1.Improved Software to Browse the Serial Medical Images for Learning.
Koojoo KWON ; Min Suk CHUNG ; Jin Seo PARK ; Byeong Seok SHIN ; Beom Sun CHUNG
Journal of Korean Medical Science 2017;32(7):1195-1201
The thousands of serial images used for medical pedagogy cannot be included in a printed book; they also cannot be efficiently handled by ordinary image viewer software. The purpose of this study was to provide browsing software to grasp serial medical images efficiently. The primary function of the newly programmed software was to select images using 3 types of interfaces: buttons or a horizontal scroll bar, a vertical scroll bar, and a checkbox. The secondary function was to show the names of the structures that had been outlined on the images. To confirm the functions of the software, 3 different types of image data of cadavers (sectioned and outlined images, volume models of the stomach, and photos of the dissected knees) were inputted. The browsing software was downloadable for free from the homepage (anatomy.co.kr) and available off-line. The data sets provided could be replaced by any developers for their educational achievements. We anticipate that the software will contribute to medical education by allowing users to browse a variety of images.
Body Image
;
Cadaver
;
Dataset
;
Education, Medical
;
Educational Status
;
Hand Strength
;
Learning*
;
Stomach
;
Teaching
;
Visible Human Projects
2.Development of the first head finite element model based on Chinese visible human data.
Hui ZHAO ; Rong CHEN ; Zhiyong YIN ; Shaoxiang ZHANG ; Zhengguo WANG
Journal of Biomedical Engineering 2010;27(4):882-886
The second Chinese visible human (CVH) data has been used to build a more precise finite element model of Chinese head via 3-D image reconstruction, solid model reconstruction, finite element meshing, and assembling of finite element model. This second case of finite element model of Chinese head contains skull, facial bones, inferior maxilla, cerebral falx, brain, cerebellum brainstem, and so on. All the mesh elements, according to their main quality check results in line with the engineering requirements, were identified as solid elements, and the numbers of nodes and elements were determined to be 31 223 and 19 911 respectively. The model is coincident with the anatomy of human head; and its accuracy in some region, especially in fundus cranii and fundus cranii, is more excellent than that of the other models based on CT/MRL The development of the first head finite element model based on CVH data has brought on a remarkable progress in the application of CVH platform.
China
;
Finite Element Analysis
;
Head
;
anatomy & histology
;
Humans
;
Imaging, Three-Dimensional
;
Visible Human Projects
3.Landmark-based automatic registration of serial cross-sectional images of Chinese digital human using Photoshop and Matlab software.
Xiu-yun SU ; Guo-xian PEI ; Bin YU ; Yan-ling HU ; Jin LI ; Qian HUANG ; Xu LI ; Yuan-zhi ZHANG
Journal of Southern Medical University 2007;27(12):1884-1887
This paper describes automatic registration of the serial cross-sectional images of Chinese digital human by projective registration method based on the landmarks using the commercially available software Photoshop and Matlab. During cadaver embedment for acquisition of the Chinese digital human images, 4 rods were placed parallel to the vertical axis of the frozen cadaver to allow orientation. Projective distortion of the rod positions on the cross-sectional images was inevitable due to even slight changes of the relative position of the camera. The original cross-sectional images were first processed using Photoshop software firstly to obtain the images of the orientation rods, and the centroid coordinate of every rod image was acquired with Matlab software. With the average coordinate value of the rods as the fiducial point, two-dimensional projective transformation coefficient of each image was determined. Projective transformation was then carried out and projective distortion from each original serial image was eliminated. The rectified cross-sectional images were again processed using Photoshop to obtain the image of the first orientation rod, the coordinate value of first rod image was calculated using Matlab software, and the cross-sectional images were cut into images of the same size according to the first rod spatial coordinate, to achieve automatic registration of the serial cross-sectional images. sing Photoshop and Matlab softwares, projective transformation can accurately accomplish the image registration for the serial images with simpler calculation processes and easier computer processing.
Algorithms
;
China
;
Humans
;
Imaging, Three-Dimensional
;
methods
;
Software
;
Visible Human Projects
4.3-dimensional visualization study of angle nerve of facial nerve.
Ning-Ze YANG ; Xiao-Wei SU ; Zhi-Jun WANG ; Bin WANG ; Ning LV
Chinese Journal of Plastic Surgery 2012;28(5):366-368
OBJECTIVETo validate the previous anatomic study result about angle nerve of facial nerve through 3-dimensional (3-D) visualization technique, so as to provide theory basis for clinic treatment of nerve loss.
METHODThe full-thickness soft tissue at internal side of inner canthus was harvested from adult cadaveric head. The skin was 3 cm in length and 1 cm in width, with 2 parallel cut lines as location markers. The specimen was sliced continuously into 120 slices, with 10 microm in thickness for every slice, 0.25 mm apart. The slices underwent HE staining and 2-D digital image was gained by high resolution scanner. Then 3-D reconstruction was performed.
RESULTS(1) It showed the 3-D structures and routes of angle nerve, as well as the relationship between angle nerve and angle arteriovenous. All the reconstructed structures can be displayed together or separately, also from any angles. (2) It confirmed the accuracy of microscopic anatomy study about angle nerve. (3) The 3-D reconstruction of angle nerve, as well as the surrounding structure could be very useful for clinical application.
CONCLUSIONBased on the histologic study and computer technology, the 3-D reconstruction of angle nerve could provide accurate basis for the feasibility of clinic treatment of angle nerve loss.
Adult ; Facial Nerve ; anatomy & histology ; Humans ; Image Processing, Computer-Assisted ; Imaging, Three-Dimensional ; Visible Human Projects
5.Heart segmentation based on mathematical morphology And Otsu in visible human project images.
Ping SHI ; Yi WANG ; Haitao ZHAO ; Mengqi WEI ; Hongyang HAO
Journal of Biomedical Engineering 2007;24(5):996-1000
A multi-step method for extracting the heart image from visible human project (VHP) data was proposed in this paper. In the first step, Otsu's thresholding segmentation based on mathematical morphological techniques called opening-by-reconstruction and closing-by-reconstruction was used to preprocess the original image in order to effectively overcome the disadvantages of using only thresholding segmentation. The second step was to extract heart data from the proposed image. This multi-step method improved the computation efficiency and attained higher precision, suggesting its significant value for application in VHP.
Algorithms
;
China
;
Heart
;
anatomy & histology
;
Humans
;
Image Enhancement
;
Image Processing, Computer-Assisted
;
Mathematics
;
Visible Human Projects
6.Homepage to distribute the anatomy learning contents including Visible Korean products, comics, and books.
Beom Sun CHUNG ; Min Suk CHUNG
Anatomy & Cell Biology 2018;51(1):7-13
The authors have operated the homepage (http://anatomy.co.kr) to provide the learning contents of anatomy. From the homepage, sectioned images, volume models, and surface models—all Visible Korean products—can be downloaded. The realistic images can be interactively manipulated, which will give rise to the interest in anatomy. The various anatomy comics (learning comics, comic strips, plastination comics, etc.) are approachable. Visitors can obtain the regional anatomy book with concise contents, mnemonics, and schematics as well as the simplified dissection manual and the pleasant anatomy essay. Medical students, health allied professional students, and even laypeople are expected to utilize the easy and comforting anatomy contents. It is hoped that other anatomists successively produce and distribute their own informative contents.
Anatomists
;
Anatomy, Regional
;
Hope
;
Humans
;
Internet
;
Learning*
;
Students, Medical
;
Visible Human Projects
7.Three Software Tools for Viewing Sectional Planes, Volume Models, and Surface Models of a Cadaver Hand
Beom Sun CHUNG ; Min Suk CHUNG ; Byeong Seok SHIN ; Koojoo KWON
Journal of Korean Medical Science 2018;33(8):e64-
BACKGROUND: The hand anatomy, including the complicated hand muscles, can be grasped by using computer-assisted learning tools with high quality two-dimensional images and three-dimensional models. The purpose of this study was to present up-to-date software tools that promote learning of stereoscopic morphology of the hand. METHODS: On the basis of horizontal sectioned images and outlined images of a male cadaver, vertical planes, volume models, and surface models were elaborated. Software to browse pairs of the sectioned and outlined images in orthogonal planes and software to peel and rotate the volume models, as well as a portable document format (PDF) file to select and rotate the surface models, were produced. RESULTS: All of the software tools were downloadable free of charge and usable off-line. The three types of tools for viewing multiple aspects of the hand could be adequately employed according to individual needs. CONCLUSION: These new tools involving the realistic images of a cadaver and the diverse functions are expected to improve comprehensive knowledge of the hand shape.
Anatomy, Regional
;
Cadaver
;
Computer-Assisted Instruction
;
Hand Strength
;
Hand
;
Humans
;
Learning
;
Male
;
Muscles
;
Visible Human Projects
8.Surface models of the male urogenital organs built from the Visible Korean using popular software.
Dong Sun SHIN ; Jin Seo PARK ; Byeong Seok SHIN ; Min Suk CHUNG
Anatomy & Cell Biology 2011;44(2):151-159
Unlike volume models, surface models, which are empty three-dimensional images, have a small file size, so they can be displayed, rotated, and modified in real time. Thus, surface models of male urogenital organs can be effectively applied to an interactive computer simulation and contribute to the clinical practice of urologists. To create high-quality surface models, the urogenital organs and other neighboring structures were outlined in 464 sectioned images of the Visible Korean male using Adobe Photoshop; the outlines were interpolated on Discreet Combustion; then an almost automatic volume reconstruction followed by surface reconstruction was performed on 3D-DOCTOR. The surface models were refined and assembled in their proper positions on Maya, and a surface model was coated with actual surface texture acquired from the volume model of the structure on specially programmed software. In total, 95 surface models were prepared, particularly complete models of the urinary and genital tracts. These surface models will be distributed to encourage other investigators to develop various kinds of medical training simulations. Increasingly automated surface reconstruction technology using commercial software will enable other researchers to produce their own surface models more effectively.
Computer Simulation
;
Humans
;
Image Processing, Computer-Assisted
;
Imaging, Three-Dimensional
;
Male
;
Research Personnel
;
Urogenital System
;
Visible Human Projects
9.Observation of the sectional anatomic structure and visualization of the normal lumbar plexus of virtual Chinese human.
Yuan-Zhi ZHANG ; Sheng LU ; Guo-Xian PEI
Chinese Journal of Surgery 2007;45(4):243-245
OBJECTIVETo observe the normal structure of lumbar plexus in the virtual Chinese Human (VCH) Female I and Male III and establish a digitized visible model of their lumbar plexus.
METHODSThe cross-sectional images from the VCH Female I and Male III dataset were reviewed to study lumbar plexus structures on a section-by-section basis. The nerve roots, major psoas muscle and blood vessels were also observed. Three-dimensional computerized reconstructions of lumbar plexus and its adjacent structures were conducted from these data using Amira 3.1 (TGS) imaging software respectively.
RESULTSThe three-dimensional reconstructed visible models perfectly displayed the anatomic relationships of lumbar plexus structures and their adjacent structures.
CONCLUSIONSVCH Female I and Male III dataset can provide complete and accurate data of main structure of lumbar plexus. The digitized models of lumbar plexus offer unique insights into the complex anatomy, and morphologic data for imaging diagnosis and treatment of the injury of lumbar plexus.
Anatomy, Cross-Sectional ; Female ; Humans ; Imaging, Three-Dimensional ; Lumbosacral Plexus ; anatomy & histology ; Male ; Models, Anatomic ; Visible Human Projects
10.Construction of a three-dimensional mandible model containing teeth based on the Virtual Chinese Human data.
Yu ZHANG ; Lei TANG ; Ming CHEN
Journal of Southern Medical University 2008;28(8):1449-1451
OBJECTIVETo construct a three-dimensional (3D) model of the mandible containing the teeth based on the Virtual Chinese Human Data.
METHODSFrom the previously established Virtual Chinese Human Dataset, 280 consecutive images containing the mandibular region were taken as a source data for reconstruction of the 3D mandible model. The Photoshop software was adopted for 2D image processing, and a special medical reconstruction software was used for the 3D reconstruction of the mandible model, followed by software-based smoothing and rendering of the model.
RESULTS AND CONCLUSIONA 3D model of the mandible was successfully reconstructed, which allows a clear 3D observation of the anatomy of the mandible.
Adult ; Cadaver ; China ; Dental Models ; Humans ; Imaging, Three-Dimensional ; methods ; Male ; Mandible ; anatomy & histology ; Software ; Visible Human Projects