1.Prevalence of anti-HCV in hemodialysis patients.
Jae Hwa UM ; Tae Jin KIM ; Jae Sung CHUNG ; Sung Me LEE ; Jin Min KONG ; Jong Han OK ; Dae Sik WON
Korean Journal of Nephrology 1991;10(4):563-566
No abstract available.
Humans
;
Prevalence*
;
Renal Dialysis*
2.Clinical Availability of Maximal Step Length.
Seung Joo LEE ; Jae Won SHIN ; In Sik KONG ; Sang Hoo YOO ; Jung Un LEE ; BeLong CHO
Journal of the Korean Academy of Family Medicine 2007;28(4):263-270
BACKGROUND: Many clinical measures have been used to assess fall risk in elderly adults. The purpose of this study was to assess the interrelationship of maximal step length (MSL) measurement as protective strategies and risk factors of falls. METHODS: The study population consisted of 149 community-dwelling people (> or = 60 yrs). Demographic data, depression degree (GDS-short form), fatigue degree (revised Chalder's fatigue scale) were reviewed by self-recorded questionnaire. K-MMSE, MSL, US and TUG were done when they visited our clinic. We examined whether MSL was correlated with the six leg-directions and was related to other measures to evaluate fall risk. To examine the association between MSL and other variables, we analyzed data by T-test, ANOVA and multiple regressions. RESULTS: The MSLmean correlated highly with each leg- direction MSL (correlation coefficient, r=0.771~0.941, P<0.01), US (r=0.392, P<0.01) and TUG (r=-0.608, P<0.01). The MSL(mean/L) (MSL(mean), leg length adjusted) correlated strongly with frequent fall (P=0.005). Also, the MSL(mean/L) had a tendency to be low in the elderly, females, in those with regular exercise, widowed or divorced, DM, stroke, dementia suspicion, inclination toward depression, arthritis and frequent falls, but higher score on fatigue groups. Age (P<.001), sex (P=0.001), DM (P<.001), frequent falls (P= 0.017), dementia suspicion (P=0.016), and arthritis (P= 0.024) variables were related with MSL(mean/L) when we examined these variables by multiple regression analysis. CONCLUSION: MSL was correlated highly with other functional performance test and DM, age, sex, frequent fall, dementia suspicion, and arthritis variables for fall risk.
Adult
;
Aged
;
Arthritis
;
Dementia
;
Depression
;
Divorce
;
Fatigue
;
Female
;
Humans
;
Leg
;
Risk Factors
;
Stroke
;
Widowhood
;
Surveys and Questionnaires
3.Clinical Availability of Maximal Step Length.
Seung Joo LEE ; Jae Won SHIN ; In Sik KONG ; Sang Hoo YOO ; Jung Un LEE ; BeLong CHO
Journal of the Korean Academy of Family Medicine 2007;28(4):263-270
BACKGROUND: Many clinical measures have been used to assess fall risk in elderly adults. The purpose of this study was to assess the interrelationship of maximal step length (MSL) measurement as protective strategies and risk factors of falls. METHODS: The study population consisted of 149 community-dwelling people (> or = 60 yrs). Demographic data, depression degree (GDS-short form), fatigue degree (revised Chalder's fatigue scale) were reviewed by self-recorded questionnaire. K-MMSE, MSL, US and TUG were done when they visited our clinic. We examined whether MSL was correlated with the six leg-directions and was related to other measures to evaluate fall risk. To examine the association between MSL and other variables, we analyzed data by T-test, ANOVA and multiple regressions. RESULTS: The MSLmean correlated highly with each leg- direction MSL (correlation coefficient, r=0.771~0.941, P<0.01), US (r=0.392, P<0.01) and TUG (r=-0.608, P<0.01). The MSL(mean/L) (MSL(mean), leg length adjusted) correlated strongly with frequent fall (P=0.005). Also, the MSL(mean/L) had a tendency to be low in the elderly, females, in those with regular exercise, widowed or divorced, DM, stroke, dementia suspicion, inclination toward depression, arthritis and frequent falls, but higher score on fatigue groups. Age (P<.001), sex (P=0.001), DM (P<.001), frequent falls (P= 0.017), dementia suspicion (P=0.016), and arthritis (P= 0.024) variables were related with MSL(mean/L) when we examined these variables by multiple regression analysis. CONCLUSION: MSL was correlated highly with other functional performance test and DM, age, sex, frequent fall, dementia suspicion, and arthritis variables for fall risk.
Adult
;
Aged
;
Arthritis
;
Dementia
;
Depression
;
Divorce
;
Fatigue
;
Female
;
Humans
;
Leg
;
Risk Factors
;
Stroke
;
Widowhood
;
Surveys and Questionnaires
4.Taxonomic Position and Species Identity of the Cultivated Yeongji 'Ganoderma lucidum' in Korea.
O Chul KWON ; Young Jin PARK ; Hong Il KIM ; Won Sik KONG ; Jae Han CHO ; Chang Soo LEE
Mycobiology 2016;44(1):1-6
Ganoderma lucidum has a long history of use as a traditional medicine in Asian countries. However, the taxonomy of Ganoderma species remains controversial, since they were initially classified on the basis of their morphological characteristics. Recently, it was proposed that G. lucidum from China be renamed as G. sichuanense or G. lingzhi. In the present study, phylogenetic analysis using the internal transcribed spacer region rDNA sequences of the Ganoderma species indicated that all strains of the Korean 'G. lucidum' clustered into one group together with G. sichuanense and G. lingzhi from China. However, strains from Europe and North American, which were regarded as true G. lucidum, were positioned in a clearly different group. In addition, the average size of the basidiospores from the Korean cultivated Yeongji strains was similar to that of G. lingzhi. Based on these results, we propose that the Korean cultivated Yeongji strains of 'G. lucidum' should be renamed as G. lingzhi.
Asian Continental Ancestry Group
;
China
;
Classification
;
DNA, Ribosomal
;
Europe
;
Ganoderma
;
Humans
;
Korea*
;
Medicine, Traditional
;
Phylogeny
;
Reishi
5.Cloning and Expression Analysis of Phenylalanine Ammonia-Lyase Gene in the Mycelium and Fruit Body of the Edible Mushroom Flammulina velutipes.
Yeo Hong YUN ; Ja Sun KOO ; Seong Hwan KIM ; Won Sik KONG
Mycobiology 2015;43(3):327-332
Phenylalanine ammonia-lyase (PAL) gene is known to be expressed in plants, and is involved in the differentiation, growth and synthesis of secondary metabolites. However, its expression in fungi remains to be explored. To understand its expression in mushroom fungi, the PAL gene of the edible mushroom Flammulina velutipes (Fvpal) was cloned and characterized. The cloned Fvpal consists of 2,175 bp, coding for a polypeptide containing 724 amino acids and having 11 introns. The translated amino acid sequence of Fvpal shares a high identity (66%) with that of ectomycorrhizal fungus Tricholoma matsutake. Distinctively, the Fvpal expression in the mycelium was higher in minimal medium supplemented with L-tyrosine than with other aromatic amino acids. During cultivation of the mushroom on sawdust medium, Fvpal expression in the fruit body correspondingly increased as the mushroom grew. In the fruiting body, Fvpal was expressed more in the stipe than in the pileus. These results suggest that F. velutipes PAL activity differs in the different organs of the mushroom. Overall, this is first report to show that the PAL gene expression is associated with mushroom growth in fungi.
Agaricales*
;
Amino Acid Sequence
;
Amino Acids
;
Amino Acids, Aromatic
;
Clinical Coding
;
Clone Cells*
;
Cloning, Organism*
;
Flammulina*
;
Fruit*
;
Fungi
;
Gene Expression
;
Introns
;
Mycelium*
;
Phenylalanine Ammonia-Lyase*
;
Phenylalanine*
;
Tricholoma
;
Tyrosine
6.Genome-Wide Comparison of Carbohydrate-Active Enzymes (CAZymes) Repertoire of Flammulina ononidis.
Mycobiology 2018;46(4):349-360
Whole-genome sequencing of Flammulina ononidis, a wood-rotting basidiomycete, was performed to identify genes associated with carbohydrate-active enzymes (CAZymes). A total of 12,586 gene structures with an average length of 2009 bp were predicted by the AUGUSTUS tool from a total 35,524,258 bp length of de novo genome assembly (49.76% GC). Orthologous analysis with other fungal species revealed that 7051 groups contained at least one F. ononidis gene. In addition, 11,252 (89.5%) of 12,586 genes for F. ononidis proteins had orthologs among the Dikarya, and F. ononidis contained 8 species-specific genes, of which 5 genes were paralogous. CAZyme prediction revealed 524 CAZyme genes, including 228 for glycoside hydrolases, 21 for polysaccharide lyases, 87 for glycosyltransferases, 61 for carbohydrate esterases, 87 with auxiliary activities, and 40 for carbohydrate-binding modules in the F. ononidis genome. This genome information including CAZyme repertoire will be useful to understand lignocellulolytic machinery of this white rot fungus F. ononidis.
Basidiomycota
;
Esterases
;
Flammulina*
;
Fungi
;
Genome
;
Glycoside Hydrolases
;
Glycosyltransferases
;
Polysaccharide-Lyases
7.Genome-Wide Identification and Characterization of Novel Laccase Genes in the White-Rot Fungus Flammulina velutipes.
Hong Il KIM ; O Chul KWON ; Won Sik KONG ; Chang Soo LEE ; Young Jin PARK
Mycobiology 2014;42(4):322-330
The aim of this study was to identify and characterize new Flammulina velutipes laccases from its whole-genome sequence. Of the 15 putative laccase genes detected in the F. velutipes genome, four new laccase genes (fvLac-1, fvLac-2, fvLac3, and fvLac-4) were found to contain four complete copper-binding regions (ten histidine residues and one cysteine residue) and four cysteine residues involved in forming disulfide bridges, fvLac-1, fvLac-2, fvLac3, and fvLac-4, encoding proteins consisting of 516, 518, 515, and 533 amino acid residues, respectively. Potential N-glycosylation sites (Asn-Xaa-Ser/Thr) were identified in the cDNA sequence of fvLac-1 (Asn-454), fvLac-2 (Asn-437 and Asn-455), fvLac-3 (Asn-111 and Asn-237), and fvLac4 (Asn-402 and Asn-457). In addition, the first 19~20 amino acid residues of these proteins were predicted to comprise signal peptides. Laccase activity assays and reverse transcription polymerase chain reaction analyses clearly reveal that CuSO4 affects the induction and the transcription level of these laccase genes.
Copper Sulfate
;
Cysteine
;
DNA, Complementary
;
Flammulina*
;
Fungi*
;
Genome
;
Histidine
;
Laccase*
;
Polymerase Chain Reaction
;
Protein Sorting Signals
;
Reverse Transcription
8.Highly Efficient Electroporation-mediated Transformation into Edible Mushroom Flammulina velutipes.
Jong Kun KIM ; Young Jin PARK ; Won Sik KONG ; Hee Wan KANG
Mycobiology 2010;38(4):331-335
In this study, we developed an efficient electroporation-mediated transformation system featuring Flammulina velutipes. The flammutoxin (ftx) gene of F. velutipes was isolated by reverse transcription-PCR. pFTXHg plasmid was constructed using the partial ftx gene (410 bp) along with the hygromycin B phosphotransferase gene (hygB) downstream of the glyceraldehydes-3-phosphate dehydrogenase (gpd) promoter. The plasmid was transformed into protoplasts of monokaryotic strain 4019-20 of F. velutipes by electroporation. High transformation efficiency was obtained with an electric-pulse of 1.25 kV/cm by using 177 transformants/microg of DNA in 1 x 107 protoplasts. PCR and Southern blot hybridization indicated that a single copy of the plasmid DNA was inserted at different locations in the F. velutipes genome by non-homologous recombination. Therefore, this transformation system could be used as a useful tool for gene function analysis of F. velutipes.
Agaricales
;
Blotting, Southern
;
Chimera
;
Cinnamates
;
Coat Protein Complex I
;
DNA
;
Electroporation
;
Flammulina
;
Fungal Proteins
;
Genome
;
Hygromycin B
;
Mycotoxins
;
Oxidoreductases
;
Plasmids
;
Polymerase Chain Reaction
;
Protoplasts
;
Recombination, Genetic
;
Sprains and Strains
9.The Efficient Transformation of Pleurotus ostreatus using REMI Method.
Joong Ho JOH ; Beom Gi KIM ; Kyo Sun CHU ; Won Sik KONG ; Young Bok YOO ; Chang Soo LEE
Mycobiology 2003;31(1):32-35
Restriction enzyme-mediated integration (REMI) was used to transform uracil auxotrophs of Pleurotus ostreatus to prototrophy. When protoplasts of Pleurotus ostreatus were treated by the reaction mixture containing 10 units of BamHI, the frequency of REMI was about 64 transformants per 1 microg of DNA. This efficiency was increased by 14.2 times compared with that of the conventional PEG transformation. The optimal condition for REMI of P. ostreatus was achieved when 1 microg of linearized pTRura3-2 DNA was added into 1x10(7) protoplasts along with 10 units BamHI. Southern blot analysis revealed that about 50% of transformants examined were caused by REMI event and 30% carried single copy insertion at the genome. This suggested that the REMI method might be a useful tool for efficient transformation and tagging mutagenesis of P. ostreatus.
Blotting, Southern
;
DNA
;
Genome
;
Mutagenesis
;
Pleurotus*
;
Protoplasts
;
Uracil
10.Regional Variation in Accessing Regional Hospitals for Cancer Patients.
Yeon Ok MOON ; Eun Cheol PARK ; Hai Rim SHIN ; Young Joo WON ; Kyu Won JUNG ; Jin Hee LEE ; Soon Young HWANG ; Hyun Joo KONG ; Seung Sik HWANG ; Jong Koo LEE ; In Sik KONG ; Myung Il HAHM
Korean Journal of Epidemiology 2006;28(2):152-161
OBJECTIVES: To investigate the differences in accessing regional hospitals and the utilization rate of hospitals located in other regions for cancer patients by regions. METHODS: Data for the utilization of regional hospitals for cancer patients were obtained from the Korean National Cancer Incidence Databases in 1999 and 2002. We divided the regions into 16 provinces by administrative districts. We using the SAS 9.1.3 to analyze difference of regional self-sufficiency and the Arcview 3.2 to show in a schematize for regional variation of the regional self-sufficiency. RESULTS: There were regional variations in the regional self-sufficiency of cancer patients. Especially, Jeollanam-do(1999 13.6%, 2002 12.8%), Gyeongsangbuk-do(1999 22.0%, 2002 20.7%), and Chungcheongnam-do(1999 27.8%, 2002 27.1%) had low regional self-sufficiency. The regional self-sufficiency in Gyeonggi-do and utilization rate of cancer patients who lived in other regions were increased between 1999 and 2002(regional self-sufficiency: 1999 37.2%, 2002 48.2%). CONCLUSION: The results of this study showed that there were regional variation in utilization of regional hospitals for cancer patients. Accessibility of cancer patients in metropolitan areas was higher than in small size cities, medium size cities, and rural county areas. These results suggested that it should be considered support medical facilities for cancer patients in rural areas where have lower relevance rate.
Gyeonggi-do
;
Humans
;
Incidence