2.Analysis of clinical characteristics and JAK2V617F mutation of Tibetan people living at high altitudes with polycythemia.
Di-jiao TANG ; Yuan-xin YE ; Jun LI
Chinese Journal of Hematology 2012;33(11):960-962
Adult
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Altitude
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Asian Continental Ancestry Group
;
genetics
;
Female
;
Humans
;
Janus Kinase 2
;
genetics
;
Male
;
Middle Aged
;
Mutation
;
Polycythemia
;
diagnosis
;
ethnology
;
genetics
3.Chang on saliva manganese, serum manganese and urine manganese in welders.
Xu-Qin DU ; Di-Xin WANG ; Li-Jun NIU
Chinese Journal of Industrial Hygiene and Occupational Diseases 2007;25(12):744-746
Adolescent
;
Adult
;
Air Pollutants, Occupational
;
blood
;
metabolism
;
urine
;
Humans
;
Male
;
Manganese
;
blood
;
metabolism
;
urine
;
Middle Aged
;
Saliva
;
chemistry
;
Welding
;
Young Adult
4.Evolutionary relationships of G3 GARV isolated from pigs and humans in Lulong County, Hebei Province, China.
Yan-Qing GUO ; Jing-Yao XIANG ; Xin MA ; Dan-Di LI ; Zhao-Jun DUAN
Chinese Journal of Virology 2014;30(4):417-422
This study aimed to amplify major genome segments (VP7, VP4, VP6, VP2 and NSP2-5) of porcine G3 group A rotavirus (GARV) LLZ212 isolated in our laboratory, determine their genotypes, and explore the evolutionary relationships between G3 GARV strains isolated from humans and pigs in Lulong County, Hebei Province, China. Major genome segments of seven GARV strains were amplified by reverse transcription-polymerase chain reaction (RT-PCR) and the segments were sequenced. The genome segments of seven GARV strains were determined by the online RotaC genotyping tool (RotaC v2.0). The reference sequences of each GARV genome segment were downloaded from GenBank. Homology and phylogenetic evolutionary analyses were conducted using the MEGA 5.0 and DNAStar software packages. LLZ212 isolated from pigs in Lulong had the following genotype: G3-P[8]-I5-C1-N1-T1-E1-H1. All human GARV strains had the following genotype: G3-P[8]-I1-C1-N1-T1-E1-H1. The VP7, VP4, NSP4 and NSP5 genes of the LLZ212 strain had the highest nucleotide identities with the human GARV E885, CMH014/07, Wa and RMC321 strains, respectively, and these clustered together in a sublineage. The VP6, NSP4 and NSP5 genes of the LLZ212 strain shared the highest nucleotide identities with the porcine GARV PRG921 strain, while VP2 associated most closely with porcine GARV OSU strain, and these also clustered in a sublineage. A rare porcine G3-P[8]-I5-C1-N1-T1-E1-H1 GARV strain was identified, which may represent a reassortment between porcine and human viruses. In conclusion, the VP7, VP4, NSP4 and NSP5 genes of LLZ212 share high levels of sequence identity with human GARV, while VP2, VP6, NSP2 and NSP3 cluster with porcine GARV.
Animals
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Capsid Proteins
;
genetics
;
Child, Preschool
;
China
;
epidemiology
;
Evolution, Molecular
;
Genotype
;
Humans
;
Infant
;
Male
;
Molecular Sequence Data
;
Phylogeny
;
Rotavirus
;
classification
;
genetics
;
isolation & purification
;
Rotavirus Infections
;
epidemiology
;
veterinary
;
virology
;
Swine
;
Swine Diseases
;
epidemiology
;
virology
;
Viral Nonstructural Proteins
;
genetics
5.Research progress in receptors involved in rotavirus infection.
Xin MA ; Dan-Di LI ; Xiu-Ping LI ; Zhao-Jun DUAN
Chinese Journal of Virology 2014;30(3):303-309
Rotaviruses, which are recognized as one of the major etiological agents among infants and young children with diarrhea, consist of three concentric layers of protein capsid with the enclosed double-stranded RNA genome. Rotaviruses infect host cells mainly by identifying the specific receptors on cell surfaces and binding to them. Therefore, receptors are important factors for viruses infecting cells. So far, there have been many receptors found to be involved in rotavirus infection, including sialic acid, integrin, Toll-like receptor, and blood group antigen. This article provides an overview of receptors involved in rotavirus infection.
Animals
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Humans
;
Receptors, Virus
;
genetics
;
metabolism
;
Rotavirus
;
genetics
;
physiology
;
Rotavirus Infections
;
genetics
;
metabolism
;
virology
6.Etiological study of human bocavirus 1-4 in children with acute diarrhea in Lanzhou, China.
Jing-Yao XIANG ; Dan-Di LI ; Xin MA ; Yan-Qing GUO ; Zhao-Jun DUAN ; Yu-Ning LI
Chinese Journal of Virology 2014;30(4):402-407
This study aimed to study the epidemiological and clinical characteristics of human bocavirus 1-4 (HBoV1-4) in children with acute diarrhea in Lanzhou and to investigate the association between HBoV and acute gastroenteritis. A total of 331 stool samples were collected from children aged under 5 years with acute diarrhea at the Department of Pediatrics, the First Hospital, Lanzhou University, between July 2012 and June 2013. Nested PCR was used to screen for HBoV and a general PCR was employed to screen other common diarrhea viruses. We found human bocavirus 1, 2, 3 and 4 in 26, 15, 7 and 1 cases, respectively. There was no specific seasonal distribution of HBoV, with infections occurring throughout the year. HBoV was mostly found in children aged between 7 and 12 months, with a mean age of 11.04 months (+/- 6.92 months), and 93.88% of affected children were aged under 2 years. Overall, 71.3% of mixed infections were mixed and the majority of other infections were caused by rotavirus. There was no statistical difference in the incidence of fever and vomiting associated with HBoV infection. A rare virus strain, HBoV4 (LZFB086), was identified, which showed highest levels of nucleotide sequence identity (99.0%) with a single Thai HBoV strain (JQ267789). No case of HBoV2B was found. In conclusion, HBoV1 was a major etiological pathogen of HBoV in pediatric cases in Lanzhou. HBoV4 was detected in feces for the first time in China. The rate of mixed infections was high and rotavirus was dominant. The data presented suggests that HBoV is not a major causative agent of gastroenteritis.
China
;
epidemiology
;
Diarrhea
;
epidemiology
;
virology
;
Feces
;
virology
;
Human bocavirus
;
classification
;
genetics
;
isolation & purification
;
Humans
;
Infant
;
Molecular Sequence Data
;
Parvoviridae Infections
;
epidemiology
;
virology
;
Phylogeny
;
Seasons
7.Whole genome analysis of human group A rotavirus G9p8 strains in Hebei lulong region, 2009-2011.
Xin MA ; Dan-Di LI ; Yan-Qing GUO ; Jing-Yao XIANG ; Xiu-Ping LI ; Zhao-Jun DUAN
Chinese Journal of Virology 2014;30(2):119-127
Abstract:This study aims to investigate the genetic characteristics of group A rotavirus (GARV) G9P[8] strains from infantile diarrhea samples in Hebei Lulong region from 2009 to 2011. We randomly selected five GARV G9P[8] strains in Hebei Lulong region from 2009 to 2011, amplified the 11 gene fragments of GARVs by RT-PCR, and analyz their full-genome sequences by homology and phylogenetic analysis with DNAStar and MEGA. The nucleotide homology between strains LL11131077 and LL11131083 in 2011 was significantly higher than hat etween them and the other three strains in 2009 and 2010. The G9P[8] GARVs circulating in Hebei Lulong region from 2009 to 2011 elenged to the same genotype as the prevalent G9P[8] GARVs in other parts of the world. However,the two strains in 2011, compared with those in 2009 and 2010, were located in a different sub-branch of the phylogenetic tree and had amino acid mutations at many sites.
China
;
Feces
;
virology
;
Genome, Viral
;
Genotype
;
Humans
;
Molecular Sequence Data
;
Phylogeny
;
Rotavirus
;
classification
;
genetics
;
isolation & purification
;
Rotavirus Infections
;
virology
;
Viral Proteins
;
genetics
8.Co-expression of PPV VP2 and LTB on the Surface of Lactobacillus casei
Xiang-Qing WANG ; Di OU ; An-Qi REN ; Jun-Wei GE ; Xin-Yuan QIAO ; Li-Jie TANG ; Yi-Jing LI ;
Microbiology 2008;0(10):-
Lactobacillus casei was selected as an antigen delivery vehicle for the development of oral vaccine to express recombinant LTB and porcine parvovirus (PPV) VP2 protein. The fusion protein gene encoding PPV VP2 protein and LTB, was cloned into the surface expression vector pPG, and then the recombinant expression vector pPG-VP2-LTB was electrotransformed into Lactobacillus casei 393, generating recombinant strain pPG-VP2-LTB/L. casei 393. After induced by 2% Lactose in MRS broth, an about 78 kD protein was detected in the recombinant Lactobacillus casei by SDS-PAGE. The result of Western blot indicated that the protein possessed the antigenic specificity same as the native virus protein. The result of the whole bacteria cell ELISA indicated that the LTB protein was expressed at the same time. The results of indirect immunofluorescence test and immuno-gold electron microscopy showed that the interest protein was expressed on the surface of L. casei 393. The results provide potential for the development of lactic acid bacteria oral vaccine of PPV, which used LTB as mucosal adjuvant.
9.Study on the construction of standard D1S549 allelic ladder via molecular cloning and its genetic polymorphism in Chinese three populations.
Lin ZHANG ; Jun Ping XIN ; Guo Di CHEN ; Xin TIAN ; Miao LIAO ; Rong Hua LI
Journal of Forensic Medicine 2001;17(3):148-151
OBJECTIVE:
To resolve the problem of the accuracy and standardization of STR-PCR typing in forensic practice, we have designed a new method to produce standard D1S549 allelic ladder.
METHODS:
Eight different PCR amplified D1S549 allelic fragments were isolated from the gel, eluted into the distilled water and re-amplified by PCR. The purified allelic fragments were then blunt-end subcloned individually into the pUC plasmid vectors and transfected into competent E. coli DH5 alpha cells.
RESULTS:
The sequencing results confirmed that the size and the construe of the inserts were correct. The recombinant plasmids DNA with 8 inserts were then used as templates for re-amplification to generate D1S549 standard ladder, with which the genetic polymorphisms of D1S549 locus in Chinese Han population in chengdu, Hui population in Gansu and Wei population in Xinjiang were studied.
CONCLUSION
The results showed that the standard ladder made via this method is excellent, and D1S549 locus is robust for genetic research and forensic application.
Alleles
;
China
;
Cloning, Molecular
;
Forensic Medicine
;
Gene Frequency
;
Genetics, Population
;
Humans
;
Polymerase Chain Reaction
;
Polymorphism, Genetic
;
Tandem Repeat Sequences/genetics*
10.Formalin-induced pain enhanced nitric oxide synthase expression and nitric oxide production in the rat hippocampus.
Ling-Yun LIU ; Di WU ; Qing-Jun LI ; Wen-Bin LI ; Xin-Hua GUO
Chinese Journal of Applied Physiology 2007;23(1):30-34
AIMTo observe the changes of nitric oxide synthase (NOS) activity and nitric oxide (NO) content of hippocampus including their time course and region distribution character in rat during the process of formalin-induced inflammatory pain as well as the pain behavior of rat.
METHODSThe pain threshold (PT) was determined by radiant heat-induced tail flick test. NOS expression in the hippocampus was determined by using NADPH-d histochemical staining. NO production in hippocampus was determined by assaying NO3- and NO2-.
RESULTSSubcutaneous injection of formalin elicited nociceptive behavioural response and led to decrease in PT of rat. The number and staining degree of NADPH-d positive neurons began to increase at 6 h after the formalin injection in CA1, CA2 - 3 and DG of hippocampus as well as NO content, which increased most obviously at 12 h and returned to control level at 48 h.
CONCLUSIONFormalin-induced inflammatory pain could induce the elevation of NOS activity in CA1, CA2 - 3 and DG of hippocampus with a certain time course, which further led to a increase of NO production in hippocampus.
Animals ; Formaldehyde ; adverse effects ; Hippocampus ; metabolism ; Inflammation ; chemically induced ; metabolism ; Male ; Nitric Oxide ; biosynthesis ; Nitric Oxide Synthase ; metabolism ; Pain ; chemically induced ; metabolism ; Pain Threshold ; Rats ; Rats, Sprague-Dawley