Sequencing Analysis of MiRNA in the Exosomes from Normal and Oxygen and Glucose Deprivation Reperfusion Astrocytes
10.13865/j.cnki.cjbmb.2022.02.1589
- Author:
Pei-Yan LONG
1
;
Wen-Ping ZHANG
1
;
Ju ZHENG
1
;
Yan-Lin FU
1
;
Xiao GAO
1
;
Zheng-Wei WANG
1
;
Yan XIAO
1
;
Pei-Yan LONG
2
;
Wen-Ping ZHANG
2
;
Ju ZHENG
2
;
Yan-Lin FU
2
;
Zheng-Wei WANG
2
;
Yan XIAO
2
Author Information
1. Key Laboratory of Endemic and Minority Disease, Minority of Education
2. Key Laboratory of Medical Biology, Guizhou Medical University
- Publication Type:Journal Article
- Keywords:
astrocytes;
exosomes;
high-throughput sequencing technology;
microRNA(miRNA);
oxygen and glucose deprivation reoxygenation (OGD/R)
- From:
Chinese Journal of Biochemistry and Molecular Biology
2022;38(3):356-364
- CountryChina
- Language:Chinese
-
Abstract:
In this study, high-throughput sequencing technology was used to analyze the differentiallyexpressed microRNA (miRNA) of astrocyte-derived exosomes in control group and oxygen and glucosedeprivation/ reoxygenation (OGD/ R) group. Ultracentrifugation was used to extract exosomes from thesupernatant of astrocyte medium in the control group and OGD/ R group. Transmission electron microscopyshowed that exosomes had a typical vesicle shape with intact membrane and low electron content density. Nanoparticle tracking technology (NTA) detected astrocyte exosomes with a size of 100. 5 ± 31. 1 nm, accounting for 96. 8%. Western blot detection showed that the exosome contained exosome-specificproteins tumor-susceptibility protein (TSG101), heat shock protein 60 (Hsp60), ALG-2-interactingprotein X (ALIX). Compared with the control group, 41 miRNAs in the exosomes of the OGD / R groupwere significantly changed, of which 20 miRNAs were increased and 21 miRNAs were decreasedsignificantly (P < 0. 05). Gene ontology function (GO) analysis showed that significantly differentiallytarget genes were mainly involved in protein glycosylation, lipid metabolism, phosphorylation, Golgiapparatus, endoplasmic reticulum, endosome, cytoplasmic vesicles and cell protrusions, etc. KyotoEncyclopedia of Genes and Genomes (KEGG) pathway analysis found that differential miRNAs weremainly related to metabolic pathways and signaling pathways such as butyrate metabolism, ß-alaninemetabolism, fatty acid degradation, mitophagy and P53 signaling pathway. Sequencing analysis of theexosomal miRNAs derived from control and OGD / R astrocytes and target gene function enrichmentanalysis can be useful for the mechanism study of astrocyte exosomes in response to oxygen and glucosedeprivation reperfusion.
