1.Research of autophagy marker molecular LC3-Ⅱ in hepatic ischemia-reperfusion injury
Yubin XU ; Xu'nan MAO ; Peijian ZHANG ; Da LI ; Feng XUE ;
International Journal of Surgery 2016;43(1):54-57
Surgical resection of liver diseases such as liver cancer,traumatic hepatic rupture,it was often faced with ischemia-reperfusion injury of the residual liver,which significantly increased the risk of surgical treatment and impact the postoperative recovery of patients.Autophagy was a way of programmed cell death after hepatic ischemia reperfusion.When researching hepatic ischemia-reperfusion injury simulated by animal experiments,it ofen detected the level change of autophagy marker molecular LC3-Ⅱ representing the activity of cell autophagy.Now the authors write the research progress of LC3-Ⅱ in hepatic ischemia-reperfusion injury.
2.Analysis of risk factors of low cardiac output syndrome after cardiac valvular replacement surgery
Yuqi WU ; Yubin LI ; Bin YU ; Min YU ; Ke ZHANG ; Quanling XUE ; Hong QU
Clinical Medicine of China 2014;30(4):407-410
Objective To find out the risk factors of postoperative low cardiac output syndrome(LCOS) of patients undergoing cardiac valvular surgery in ICU in order to provide basic for prevention and control measures.Methods Ninety-six valve replacement patients with valvular heart disease were enrolled as our subjects and they were hospitalized in ICU of the First People's hospital of Yichang from Jan.2008 to May.2013.The patients postoperative LCOS (Dopamine > 10 μg/(kg · min)) were served as observation group (n =41),and the other were control groups(n =55).All data of the patients were recorded.Non-conditions Logistic regressions analysis were adopted to analyze the independent risk factors which resulted in LCOS undergoing cardiac valvular surgery.Results Of 96 patients undergoing cardiac vavular surgery,41cases (42.7%) had postoperative LCOS.Single factor analysis showed that hepatomegaly (P =0.007),course of diseases ≥ 15 years (P =0.042),cardiopulmonary bypass ≥ 120 min (x2 =3.937,P =0.047),pre-operative cardiac function ≥ Ⅲ degree (P =0.003) were the independent risk factors of postoperative LCOS undergoing cardiac valvular surgery.The Logistic multi factor regression analysis showed that the independent risk factors of postoperative LCOS undergoing cardiac valvular surgery included course of diseases ≥ 15 years (OR =2.825,95% CI =(1.015-7.861)),Pre-operative cardiac function ≥ Ⅲ degree (OR =7.306,95% CI =(2.050-26.035),P=0.002).Conclusion Course of diseases ≥15 years and Pre-operative cardiac function≥ Ⅲ-Ⅳ degree are the independent risk factors of LCOS undergoing cardiac valvular surgery.
3.Blink restoration by the functional electrical stimulation in unilateral facial nerve palsy rabbits.
Yubin XUE ; Guodong FENG ; Xiuyong DING ; Yang ZHAO ; Tingting CUI ; Zhiqiang GAO
Chinese Journal of Otorhinolaryngology Head and Neck Surgery 2014;49(7):586-591
OBJECTIVETocompare the effects of different waveforms and parameters of electrical stimulation to elicit a blink, and construct a functional electrical stimulation (FES) system to restore synchronous blink in unilateral facial nerve palsy (FNP).
METHODSFirstly, twenty-four rabbits were surgically induced unilateral FNP and were divided into three groups, who received square, sine and triangle pulse wareforms, respectirely. Both the healthy and the paralysis eyelids of the rabbits received pulse train stimulation to produce a blink in both eyes. For each rabbit, twenty-seven combinations of frequencies (25 Hz, 50 Hz and 100 Hz) and nine pulse widths (1-9 ms) were stimulated. The threshold amplitude and electric charge to elicit a blink was compared between different waveforms and different parameters. Secondly, a FES system was constructed to treat six surgically induced unilateral FNP rabbit chosen in the twenty-four rabbits, it consisted by an electromyogram (EMG) amplifier module which record the EMG of the healthy muscle, and a stimulator which received the EMG input and output a pulse train stimulation when triggered by the EMG.
RESULTSWhen the carrier frequency of the pulse train was 25 Hz, it was not able to induce a smooth blink. However, when the carrier frequencies were 50 Hz and 100 Hz, a smooth blink could be induced. The voltage required by 100 Hz was lower than 50 Hz, but it cost more electric charge. The amplitude that square waveforms required was far lower than sine and triangle, but the electric charge between the three waveforms was similar. Synchronous blink could be restored in the six unilateral FNP rabbits with the FES system.
CONCLUSIONSTo elicit a blink, square pulse train delivered in 50 Hz is a preferable option. The motion of the healthy eyelids as a source of information for stimulation of the paralyzed sides can restore the synchronous blink in unilateral FNP rabbits.
Animals ; Blinking ; Electric Stimulation ; Electric Stimulation Therapy ; methods ; Electromyography ; Eyelids ; Facial Nerve ; Facial Paralysis ; therapy ; Rabbits
4.Investigation of in-patient neonatal death at 18 hospitals in Henan Province
Huifang DONG ; Wenli LI ; Falin XU ; Deliang LI ; Li LI ; Qingsheng LIU ; Jiuyue LIU ; Haiyan LI ; Xiaobing WANG ; Xiaoyan GUO ; Weixing ZHANG ; Yubin DONG ; Youfeng MA ; Zhansheng WANG ; Xinhua WANG ; Wei XUE ; Shichang ZHANG ; Yanlun ZHANG ; Shuping CHEN ; Xicheng WANG
Chinese Journal of Perinatal Medicine 2019;22(6):412-419
Objective To investigate the situation and the causes of neonatal death in Henan Province.Methods This study retrospectively analyzed the clinical data of 277 neonates who died at 18 hospitals in Henan Province in 2017.Distribution and causes of neonatal deaths,differences between perinatal conditions of premature and term/post-term infants,causes of early (< 7 d) and late (7-28 d) neonatal deaths and the differences in neonatal death cases between Maternal and Child Health Care Hospitals and General/Children's Hospitals were analyzed.We used t,rank-sum and Chi-square test (or corrected Chi-square test,or Fisher's exact test) for statistical analysis.Results (1) A total of 50 993 newboms were admitted to the 18 hospitals in 2017,297 of which died with a mortality of 5.82‰.After excluding 20 cases with uncertain birth or maternal pregnancy history or clinical data,277 cases with complete data were analyzed.Among them,168 (60.6%) were preterm neonates and 109 (39.4%) were term/post-term ones.Early and late neonatal deaths accounted for 74.0% (205 cases) and 26.0% (72 cases),respectively.(2) The top five causes of neonatal deaths were infection (78 cases,28.2%),asphyxia (54 cases,19.5%),neonatal respiratory distress syndrome (NRDS,33 cases,11.9%),severe congenital malformations (26 cases,9.4%) including cyanotic congenital heart diseases,digestive malformations,airway malformations and neural tube defects and pulmonary hemorrhage (23 cases,8.3%).Among them,the top three causes of early neonatal deaths were asphyxia (48 cases,23.4%),infection (43 cases,21.0%) and NRDS (33 cases,16.1%),while the main causes of late neonatal deaths were infection (35 cases,48.6%),major congenital malformations (9 cases,12.5%) and chromosome abnormities/inherited metabolic diseases (7 cases,9.7%).(3) Maternal complications during pregnancy accounted for 79.1% (219 cases) and the predominant types were pregnancy-induced hypertension (43 cases,19.6%),followed by infection (36 cases,16.4%),placental-related conditions (32 cases,14.6%),gestational diabetes mellitus (23 cases,10.5%),hypothyroidism (20 cases,9.1%),fetal distress (18,8.2%),twin-twin transfusion syndrome (10 cases,4.6%) and cholestasis syndrome (9 cases,4.1%).(4) Compared with the term/post-term cases,the preterm cases had higher proportions of multiple births [27.4% (46/168) vs 6.4% (9/109),x2=14.016,P < 0.05],assisted reproduction [7.1% (12/168) vs 0.9% (1/109),x2=4.421,P < 0.05] and maternal hypertensive disorders of pregnancy [21.4% (36/1 68) vs 6.4% (7/109),x2=11.353,P < 0.05],infection [16.7% (28/168) vs 7.3% (8/109),x2=4.295,P < 0.05] and twin-to-twin transfusion syndrome [6.0% (10/168) vs 0.0% (0/109),x2=6.707,P < 0.05].(5) Among all the early neonatal deaths,preterm cases had a higher incidence of NRDS than term/post-term neonates [20.3% (27/133) vs 8.3% (6/72),x2=1 1.937,P < 0.05],but lower incidence of meconium aspiration syndrome (MAS),severe congenital malformations and chromosome abnormalities/inherited metabolic diseases [0.8% (1/133) vs 5.6% (4/72),x2=4.508;3.8% (5/133) vs 16.7% (12/72),x2=10.233;1.5% (2/133) vs 6.9% (5/72),~=4.172;all P < 0.05].Among the late neonatal deaths,the incidence of severe intracranial hemorrhage in preterm infants was higher than that in term/post-term neonates [7.1% (3/42) vs 0.0% (0/30),x2=2.205,P < 0.05].(6) Compared with the cases in General/Children's Hospitals,those in Maternal and Child Health Care Hospitals showed a higher proportion of preterm neonatal deaths [67.3% (105/156) vs 52.1% (63/121),x2=6.010,P < 0.05],younger gestational age [(32.8±5.3) weeks vs (34.6±4.9) weeks,t=3.072,P < 0.05],lower birth weight [(2 132.6± 1 014.5) g vs (2 409.4±987.3) g,t=-2.513,P < 0.05],and higher average age of death [M(P25-P75),3 (1-8) d vs 2 (1-4) d,Z=3.710,P < 0.05].Conclusions Neonatal death occurs mainly within one week after birth in those with maternal complications.Late preterm deaths and term/post-term cases account for nearly half of total neonatal deaths.The causes of death for preterm and term/post-term newborns vary with postnatal age.Infection,asphyxia and severe congenital malformations are important causes of neonatal deaths.
5.Membrane-camouflaged supramolecular nanoparticles for co-delivery of chemotherapeutic and molecular-targeted drugs with siRNA against patient-derived pancreatic carcinoma.
Honglin TANG ; Yanan XUE ; Bowen LI ; Xiaojie XU ; Fu ZHANG ; Jiajing GUO ; Qijun LI ; Tingting YUAN ; Yuan CHEN ; Yubin PAN ; Yuan PING ; Da LI
Acta Pharmaceutica Sinica B 2022;12(8):3410-3426
Pancreatic cancer remains one of the most lethal malignancies worldwide. The combination of the first-line standard agent gemcitabine (GEM) with the molecular-targeted drug erlotinib (Er) has emerged as a promising strategy for pancreatic cancer treatment. However, the clinical benefit from this combination is still far from satisfactory due to the unfavorable drug antagonism and the fibrotic tumor microenvironment. Herein, we propose a membrane-camouflaged dual stimuli-responsive delivery system for the co-delivery of GEM and Er into pancreatic cancer cells and tissues to block the antagonism, as well as reshapes profibrotic tumor microenvironment via simultaneous delivery of small interference RNA (siRNA) for synergistic pancreatic cancer treatment. This "all-in-one" delivery system exhibits sensitive GSH and pH-dependent drug release profiles and enhances the inhibitory effects on the proliferation and migration of tumor cells in vitro. Excitingly, the systemic injection of such a biomimetic drug co-delivery system not only resulted in superior inhibitory effects against orthotopic pancreatic tumor and patient-derived tumor (PDX), but also greatly extended the survival rate of tumor-bearing mice. Our findings provide a promising therapeutic strategy against pancreatic cancer through the enhanced synergistic effect of target therapy, chemotherapy and anti-fibrotic therapy, which represents an appealing way for pancreatic cancer treatment.
6. Analysis of clinical effect of nasal endoscope-assisted nasal columella approach for simultaneous correction of nasal septum deviation and crooked nose deformity
Chun YANG ; Zhaohui SHI ; Jian WANG ; Min XU ; Yubin LAI ; Tao XUE ; Fuquan CHEN ; Dingjun ZHA ; Xiaodong CHEN
Journal of Clinical Otorhinolaryngology Head and Neck Surgery 2021;35(8):723-727
7.DeepNitro: Prediction of Protein Nitration and Nitrosylation Sites by Deep Learning.
Yubin XIE ; Xiaotong LUO ; Yupeng LI ; Li CHEN ; Wenbin MA ; Junjiu HUANG ; Jun CUI ; Yong ZHAO ; Yu XUE ; Zhixiang ZUO ; Jian REN
Genomics, Proteomics & Bioinformatics 2018;16(4):294-306
Protein nitration and nitrosylation are essential post-translational modifications (PTMs) involved in many fundamental cellular processes. Recent studies have revealed that excessive levels of nitration and nitrosylation in some critical proteins are linked to numerous chronic diseases. Therefore, the identification of substrates that undergo such modifications in a site-specific manner is an important research topic in the community and will provide candidates for targeted therapy. In this study, we aimed to develop a computational tool for predicting nitration and nitrosylation sites in proteins. We first constructed four types of encoding features, including positional amino acid distributions, sequence contextual dependencies, physicochemical properties, and position-specific scoring features, to represent the modified residues. Based on these encoding features, we established a predictor called DeepNitro using deep learning methods for predicting protein nitration and nitrosylation. Using n-fold cross-validation, our evaluation shows great AUC values for DeepNitro, 0.65 for tyrosine nitration, 0.80 for tryptophan nitration, and 0.70 for cysteine nitrosylation, respectively, demonstrating the robustness and reliability of our tool. Also, when tested in the independent dataset, DeepNitro is substantially superior to other similar tools with a 7%-42% improvement in the prediction performance. Taken together, the application of deep learning method and novel encoding schemes, especially the position-specific scoring feature, greatly improves the accuracy of nitration and nitrosylation site prediction and may facilitate the prediction of other PTM sites. DeepNitro is implemented in JAVA and PHP and is freely available for academic research at http://deepnitro.renlab.org.
Amino Acid Sequence
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Amino Acids
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metabolism
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Deep Learning
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Humans
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Internet
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Neural Networks (Computer)
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Nitrosation
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Proteins
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chemistry
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metabolism
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Reproducibility of Results
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Software