing and controlling infections and diseases associated with it. Methods The fecal samples of patients from three patients from September to October 2023 in Sanya People's Hospital were inoculated on Columbia blood agar plates, and after sufficient incubation, the target strains were isolated and purified using oxidase reagent. Subsequently, the target colonies were subjected to biochemical identification and antibiotic susceptibility testing using the VITEK2-Compact analysis system, while the VITEK MS mass spectrometer was used to identify the bacterial genus. Meanwhile, bacterial DNA was extracted for 16S rRNA sequencing and bacterial genome framework sequencing, with sequencing analysis performed using various bioinformatics analysis tools. Results Three strains of oxidase-positive single colonies were cultured, and the mass spectrometer could not identify the specific strain. The drug susceptibility test showed that all three strains were sensitive to most drugs, but some were resistant to ciprofloxacin and Compound Sulfamethoxazole. 16S rRNA sequencing identified the bacteria to Comamonas genus, and bacterial genome framework sequencing analysis indicated that all bacteria were Comamonas kerstersii. Bioinformatics analysis showed that all three bacterial strains contained virulence factors related to oxidase-positive enteric pathogenic bacteria, including the flmH gene of Aeromonas, vctC gene and rmlB gene of Vibrio, and the flgG gene and flhC gene of Yersinia. Pathogen-host interaction (PHI) analysis results suggested pathogenic genes in the target bacterial genomes that may cause intestinal infection. Conclusions Comamonas kerstersii cannot be identified by conventional mass spectrometer and requires sequencing for analysis. This bacterium is sensitive to most antibiotics, but individual strains are resistant to ciprofloxacin and Compound Sulfamethoxazole. Comamonas kerstersii is associated with infections, especially gastrointestinal infections, though its pathogenesis remains to be further studied.
- Full text:20251113151836371339.Characterization of three strains of Comamonas kerstersii.pdf
