1.Cloning of IPO8 promoter and analysis of its transcription activity.
Jianjun XIONG ; Zhen GONG ; Xiao'ou ZHOU ; Ting WANG ; Jianyun LIU ; Weidong LI
Journal of Central South University(Medical Sciences) 2014;39(8):764-768
OBJECTIVE:
To clone 5' untranslated region of human IPO8 gene and determine its transcription activity.
METHODS:
We used 5' rapid amplification of cDNA ends (RACE) analysis to identify the IPO8 transcription start site (TSS), and amplified series truncated 5' UTR fragment containing transcription start site. The PCR productions were inserted into luciferase report vector pGL3- Basic. After confirmation by restriction enzyme digestion, the recombinant plasmids were cotransfected into Saos-2 cells with plasmid pRL-TK. The luciferase activities were measured by dual luciferase reporter system.
RESULTS:
The IPO8 gene transcription start site was established. The electrophoresis analysis of restriction enzyme digestion and DNA sequencing verified the fragments were successfully amplified and inserted into pGL3-Basic. After the recombinant plasmids transfected, the highexpressions of luciferase were detected in Saos-2 cells.
CONCLUSION
The recombinant vector containing IPO8 promoter is constructed successfully, which provides a foundation for determining expressional regulation of IPO8 in the further study.
Cloning, Molecular
;
DNA, Complementary
;
Genetic Vectors
;
Humans
;
Luciferases
;
Plasmids
;
Promoter Regions, Genetic
;
Transfection
;
beta Karyopherins
;
genetics
2.Spatial-temporal graph convolutional neural network for schizophrenia recognition
Xinyi XU ; Bin LI ; Geng ZHU ; Yuxing ZHOU ; Ping LIN ; Xiao'ou LI
Chinese Journal of Medical Physics 2024;41(2):227-232
A spatial-temporal convolutional neural network-based method is proposed for schizophrenia classification.Unlike the mainstream methods that only analyze the temporal frequency features in EEG and ignore the spatial features between brain regions,the model mainly obtains the spatial-frequency features by convolving the adjacency matrix composed of wavelet coherence coefficients between different channels and EEG sequences,and then extracts the temporal-frequency features through one-dimensional temporal convolution.The processed matrix is flattened after multiple convolutions and input to the classification model.Experimental results show that the method has a classification accuracy of 96.32%on the publicly available dataset Zenodo,demonstrating its effectiveness and exhibiting the advantages of fusing temporal-frequency and spatial-frequency features for schizophrenia diagnosis.