1. Epidemiological and etiological surveillance study of infectious diarrhea in Shanghai in 2013-2015
Jian LI ; Hao PAN ; Wenjia XIAO ; Xiaohuan GONG ; Yuan ZHUANG ; Xiaozhou KUANG ; Huanyu WU ; Zheng'an YUAN
Chinese Journal of Preventive Medicine 2017;51(12):1113-1117
Objective:
To analyze the pathogen spectrum and epidemiological characters of infectious diarrhea cases in Shanghai from July 2013 to June 2015.
Methods:
From July 2013 to June 2015, using multi-stage sampling to select 22 hospitals as adult diarrhea surveillance sentinels, and 3 district central hospitals together with Shanghai municipal children's hospital as children diarrhea surveillance sentinels. A total of 6 267 diarrhea cases were sampled. The demographic characters, main clinical manifestations and signs of cases were investigated, and stool specimens were collected to conduct the bacteria culture and virus nucleic acid detection. The difference of positive rate of bacteria and virus in different seasons, and age difference of relevant pathogens were compared.
Results:
Among 6 267 cases, 3 262 (52.05%) were male, and most of them were in 50-69 years group (1 999 cases, 31.90%) and 30-49 years group (1 691 cases, 26.98%). Totally, 2 783 positive specimens were detected out of 6 267 specimens with the positive rate being 44.41%. A total of 7 kinds of bacteria and 5 kinds of viruses were detected. The positive rate for bacterium was 12.61%(790 cases), mainly being vibrio parahaemolyticus (256 cases), diarrheagenic E.coli (239 cases) and salmonella (209 cases). The positive rate for virus was 31.80% (1 993 cases), mainly being norovirus (1 172 cases) and rotavirus (546 cases). The positive rates of viruses in winter of 2013 and 2014 were 57.89%(429 cases) and 62.14%(522 cases) respectively, higher than those of bacterium in the same periods which were 2.43% (18 cases) and 2.86% (24 cases) respectively. The positive rates of bacterium in summer of 2013, 2014 and 2015 were 14.56% (97 cases), 25.29%(258 cases) and 21.21% (49 cases), also higher than those of viruses in the same periods which were 7.51% (50 cases), 8.43%(86 cases) and 11.69% (27 cases) respectively, all of the above differences were statistically significant (
2.Epidemiology of confirmed and suspected norovirus outbreaks in Shanghai, 2010-2014
Jian LI ; Hao PAN ; Wenjia XIAO ; Jiayu HU ; Zheng'an YUAN
Chinese Journal of Epidemiology 2015;36(11):1249-1252
Objective To understand the epidemiologic characteristics of confirmed and suspected norovirus outbreaks in Shanghai during 2010-2014.Methods The investigation reports of confirmed and suspected norovirus outbreaks in Shanghai from 2010 to 2014 were analyzed.Results A total of 80 norovirus outbreaks, involving 2 399 cases, were reported during this period, and the overall attack rate was 4.17%.The median of the outbreak duration was 4.5 days and the incidence peaked 2 days later averagety for an outbreak.The outbreaks mainly occurred in autumn and winter,53 outbreaks occurred during October-February, accounting for 66.25%.Seventy five outbreaks occurred in schools, child care settings and nursing houses, accounting for 93.75%.The attack rates in hospitalized patients and the elders in nursing houses were higher than those in pre-school and school aged children, the differences were statistically significant (x2=683.12, P<0.01).The attack rates in medical staff and nurses in hospitals and nursing houses or staff in pre-schools and schools were lower.Vomiting, the main clinical symptom, occurred in 1 900 cases (79.20%), diarrhea and fever developed in 694 cases (28.93%) and 364 cases (15.17%) respectively.The differences were statistically significant (x2 =2 251.48, P<0.01).The outbreaks were mainly caused by short common exposures and contact with cases.Conclusion The surveillance for norovirus infection should be strengthened in hospitals, schools and others with the crowed during autumn-winter.The protection of risk population should be enhanced.
3.Study on treatment outcome and risk factors of multidrug-resistant pulmonary tuberculosis patients in Shanghai
Chenxi NING ; Shiqi ZHANG ; Zheyuan WU ; Jing CHEN ; Zurong ZHANG ; Xin SHEN ; Zheng'an YUAN
Shanghai Journal of Preventive Medicine 2023;35(3):219-223
ObjectiveTo describe the characteristics of treatment outcomes of multidrug-resistant tuberculosis (MDR-TB) patients enrolled in second-line treatment in Shanghai from 2017 to 2018, and to analyze the influencing factors of treatment outcomes. MethodsTotally 182 MDR-TB patients were analyzed by using data collected from the China tuberculosis management information system, the hospital's electronic medical record information system, whole genome sequencing results and a questionnaire survey, and logistic regression analysis was used to analyze the factors affecting the success of treatment. ResultsIn 182 MDR-TB patients, the success rate of treatment was 65.4%, the loss to follow-up rate was 8.2%, the mortality rate was 4.9%, the unassessable rate was 13.7%, and the drug withdrawal rate was 7.7%. The factors affecting the success of treatment in MDR-TB patients included age (35‒ years old, OR=5.28, 95%CI: 1.58‒17.59, P=0.007; 55‒ years old, OR=16.30, 95%CI: 4.36‒60.92, P<0.001) and compliance to medication (OR=0.55, 95%CI: 0.42‒0.72, P<0.001). ConclusionThe treatment success rate of MDR-TB patients in Shanghai from 2017 to 2018 is significantly higher than the average level in China. Older patients and patients with less compliant are at higher risk of adverse treatment outcomes.
4.Genetic characterization of the isolates of measles viruses in Hongkou district of Shanghai, China in 2012.
Shuhua LI ; Xian TANG ; Xiaohua QIAN ; Zheng'an YUAN ; Chongshan LI ; Yanji YANG ; Xiaonan YU ; Xiangzhen GONG
Chinese Journal of Epidemiology 2014;35(4):429-432
OBJECTIVETo ascertain the genotype of measles viruses isolated in 2012 and genetic characterization of measles viruses in Hongkou district of Shanghai during 2000-2012.
METHODSMeasles virus was isolated from throat swab specimens collected from suspected measles cases and 450 bp fragment of C terminus on nucleoprotein (N) gene was amplified by RT-PCR. Sequence analysis was conducted to ascertain the genotype and to compare the difference of nucleotide with other measles virus strain announced by GenBank during 2000-2012. Measles virus genotype was analyzed. Epidemiological investigation was conducted.
RESULTSPhylogenetic analysis showed that 7 measles virus samples were isolated from 34 throat swab specimens with 6 of them belonged to H1 genotype, 1 belonged to D8 genotype of H1 genotype. H1a appeared the main part of Shanghai measles virus. Epidemiological survey showed that D8 was an imported case, also the first case detected since 2000.
CONCLUSIONThe genotype distribution of measles virus in Hongkou was identified the same as elsewhere in Shanghai. D8 was an imported case, detected for the first time since 2000. The results suggested that viral gene sequencing and genotyping should be regularly conducted at the measles laboratories in Shanghai to strengthen the networking monitoring program of the disease.
Adult ; China ; epidemiology ; Female ; Genotype ; Humans ; Infant ; Male ; Measles virus ; genetics ; Phylogeny ; Sequence Analysis, DNA ; Virus Diseases ; genetics