1.Analysis of blood culture data in Korea: bacterial distribution and cumulative antimicrobial resistance (2016–2020)
Yiel Hea SEO ; Daewon KIM ; Hwan Tae LEE ; Ja Young SEO ; Jeong Yeal AHN ; Pil Whan PARK
Annals of Clinical Microbiology 2023;26(4):147-157
Background:
The distribution of bacteria isolated from bloodstream infections and cumulative antimicrobial susceptibility data are the basis for empirical decisions regarding antibiotics as an initial treatment. Therefore, it is important to consistently collect blood culture results of individual patients and analyze them correctly.
Methods:
The blood culture results of patients at a university hospital from 2016 to 2020 were analyzed retrospectively to determine the bacterial distributions and antibiotic resistance patterns. Duplicates were eliminated by including only the first isolate of each species per patient.
Results:
Escherichia coli (27.1%) was the most commonly isolated bacterium from blood cultures, followed by Klebsiella pneumoniae (10.1%) and Staphylococcus aureus (8.6%). The methicillin resistance rate of S. aureus was 49.2%, and the vancomycin resistance rate of Enterococcus faecium was 39.5%; with no significant changes over the study period. The cefotaxime, ciprofloxacin, and ertapenem resistance rates of E. coli were 35.0%, 46.8%, and 0.7%, respectively. Seventeen carbapenem-resistant E. coli strains were isolated, of which 11 produced carbapenemase. The cefotaxime, ciprofloxacin, and ertapenem resistance rates of K. pneumoniae were 29.5%, 31.7%, and 5.4%, respectively. Forty-eight carbapenem-resistant K. pneumoniae strains were isolated, of which 37 produced carbapenemase. The imipenem resistance rates of Acinetobacter baumannii and Pseudomonas aeruginosa were 72.3% and 23.4%, respectively.
Conclusion
In the blood culture results from 2016 to 2020, the isolation frequency of E.coli, K. pneumoniae, and E. faecium showed an increasing trend, whereas that of S. aureus was stable. Over the 5 year study period, the ciprofloxacin resistance rate of E. coli and P.aeruginosa and ampicillin/sulbactam resistance rate of A. baumannii significantly increased.
2.Genotypic and Phenotypic Characteristics of Hereditary Leiomyomatosis and Renal Cell Cancer Syndrome in Korean Patients
Ja Young SEO ; Jeong-Yeal AHN ; Bhumsuk KEAM ; Miso KIM ; Shinkyo YOON ; Jae Lyun LEE ; Kwonoh PARK ; Inkeun PARK
Annals of Laboratory Medicine 2021;41(2):207-213
Background:
Hereditary leiomyomatosis and renal cell cancer (HLRCC) is an autosomal dominant cancer predisposition syndrome. HLRCC is characterized by the development of cutaneous leiomyomas, early-onset uterine leiomyomas, and HLRCC-associated renal cell cancer (RCC) and caused by germline fumarate hydratase (FH) deficiency. We investigated the genotypic and phenotypic characteristics of Korean patients with HLRCC.
Methods:
We performed direct sequencing analysis of FH in 13 patients with suspected HLRCC and their family members. A chromosomal microarray test was performed in female patients with negative sequencing results but highly suspected HLRCC. In addition, we analyzed the clinical characteristics and evaluated the genotype–phenotype correlations in Korean patients with HLRCC.
Results:
We identified six different pathogenic or likely pathogenic FH variants in six of the 13 patients (46.2%). The variants included two nonsense variants, two splicing variants, one frameshift variant, and one missense variant. Of the six variants, two (33.3%) were novel (c.132+1G > C, and c.243dup). RCC and early-onset uterine leiomyoma were frequently observed in families with HLRCC, while cutaneous leiomyoma was less common. No significant genotype–phenotype correlation was observed.
Conclusions
We describe the genotypic and phenotypic spectrum in a small series of Korean patients with HLRCC. Our data reveal the unique characteristics of Korean patients with HLRCC and suggest a need for establishing an optimal diagnostic approach for them.
3.Transfusion in RhD Mismatch Hematopoietic Stem Cell Transplantation
Daewon KIM ; Kyung-Hee KIM ; Yiel-Hea SEO ; Pil-Whan PARK ; Jeong-Yeal AHN ; Ja Young SEO
Korean Journal of Blood Transfusion 2020;31(2):159-164
In some cases, hematopoietic stem cell transplants (HSCT) show differences in the D antigen. In previous studies, there have been few cases of de novo anti-D alloimmunization, and even rarer cases of serious side effects or the outcomes. De novo anti-D alloimmunization has been reported to occur more frequently in minor D mismatch than in major D mismatch. For the RhD type of blood components, RhD-negative type is recommended in transfusion in RhD mismatch HSCT without anti-D in donors and recipients. But in situations of insufficient RhD-negative blood supply, this study suggests that the RhD type of blood components depends on the patients’ RhD type before transplantation, and it depends on the donors’ RhD type after transplantation, and an RhD-positive platelet transfusion may be available.
4.Performance of Copeptin for Early Diagnosis of Acute Myocardial Infarction in an Emergency Department Setting
Ji Hun JEONG ; Yiel Hea SEO ; Jeong Yeal AHN ; Kyung Hee KIM ; Ja Young SEO ; Ka Yeong CHUN ; Yong Su LIM ; Pil Whan PARK
Annals of Laboratory Medicine 2020;40(1):7-14
BACKGROUND:
Rapid and accurate diagnosis of acute myocardial infarction (AMI) is critical for initiating effective treatment and achieving better prognosis. We investigated the performance of copeptin for early diagnosis of AMI, in comparison with creatine kinase myocardial band (CK-MB) and troponin I (TnI).
METHODS:
We prospectively enrolled 271 patients presenting with chest pain (within six hours of onset), suggestive of acute coronary syndrome, at an emergency department (ED). Serum CK-MB, TnI, and copeptin levels were measured. The diagnostic performance of CK-MB, TnI, and copeptin, alone and in combination, for AMI was assessed by ROC curve analysis by comparing the area under the curve (AUC). Sensitivity, specificity, negative predictive value, and positive predictive value of each marker were obtained, and the characteristics of each marker were analyzed.
RESULTS:
The patients were diagnosed as having ST elevation myocardial infarction (STEMI; N=43), non-ST elevation myocardial infarction (NSTEMI; N=25), unstable angina (N=78), or other diseases (N=125). AUC comparisons showed copeptin had significantly better diagnostic performance than TnI in patients with chest pain within two hours of onset (AMI: P=0.022, ≤1 hour; STEMI: P=0.017, ≤1 hour and P=0.010, ≤2 hours). In addition, TnI and copeptin in combination exhibited significantly better diagnostic performance than CK-MB plus TnI in AMI and STEMI patients.
CONCLUSIONS
The combination of TnI and copeptin improves AMI diagnostic performance in patients with early-onset chest pain in an ED setting.
5.Performance Evaluation of the Preanalytic Module of the ACL TOP 750 Hemostasis Lab System.
Woo Jae KWOUN ; Jeong Yeal AHN ; Pil Whan PARK ; Yiel Hea SEO ; Kyung Hee KIM ; Ja Young SEO ; Ji Hun JEONG ; Hwan Tae LEE
Annals of Laboratory Medicine 2018;38(5):484-486
No abstract available.
Hemostasis*
6.The 2016 WHO versus 2008 WHO Criteria for the Diagnosis of Chronic Myelomonocytic Leukemia.
Yeonsook MOON ; Mi Hyang KIM ; Hye Ryoun KIM ; Jeong Yeal AHN ; Jungwon HUH ; Ji Young HUH ; Jae Ho HAN ; Joon Seong PARK ; Sung Ran CHO
Annals of Laboratory Medicine 2018;38(5):481-483
The 2016 WHO diagnostic criteria for chronic myelomonocytic leukemia (CMML) require both absolute and relative monocytosis (≥1×10⁹/L and ≥10% of white blood cell counts) in peripheral blood. Moreover, myeloproliferative neoplasm (MPN) features in bone marrow and/or MPN-associated mutations tend to support MPN with monocytosis rather than CMML. We assessed the impact of the 2016 WHO criteria on CMML diagnosis, compared with the 2008 WHO criteria, through a retrospective review of the medical records of 38 CMML patients diagnosed according to the 2008 WHO classification. Application of the 2016 WHO criteria resulted in the exclusion of three (8%) patients who did not fulfill the relative monocytosis criterion and eight (21%) patients with an MPN-associated mutation. These 11 patients formed the 2016 WHO others group; the remaining 27 formed the 2016 WHO CMML group. The significant difference in the platelet count and monocyte percentage between the two groups indicated that the 2016 WHO criteria lead to a more homogenous and improved definition of CMML compared with the 2008 WHO criteria, which may have led to over-diagnosis of CMML. More widespread use of molecular tests and more sophisticated clinical and morphological evaluations are necessary to diagnose CMML accurately.
Bone Marrow
;
Classification
;
Diagnosis*
;
Humans
;
Leukemia, Myelomonocytic, Chronic*
;
Leukocytes
;
Medical Records
;
Monocytes
;
Platelet Count
;
Retrospective Studies
7.Eosinophilic Meningitis after Bovine Graft Duraplasty for Arnold-Chiari Malformation Type 1 in a 33-year-old Man.
Hwan Tae LEE ; Pil Whan PARK ; Yiel Hea SEO ; Kyung Hee KIM ; Ja Young SEO ; Ji Hun JEONG ; Moon Jin KIM ; Jeong Yeal AHN
Laboratory Medicine Online 2017;7(1):34-36
Cases of pediatric eosinophilic meningitis following duraplasty with a bovine graft have been reported. These patients recovered following the surgical removal of the dural graft or steroid therapy. Decompression for Chiari malformation is a common procedure in both pediatric and adult neurosurgery. We describe the case of a 33-yr-old male patient with eosinophilic meningitis following Chiari decompression via bovine graft duraplasty. Cerebrospinal fluid (CSF) study showed 49 red blood cells/μL and 129 leukocytes/μL with 17% eosinophils. There was no evidence of infectious disease. To our knowledge, this is the first report of adult eosinophilic meningitis after bovine graft duraplasty in Korea.
Adult*
;
Arnold-Chiari Malformation*
;
Cerebrospinal Fluid
;
Communicable Diseases
;
Decompression
;
Eosinophils*
;
Humans
;
Korea
;
Male
;
Meningitis*
;
Neurosurgery
;
Transplants*
8.Multiple Brain Abscesses Caused by Nocardia asiatica in a Patient With Systemic Lupus Erythematosus: The First Case Report and Literature Review.
Ji Hun JEONG ; Song Mi MOON ; Pil Whan PARK ; Jeong Yeal AHN ; Kyung Hee KIM ; Ja Young SEO ; Hwan Tae LEE ; Kwoun Woo JAE ; Yiel Hea SEO
Annals of Laboratory Medicine 2017;37(5):459-461
No abstract available.
Brain Abscess*
;
Humans
;
Lupus Erythematosus, Systemic*
;
Nocardia*
9.Analysis of Blood Culture Data at a Tertiary University Hospital, 2006-2015.
Yiel Hea SEO ; Ji Hun JEONG ; Hwan Tae LEE ; Woo Jae KWOUN ; Pil Whan PARK ; Jeong Yeal AHN ; Kyung Hee KIM ; Ja Young SEO
Annals of Clinical Microbiology 2017;20(2):35-41
BACKGROUND: Cumulative blood culture data provide clinicians with important information in the selection of empiric therapy for blood stream infections. METHODS: We retrospectively analyzed blood culture data from a university hospital during the period from 2006 to 2015. Only the initial isolates of a given species for each patient were included. RESULTS: The number of blood cultures per 1,000 inpatient-days increased from 64 in 2006 to 117 in 2015. The ratio of significant pathogens to total isolates was 0.56-0.63. The most common organisms were Escherichia coli in 2006-2010 but changed to coagulase-negative staphylococci (CoNS) in 2011. The proportion of Staphylococci aureus was decreased during the study period, but Klebsiella pneumoniae was increased. Enterococci were increased, especially E. faecium, which was more frequently isolated than E. faecalis in 2015. Pseudomonas aeruginosa was decreased during the study, but Acinetobacter baumannii was increased. The prevalence of methicillin-resistant S. aureus (MRSA) changed from 62.2% to 53.9%, while vancomycin-resistant E. faecium increased to 35.8%. Extended-spectrum beta-lactamase (ESBL)-producing E. coli and K. pneumoniae increased to 25% and 34%, respectively, in 2015. Starting in 2008, three E. coli and 11 K. pneumoniae isolates were carbapenem-resistant Enterobacteriaceae (CRE), and three were carbapenemase-producing Enterobacteriaceae (CPE). The prevalence of imipenem-resistant A. baumannii rapidly increased during the study period. CONCLUSION: About 60% of all blood isolates were significant pathogens. The most common isolates changed from E. coli to CoNS in 2011. ESBL-producing E. coli and K. pneumoniae, vancomycin-resistant E. faecium, and imipenem-resistant A. baumannii were increased during the study, while the proportion of MRSA tended to decrease slightly. Of the total isolates, 14 were CRE, and 3 were CPE.
Acinetobacter baumannii
;
Bacteremia
;
beta-Lactamases
;
Enterobacteriaceae
;
Escherichia coli
;
Humans
;
Klebsiella pneumoniae
;
Methicillin Resistance
;
Methicillin-Resistant Staphylococcus aureus
;
Pneumonia
;
Prevalence
;
Pseudomonas aeruginosa
;
Retrospective Studies
;
Rivers
10.Screening PCR Versus Sanger Sequencing: Detection of CALR Mutations in Patients With Thrombocytosis.
Ji Hun JEONG ; Hwan Tae LEE ; Ja Young SEO ; Yiel Hea SEO ; Kyung Hee KIM ; Moon Jin KIM ; Jae Hoon LEE ; Jinny PARK ; Jun Shik HONG ; Pil Whan PARK ; Jeong Yeal AHN
Annals of Laboratory Medicine 2016;36(4):291-299
BACKGROUND: Mutations in calreticulin (CALR) have been reported to be key markers in the molecular diagnosis of myeloid proliferative neoplasms. In most previous reports, CALR mutations were analyzed by using Sanger sequencing. Here, we report a new, rapid, and convenient system for screening CALR mutations without sequencing. METHODS: Eighty-three bone marrow samples were obtained from 81 patients with thrombocytosis. PCR primers were designed to detect wild-type CALR (product: 357 bp) and CALR with type 1 (product: 302 bp) and type 2 mutations (product: 272 bp) in one reaction. The results were confirmed by Sanger sequencing and compared with results from fragment analysis. RESULTS: The minimum detection limit of the screening PCR was 10 ng for type 1, 1 ng for type 2, and 0.1 ng for cases with both mutations. CALR type 1 and type 2 mutants were detected with screening PCR with a maximal analytical sensitivity of 3.2% and <0.8%, respectively. The screening PCR detected 94.1% (16/17) of mutation cases and showed concordant results with sequencing in the cases of type 1 and type 2 mutations. Sanger sequencing identified one novel mutation (c.1123_1132delinsTGC). Compared with sequencing, the screening PCR showed 94.1% sensitivity, 100.0% specificity, 100.0% positive predictive value, and 98.5% negative predictive value. Compared with fragment analysis, the screening PCR presented 88.9% sensitivity and 100.0% specificity. CONCLUSIONS: This screening PCR is a rapid, sensitive, and cost-effective method for the detection of major CALR mutations.
Adult
;
Aged
;
Base Sequence
;
Bone Marrow/metabolism
;
Calreticulin/chemistry/*genetics/metabolism
;
DNA Mutational Analysis
;
Female
;
Follow-Up Studies
;
Genotype
;
Humans
;
Janus Kinase 2/chemistry/genetics/metabolism
;
Male
;
Middle Aged
;
Mutation
;
Myeloproliferative Disorders/complications/*diagnosis/genetics
;
Polymerase Chain Reaction
;
Thrombocytosis/complications/*diagnosis

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