4.Quantitative Analysis for Telomerase Activity in Rice
Xiao-Chuan LIU ; Yong-Heng LIANG ; Bo CHEN ;
China Biotechnology 2006;0(05):-
The Telomeric Repeat Amplification Protocol(TRAP)and its modified versions change the size and/or the ratio of the telomerase products in the amplification stage of the assay.Based on TRAP,a useful method was developed for detecting telomerase activity in rice.A special precursor primer and a special reverse primer and conducted two steps of PCR cycles were designed.GENE Genius? Bio-imaging System was applied for this quantitative analysis for exploring telomerase activity and its optimal reaction conditions.The method ensured that the optimal reaction conditions for the telomerase was 19℃,13minutes,at a concentration of 0.28 u g/? l.A quantitative analysis method was established for detecting telomerase activity in rice.With this method,we detected telomerase activity in roots,young leaves and young panicles of six parental lines of hybrid rice.The results show that young panicles have the highest telomerase activity,demonstrating that telomerase activity is closely related to the cell vitality in plants.
5.Recent advances in drug screening methods of SARS-CoV-2 spike protein
Li-de HU ; Chuan-feng LIU ; Ping LI ; Guan-yu DONG ; Xin-yong LIU ; Peng ZHAN
Acta Pharmaceutica Sinica 2024;59(2):298-312
The pandemic of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused a serious impact on global public health and the economy. SARS-CoV-2 infiltrates host cells
6.Influence of Montelukast on Plasma Nitric Oxide in Preschool Children with Asthma
huan-yin, YAO ; xiao-qin, YAN ; wen-yong, LOU ; shu-mei, LIU ; chuan-chang, DONG
Journal of Applied Clinical Pediatrics 2006;0(22):-
Objective To explore the influence of montelukast on plasma nitric oxide in preschool children with asthma.Methods Forty-four preschool children with asthma aged 2-5 years who firstly met a criterion of asthma and treated 4 weeks with montelukast were investigated;and nitric oxide levels of plasma were inspected respectively before treatment and after treatment 1 week,4 weeks.Results The level of nitric oxide in the plasma of asthmatic children was obviously higher than that in normal control group(P
7.Diagnostic value of immediate early antigen-mRNA in the diagnosis of cytomegalovirus infection after kidney transplantation
Chuan ZHANG ; Yong SHAO ; Zhizhong GAO ; Minggang ZHANG ; Wentao WANG ; Yunli LIU
Clinical Medicine of China 2013;(7):714-717
Objective To investigate the diagnostic value of the immediate early antigen(IE) mRNA by nucleic acid sequence-based amplification(NASBA) in peripheral blood cytomegalovirus (CMV) infection,and to establish and promote the diagnosis method for CMV.Methods Five to seven ml blood was taken from 32 patients at 3 week and 7 week after renal transplantation to detect serum cytomegalovirus antigen and antibody expression by NASBA,Real time-PCR and enzyme-linked immunosorbent assay (ELISA) sensitivity and specificity were compared.Results The results of CMV detection in 32 renal transplanted patients respectively showed that the positive rate of peripheral blood IE-mRNA by NASBA was 45.8% (15/32) ;The positive rate of HCMV-DNA in blood by Real time-PCR was 45.8% (15/32).Using ELISA,the positive rate of HCMV-(IgG +IgM) was 37.5% (14/32).IE-mRNA and HCMV-DNA had higher sensitivity and specificity and lower false positive rate than HCMV-(IgG +IgM).The positive rates of IE-mRNA by NASBA,Real time-PCR and ELISA were 92.8%,71.5% and 42.8% respectively in the 14 cases.Conclusion The nucleic acid amplification method (NASBA based sequence) and Real time-PCR are sensitive,rapid diagnosis methods of HCMV infection,with higher sensitivity and specificity and lower false positive rate than traditional ELISA.And NASBA detection of IE-mRNA has good value for auxiliary clinical diagnosis.
8.Clinical significance of human cytomegalovirus pp67-mRNA in renal transplant recipients
Chuan ZHANG ; Yong SHAO ; Zhizhong GAO ; Minggang ZHANG ; Wentao WANG ; Yunli LIU
Journal of Chinese Physician 2012;14(1):9-12
ObjectiveTo investigate the relation of the human cytomegalovirus pp67-mRNA with the active infection in renal transplant recipients and the role in the direction for antiviral therapy.Methods Total 128 samples were collected from peripheral blood treated with EDTA of 32 recipients at the 3rd week or the 7th week after transplantation.IFA was used to detect CMV pp65 antigen,and NASBA was used to detect pp67 mRNA assay.Compared with CMV-Ag,the recipients were followed up to observe the change of pp67 in the cases of the active infection and the CMV disease.ResultsCompared with the proportion between two groups,44 samples out of 128 samples showed CMV-Ag pp65 positive,while pp67-mRNA were positive in 21 samples.8 patients had been found positive CMV-Ag pp65 and pp67-mRNA; 12 recipients were clinically diagnosed with HCMV disease.In the early stage of the HCMV infection,the sensitivity and specificity of the CMV-Ag pp65 ( 91.7%,50.0% ) was higher than that of pp67-mRNA ( 66.7%,95.0% ).During the periods of symptoms appeared and the late stage of clinical treatment,the specificity of pp67-mRNA was higher than that of CMV-Ag pp65,while the sensitivity sit on the contrary.And in the antiviral therapy course,the indicator of antiviral therapy pp67 turned negative more quickly than the CMVAg,the therapy course could be reduced.ConclusionsBoth of CMV-Ag pp65 and of pp67-mRNA have clinical significance.Testing for CMV-Ag pp65 is suitable for detecting HCMV active infection at the early stage,which was important for in time anti-virus treatment in the clinical settings.The test for pp67-mRNA is a quick method to accquire the accurate results; therefore,it can be used as the reference criteria for the clinical anti-virus treatment.
9.Risk factors for imipenem-resistant Pseudomonas aeruginosa infection in neonatal intensive care unit
Jie YANG ; Ruihua LUO ; Wenyu DENG ; Yong ZHANG ; Weiwei GAO ; Chuan NIE ; Xiaohong LIU
Chinese Journal of Perinatal Medicine 2013;16(4):222-226
Objective To determine the risk factors for imipenem-resistant Pseudomonas aeruginosa (IRPA) infections in neonatal intensive care unit (NICU).Methods One hundred and eighty-eight Pseudomonas aeruginosa infected children (confirmed by pathogenic examination) in the NICU of Maternal and Child Health Hospital of Guangdong from January 1,2008 to December 31,2011,were chosen as the objects of study,and were divided into two groups.The first group included 73 children that had been isolated with IRPA strains(IRPA group),and the second group included 115 children that only had imipenem-sensitive Pseudo monas aeruginosa (ISPA) strains (ISPA group).Chi-square test or t-test was applied.The risk factors were investigated by univariate or multivariate Logistic regression analysis.Results Data from univariate analysis showed that the gestational age and birth weight of neonates were lower than those in ISPA group [(34.0±3.5) weeks vs (35.6±2.8)weeks,t=3.413,P<0.01; (1848.1±276.4) g vs (2110.7±345.6) g,t=5.472,P<0.01].There were more neonates with gestational age ≤ 32 weeks [67.1% (49/73) vs 45.2 % (52/115)],birth weight <1500 g [73.9% (54/73) vs 33.0%(38/115)],small for gestational age [68.5% (50/73) vs 29.6% (34/115)],receiving imipenem [72.6% (53/73) vs 27.0% (31/115)] or the third generation cephalosporins [65.8% (48/73) vs 33.0% (38/115)] two weeks before the isolation of Pseudomonas aeruginosa,and mechanical ventilation [78.1% (57/73) vs 61.7 % (71/115)],deep vein catheterization [83.6%(61/73) vs 65.2%(75/115)] in the IRPA group than in the ISPA group (all P<0.05 or 0.01).The multivariate Logistic regression analysis revealed that imipenem treatment within two weeks before the isolation of Pseudomonas aeruginosa (OR=6.409; 95% CI:1.926-21.333,P =0.002) was an independent risk factor.Conclusions IRPA infection in NICU hospitalized infants is strongly related to their gestational age and birth weight.History of imipenem administration could be an independent risk factor.
10.Study on three different species tibetan medicine sea buckthorn by 1H-NMR-based metabonomics.
Yong-Wen SU ; Er TAN ; Jing ZHANG ; Jia-Li YOU ; Yue LIU ; Chuan LIU ; Xiang-Dong ZHOU ; Yi ZHANG
China Journal of Chinese Materia Medica 2014;39(21):4234-4239
The 1H-NMR fingerprints of three different species tibetan medicine sea buckthorn were established by 1H-HMR metabolomics to find out different motablism which could provide a new method for the quality evaluation of sea buckthorn. The obtained free induction decay (FID) signal will be imported into MestReNova software and into divide segments. The data will be normalized and processed by principal component analysis and.partial least squares discriminant analysis to perform pattern recognition. The results showed that 25 metabolites belonging to different chemical types were detected from sea buckthorn,including flavonoids, triterpenoids, amino acids, carbohydrates, fatty acids, etc. PCA and PLS-DA analysis showed three different varietiest of sea buckthorn that can be clearly separated by the content of L-quebrachitol, malic acid and some unidentified sugars, which can be used as the differences metabolites of three species of sea buckthorn. 1H-NMR-based metabonomies method had a holistic characteristic with sample preparation and handling. The results of this study can offer an important reference for the species identification and quality control of sea buckthorn.
Hippophae
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metabolism
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Magnetic Resonance Spectroscopy
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methods
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Medicine, Tibetan Traditional
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Metabolomics