Pathogenic and molecular characteristics of Klebsiella pneumoniae in fecal samples from diarrhea cases in a district of Beijing in 2018-2021
10.3969/j.issn.1002-2694.2024.00.113
- VernacularTitle:2018-2021年北京市某区腹泻病例粪便中肺炎克雷伯菌的病原学和分子特征分析
- Author:
Shuang ZHANG
1
;
Juan ZHAO
;
Chang LIU
;
Hai-Rui WANG
;
Xi YANG
;
Hui-Bo WANG
;
Yuan-Yuan WANG
;
Hui LI
;
Jian-Tao ZHANG
;
Zhen-Dong ZHANG
;
Nan CHEN
;
Ying LI
;
Mao-Jun ZHANG
;
Rui TIAN
Author Information
1. 北京市顺义区疾病预防控制中心,北京 101300
- Keywords:
Klebsiella pneumoniae;
drug sensitivity test;
whole genome sequencing
- From:
Chinese Journal of Zoonoses
2024;40(8):745-749,757
- CountryChina
- Language:Chinese
-
Abstract:
This study was aimed at investigating the pathogenic and molecular characteristics of Klebsiella pneumoniae(KP)in fecal samples of diarrhea cases in a district of Beijing.Fecal samples from diarrhea cases in an outpatient department in a district of Beijing from 2018 to 2021 were collected,and used for isolation and culture of KP.The KP strains isolated strains were subjected to drug resistance phenotype testing and whole-genome sequencing.Multilocus sequence typing and whole-genome phyletic evolution analysis were performed on the sequencing results.The cases'epidemiological and clinical characteristics were analyzed.From 2018 to 2021,1 103 fecal samples were collected and detected.The total detection rate of KP was 10.43％(115/1 103),and the infection rate of KP mixed with other diarrhea-causing pathogens was 42.61％(49/115).The positivity rate was slightly high(12.47％,61/489)a-mong females and was highest in young adults 16-45 years of age.Small peaks were observed in January,April to May,and August to September.The gastrointestinal symptoms in cases were mainly nausea and watery stool,and the suspicious food was unknown.Ampicillin,tetracycline,and sulfafurazole were the top three antibiotics to which these 115 KP strains showed resistance,and 29 strains were resistant to multiple antibiotics.The strains were divided into 72 sequence types,among which ST23 was dominant.According to the phylogenetic tree,the strains were divided into four main branches,among which 14 ST23 strains had a very close genetic relationship with the highly virulent NTUH-K2044 reference strain.KP infection persisted in fecal samples from diarrhea cases in the district of Beijing.Women and young adults were particularly susceptible.The drug resistance of KP strains in this region was very serious,and the ST types were diverse.Moreover,the ST23 pathogenic strains were closely related to high virulence strains.
