1.Protein Interaction Network Construction and Biological Pathway Analysis Related to Atherosclerosis.
Quhuan LI ; Shanshan GU ; Na LI ; Zhenyang LI ; Wenlong LAI ; Yang ZENG
Journal of Biomedical Engineering 2015;32(6):1255-1260
Atherosclerosis is a complex disease characterized by lipid accumulation in the vascular wall and influenced by multiple genetic and environmental factors. To understand the mechanisms of molecular regulation related to atherosclerosis better, a protein interaction network was constructed in the present study. Genes were collected in nucleotide database and interactions were downloaded from Biomolecular Object Network Database (BOND). The interactional data were imported into the software Cytoscape to construct the interaction network, and then the degree characteristics of the network were analyzed for Hub proteins. Statistical significance pathways and diseases were figured out by inputting Hub proteins to KOBAS2. 0. The complete pathway network related to atherosclerosis was constructed. The results identified a series of key genes related to atherosclerosis, which would be the potential promising drug targets for effective prevention.
Atherosclerosis
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genetics
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Databases, Factual
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Humans
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Protein Interaction Mapping
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methods
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Protein Interaction Maps
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Software
2.Nucleobindin 2 and its role in tumorigenesis and progression
Yi YANG ; Shanhua MAO ; Zhenyang LI ; Xiaodong GU ; Jianbin XIANG ; Zongyou CHEN
Journal of International Oncology 2014;(7):492-494
Nucleobindin2protein(NUCB2)isanewlydiscoveredneuropeptideprecursorprotein, which has a comprehensive cytology function and is expressed in the hypothalamus nucleus and many peripheral tissues.There aren′t many studies about its signaling pathway,where neuroendocrine regulation,cell survival growth,tumor suppressor,cytokine secretion were found to involve in it.Besides,it has also been confirmed that breast cancer,lung cancer,ovarian cancer and prostate cancer are closely related to NUCB2.Therefore, several downstream pathways of NUCB2 may be related to the formation and progression of tumor.Further stud-ies are still needed to clarify the signal pathways of NUCB2 to provide a reliable basis for clinical cancer preven-tion.
3. Clinical outcomes of peripheral blood stem cell transplantation for aggressive peripheral T-cell lymphoma
Wenrong HUANG ; Zhenyang GU ; Honghua LI ; Jian BO ; Shuhong WANG ; Fei LI ; Xiaoning GAO ; Liping DOU ; Yu ZHAO ; Yu JING ; Haiyan ZHU ; Qunshun WANG ; Li YU ; Chunji GAO ; Daihong LIU
Chinese Journal of Hematology 2018;39(9):729-733
Objective:
To evaluate clinical outcomes of autologous and allogeneic peripheral blood stem cell transplantation (PBSCT) for aggressive peripheral T-cell lymphoma (PTCL).
Methods:
From June 2007 to June 2017, clinical data of PTCL patients who underwent PBSCT were assessed retrospectively.
Results:
Among 41 patients, 30 was male, 11 female, and median age was 38(13-57) years old. Seventeen patients with autologous PBSCT (auto-PBSCT) and 24 patients with allogeneic PBSCT (allo-PBSCT) were enrolled in this study. Eight patients (8/17, 47.1%) in auto-PBSCT group were ALK positive anaplastic large cell lymphoma (ALCL), 7 patients (7/24, 29.2%) with NK/T cell lymphoma and 9 patients (9/24, 37.5%) with PTCL-unspecified (PTCL-U) in allo-PBSCT group (