1.My viewpoints on strategies of international dissemination and development Of traditional Chinese medical culture
International Journal of Traditional Chinese Medicine 2010;32(3):215-216
The development of the international spread of Chinese medicine facing the serious challenge of the global competition with the tentacles of Chinese medica;communication in the world are spreading even wider.How to make countermeasures.seize an opportunity and receive the challenge to improve international competitiveness effectively and promote sound and rapid development of the internationalization of Chinese medicine have become the focus of common attention.In this paper,I'll discuss some problems in the development of the international communication of the culture of Chinese medicine such as the main task and the principles.
2.Surgical strategy of non-small cell lung cancer with Ⅲa staging
Qingchun ZHAO ; Zihe ZHANG ; Jun CHEN
Journal of International Oncology 2019;46(4):243-247
Patients with Ⅲa staging have a large proportion in non-small cell lung cancer(NSCLC). These patients often lost the opportunity to complete excision of the tumor because the tumor have invaded adja-cent vital organs when diagnosed. Besides,Ⅲa staging contains a lot of complicated clinical TNM stages,so, the opinions of experts at home and abroad are various about treatment of NSCLC with Ⅲa staging. Neoadjuvant therapy, surgery, radiation therapy and chemotherapy play important roles under different conditions. Especially surgery is occupying a pivotal position in comprehensive therapy of Ⅲa NSCLC.
3.New nsp8 isoform suggests mechanism for tuning viral RNA synthesis.
Shuang LI ; Qi ZHAO ; Yinjie ZHANG ; Yang ZHANG ; Mark BARTLAM ; Xuemei LI ; Zihe RAO
Protein & Cell 2010;1(2):198-204
During severe acute respiratory syndrome coronavirus (SARS-CoV) infection, the activity of the replication/transcription complexes (RTC) quickly peaks at 6 hours post infection (h.p.i) and then diminishes significantly in the late post-infection stages. This "down-up-down" regulation of RNA synthesis distinguishes different viral stages: primary translation, genome replication, and finally viron assembly. Regarding the nsp8 as the primase in RNA synthesis, we confirmed that the proteolysis product of the primase (nsp8) contains the globular domain (nsp8C), and indentified the resectioning site that is notably conserved in all the three groups of coronavirus. We subsequently crystallized the complex of SARS-CoV nsp8C and nsp7, and the 3-D structure of this domain revealed its capability to interfuse into the hexadecamer super-complex. This specific proteolysis may indicate one possible mechanism by which coronaviruses to switch from viral infection to genome replication and viral assembly stages.
Amino Acid Sequence
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Crystallography, X-Ray
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DNA Primase
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chemistry
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genetics
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physiology
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Humans
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Isoenzymes
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chemistry
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genetics
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physiology
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Molecular Sequence Data
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Protein Structure, Secondary
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RNA, Viral
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biosynthesis
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SARS Virus
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chemistry
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genetics
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physiology
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Sequence Alignment
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Severe Acute Respiratory Syndrome
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virology
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Virus Replication
4.Crystal structure of human Gadd45γ corrected reveals an active dimer.
Wenzheng ZHANG ; Sheng FU ; Xuefeng LIU ; Xuelian ZHAO ; Wenchi ZHANG ; Wei PENG ; Congying WU ; Yuanyuan LI ; Xuemei LI ; Mark BARTLAM ; Zong-Hao ZENG ; Qimin ZHAN ; Zihe RAO
Protein & Cell 2011;2(10):814-826
The human Gadd45 protein family plays critical roles in DNA repair, negative growth control, genomic stability, cell cycle checkpoints and apoptosis. Here we report the crystal structure of human Gadd45γ [corrected], revealing a unique dimer formed via a bundle of four parallel helices, involving the most conserved residues among the Gadd45 isoforms. Mutational analysis of human Gadd45γ [corrected] identified a conserved, highly acidic patch in the central region of the dimer for interaction with the proliferating cell nuclear antigen (PCNA), p21 and cdc2, suggesting that the parallel dimer is the active form for the interaction. Cellular assays indicate that: (1) dimerization of Gadd45γ [corrected] is necessary for apoptosis as well as growth inhibition, and that cell growth inhibition is caused by both cell cycle arrest and apoptosis; (2) a conserved and highly acidic patch on the dimer surface, including the important residues Glu87 and Asp89, is a putative interface for binding proteins related to the cell cycle, DNA repair and apoptosis. These results reveal the mechanism of self-association by Gadd45 proteins and the importance of this self-association for their biological function.
Amino Acid Motifs
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Animals
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Apoptosis
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radiation effects
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CDC2 Protein Kinase
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Cell Cycle
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Cell Survival
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Crystallography, X-Ray
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Cyclin B
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metabolism
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Cyclin-Dependent Kinase Inhibitor p21
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metabolism
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Cyclin-Dependent Kinases
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HeLa Cells
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Humans
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Intracellular Signaling Peptides and Proteins
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chemistry
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genetics
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metabolism
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Mice
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Mutagenesis, Site-Directed
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Mutation, Missense
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Proliferating Cell Nuclear Antigen
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metabolism
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Protein Binding
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Protein Interaction Domains and Motifs
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Protein Multimerization
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Protein Structure, Quaternary
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Ultraviolet Rays
5.Material Basis and Pharmacological Action of Tongxie Yaofang: A Review
Qingyu ZHAO ; Miao ZHANG ; Wenjing ZHAO ; Yiming WANG ; Fangyu SUI ; Zihe GUAN ; Jianwei WANG
Chinese Journal of Experimental Traditional Medical Formulae 2023;29(8):237-245
Tongxie Yaofang, also known as Baizhu Shaoyaosan, was first recorded in Danxi's Experiential Therapy (《丹溪心法》) by ZHU Danxi in the Yuan dynasty. It is composed of Atractylodis Macrocephalae Rhizoma, Paeoniae Radix Alba, Citri Reticulatae Pericarpium, and Saposhnikoviae Radix, and serves as the representative prescription for the treatment of painful diarrhea. It has the functions of tonifying the spleen, emolliating the liver, relieving pain, and checking diarrhea, and is mainly used in the treatment of gastrointestinal diseases such as irritable bowel syndrome (IBS) and ulcerative colitis (UC). In addition, it is effective in treating gastrointestinal disorders with mental and psychological abnormalities, as well as obstinate anorexia in children, depression syndrome, and respiratory diseases. Experimental research and clinical practice have shown that Tongxie Yaofang has multi-component, multi-pathway, and multi-target characteristics in the treatment of diseases. The mechanism of Tongxie Yaofang in treating diseases is mainly attributed to anti-inflammation, immune function regulation, intestinal hypersensitivity improvement, emotion regulation, etc. Monoterpene glycosides, flavonoids, chromones, lactones, and other components contained play an important therapeutic role. The research on the systems biology of Tongxie Yaofang, such as metabolomics, proteomics, and network pharmacology, provides a scientific basis for clarifying its mechanism of action and expanding its clinical application. However, there are still some problems to be solved, such as difficulty in combining diseases and syndromes and lack of in-depth systematic research. Through the retrieval and collation of relevant literature, this paper systematically reviewed the material basis, pharmacological effects, and systems biology research of Tongxie Yaofang, aiming to lay a foundation for in-depth research on its mechanism in treating diseases and rational application in clinical practice.
6.Construction of a competing risk model for disease-free survival of patients with non-muscle invasive bladder cancer
Li WANG ; Zihe PENG ; Qidong LUO ; Shanlong HUANG ; Yun SUN ; Min ZHANG ; Luan JIA ; Le ZHAO ; Hongliang LI
Journal of Modern Urology 2023;28(6):487-492
【Objective】 To construct an easy-to-use individual survival prognostic tool based on competing risk analyses to predict the risk of 1-, 2- and 3- year recurrence for patients with non-muscle invasive bladder cancer (NMIBC). 【Methods】 The follow-up data of 419 NMIBC patients were obtained. The patients were randomly divided into training cohort (n=293) and validation cohort (n=126). The variables included age at diagnosis, sex, history of smoking, tumor number, tumor size, histolo-gic grade, pathological stage, and bladder perfusion drug. The cumulative incidence function (CIF) of recurrence was estimated using all variables in the training cohort and potential prognostic variables were determined with Gray’s test. The Fine-Gray subdistribution proportional hazard approach was used as a multivariate competitive risk analysis to identify independent pro-gnostic variables. A competing risk nomogram was developed to predict the recurrence. The performance of the competing risk model was evaluated with the area under the receiver operating characteristic curve (AUC), calibration curve, and Brier score. 【Results】 Five independent prognostic factors including age, number of tumors, tumor size, histologic grade and pathological stage were used to construct the competing risk model. In the validation cohort, the AUC of 1-, 2- and 3- year recurrence were 0.895 (95%CI: 0.831-0.959), 0.861(95%CI: 0.774-0.948) and 0.827(95%CI: 0.721-0.934), respectively, indicating that the model had a high predictive performance. 【Conclusion】 We successfully constructed a competing risk model to predict the risk of 1-, 2- and 3-year recurrence for NMIBC patients. It may help clinicians to improve the postoperative management of patients.
7.Crystal structure of the African swine fever virus structural protein p35 reveals its role for core shell assembly.
Guobang LI ; Dan FU ; Guangshun ZHANG ; Dongming ZHAO ; Mingyu LI ; Xue GENG ; Dongdong SUN ; Yuhui WANG ; Cheng CHEN ; Peng JIAO ; Lin CAO ; Yu GUO ; Zihe RAO
Protein & Cell 2020;11(8):600-605
9.Structural basis of Zika virus helicase in recognizing its substrates.
Hongliang TIAN ; Xiaoyun JI ; Xiaoyun YANG ; Zhongxin ZHANG ; Zuokun LU ; Kailin YANG ; Cheng CHEN ; Qi ZHAO ; Heng CHI ; Zhongyu MU ; Wei XIE ; Zefang WANG ; Huiqiang LOU ; Haitao YANG ; Zihe RAO
Protein & Cell 2016;7(8):562-570
The recent explosive outbreak of Zika virus (ZIKV) infection has been reported in South and Central America and the Caribbean. Neonatal microcephaly associated with ZIKV infection has already caused a public health emergency of international concern. No specific vaccines or drugs are currently available to treat ZIKV infection. The ZIKV helicase, which plays a pivotal role in viral RNA replication, is an attractive target for therapy. We determined the crystal structures of ZIKV helicase-ATP-Mn(2+) and ZIKV helicase-RNA. This is the first structure of any flavivirus helicase bound to ATP. Comparisons with related flavivirus helicases have shown that although the critical P-loop in the active site has variable conformations among different species, it adopts an identical mode to recognize ATP/Mn(2+). The structure of ZIKV helicase-RNA has revealed that upon RNA binding, rotations of the motor domains can cause significant conformational changes. Strikingly, although ZIKV and dengue virus (DENV) apo-helicases share conserved residues for RNA binding, their different manners of motor domain rotations result in distinct individual modes for RNA recognition. It suggests that flavivirus helicases could have evolved a conserved engine to convert chemical energy from nucleoside triphosphate to mechanical energy for RNA unwinding, but different motor domain rotations result in variable RNA recognition modes to adapt to individual viral replication.
Crystallography, X-Ray
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Protein Domains
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RNA Helicases
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chemistry
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RNA, Viral
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chemistry
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Viral Proteins
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chemistry
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Zika Virus
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enzymology
10.Crystal structure of SARS-CoV-2 main protease in complex with protease inhibitor PF-07321332.
Yao ZHAO ; Chao FANG ; Qi ZHANG ; Ruxue ZHANG ; Xiangbo ZHAO ; Yinkai DUAN ; Haofeng WANG ; Yan ZHU ; Lu FENG ; Jinyi ZHAO ; Maolin SHAO ; Xiuna YANG ; Leike ZHANG ; Chao PENG ; Kailin YANG ; Dawei MA ; Zihe RAO ; Haitao YANG
Protein & Cell 2022;13(9):689-693