1.Identification and molecular study on vibrio cholerae in sea products.
Zhao-rui CHANG ; Jing ZHANG ; Duo-chun WANG ; Hao-jie ZHONG ; Jin XU ; Lu RAN ; Mao-wu WANG ; Zi-jun WANG ; Biao KAN
Chinese Journal of Preventive Medicine 2007;41(4):304-306
OBJECTIVETo investigate the serologic type, phage-biotype and toxic factor of Vibrio cholerae isolated from different sea products, analyze the relation between the Vibrio cholerae in sea products and cholera epidemiology, and provide references for forecasting cholera epidemic situation and drawing out a preventing plan.
METHODThe biotype of strains isolated was analyzed by using type and phage-biotype serological methods. The toxic gene was detected by PCR.
RESULTSThe constituent ratio of V. cholerae O139, Ogawa and Inaba were, respectively, 48.44%, 20.31% and 31.25% in 64 strains of V. cholerae. The result of phage-biotype showed that the 26 strains of V. cholerae O1 were all non-epidemic strains. The result of toxic gene detecting showed that positive rate of V. cholerae O139 was higher than those of Ogawa and Inaba.
CONCLUSIONThe positive rate of toxic gene in V. cholerae O139 was high and the V. cholerae O139 was mainly in turtle, breed aquatics water and crustacean, so these sea products were the important sectors in cholera prevention and control.
Animals ; Bacteriophage Typing ; DNA, Bacterial ; genetics ; Seafood ; microbiology ; Serotyping ; Vibrio cholerae ; classification ; genetics ; isolation & purification ; Vibrio cholerae O1 ; isolation & purification ; Vibrio cholerae O139 ; isolation & purification
2.Distribution and molecular characteristics of Vibrio cholerae serogroups O1 and O139 isolates in estuary of Pearl River.
Duo-Chun WANG ; Xiao-Mei WANG ; Hao-Jie ZHONG ; Jing ZHANG ; Hai-Ling TAN ; Jing-Diao CHEN ; Bai-Sheng LI ; Hui-Zhen ZHENG ; Zhi-Gang CUI ; Chang-Wen KE ; Xiao-Ling DENG ; Yong-Jun GAO ; Zi-Jun WANG ; Biao KAN
Chinese Journal of Epidemiology 2008;29(2):145-150
OBJECTIVEThrough systematic monitoring of the number and strain types of O1 and O139 Vibrio cholerae in the Pearl River estuary waters to analyze it's relevance with the temperature of environment, and the relevance between strains in water and isolates during outbreaks and epidemics as well as to estimate the methods used for environmental water detection and the potential role in cholera surveillance program.
METHODSTwenty-four stations along the Pearl River were selected and the water samples were collected monthly from March 2006 to February 2007. V. cholerae O1 and O139 strains were isolated from the samples. Real-time PCR established in our laboratory was used to detect V. cholerae O1 and O139. Air temperature and water temperature were collected during sampling. Pulsed field gel electrophoresis (PFGE) was applied in molecular typing of the isolates.
RESULTS862 water samples were collected during the study period. A total number of 77 O1 and O139 V. cholerae were isolated in 67 water samples and the positive rates were 7.77% for isolation and 26.33% for real-time PCR. Seasonal trend of positive rates by month were approximately coincident with the change of water temperature. The positive rates in the stations in urban area were higher than those in other areas. Toxigenic O139 strains were found in one station located in downstream of a marine market. Most of the O1 and O139 isolates were non-toxigenic. No trend of seasonal variation of the strains was noticed. Within these 75 isolates, 49 PFGE patterns were identified and the patterns differed widely with the similarity of 57.4% - 100%.
CONCLUSIONV. cholerae existed as the natural habitat in estuary water of the Pearl River and showed obvious genetic diversity. Data from monitoring waters might show the separation of strains with certain seasonal association. But the crowd did not show the relationship between the infections. Results from water surveillance program might provide indicators on the appearance of cholera pathogen which might be used in assessing the environmental risk of cholera epidemics as well as the alert of cholera.
Electrophoresis, Gel, Pulsed-Field ; Environmental Monitoring ; Phylogeny ; Polymerase Chain Reaction ; Seasons ; Temperature ; Vibrio cholerae O1 ; classification ; genetics ; isolation & purification ; Vibrio cholerae O139 ; classification ; genetics ; isolation & purification
3.A duplex nested PCR assay detecting of Vibrio cholerae and its application on environmental specimens.
Ai-ping CHEN ; Xin-ping DONG ; Hai-bin XU ; Jin-song YANG ; Yan-sheng YAN ; Wei-zhi GUO ; Duo-chun WANG ; Biao KAN
Chinese Journal of Preventive Medicine 2009;43(8):674-679
OBJECTIVETo establish a duplex nested PCR assay system which is capable for detecting O1 and O139 groups of Vibrio cholerae simultaneously, and is applicable to environmental specimens from routine cholera surveillance.
METHODSBased on nucleic acid sequences available in GenBank, six sets of primers were designed by PrimerSelect program of DNAStar, targeting the rfb gene that encodes the O antigens of O1 and O139 V. cholerae, respectively. The specificity of several primer combinations was tested. A duplex nested PCR assay system for simultaneously detecting O1 and O139 V. cholerae was established, subsequently, its sensitivity, specificity, reproducibility and field evaluation were tested. The sensitivity of this assay was evaluated by comparing detection limits of nested PCR and conventional PCR. Its reproducibility was tested by 32 positive samples (11 samples positive for O1, 21 samples positive for O139) from environmental surveillance. In addition, the selected amplicons from positive samples were sequenced and analyzed with relevant sequences.
RESULTSThis newly-established duplex nested PCR assay might distinguish O1 V. cholerae from O139 V. cholerae, based on fragment lengths of amplicons, with reliable reproducibility, and no specific amplification was observed as compared with other vibrio species. The sensitivity of this nested PCR was (15 000) higher than conventional PCR, and there was no interference observed with multiple primers and complicated templates in the same vial. In its field evaluation, 32 positive DNA samples were detected and be further confirmed with double or triple tests, implying reliable reproducibility and consistency of this system. These results indicated that this assay had reliable reproducibility. No amplification was observed in all negative specimens and also suggested the acceptable specificity of this assay. Sequence analysis of the selected amplification products revealed 100% homogeneous with relevant genes from V.cholerae, indicating that these amplicons were originated from V. cholerae.
CONCLUSIONThis duplex nested PCR assay system should be rapid, sensitive and especially applicable to small laboratories, and be suitable for dynamic environmental surveillance.
DNA, Bacterial ; Environmental Monitoring ; methods ; Polymerase Chain Reaction ; methods ; Sequence Analysis, DNA ; Vibrio cholerae O1 ; genetics ; isolation & purification ; Vibrio cholerae O139 ; genetics ; isolation & purification
4.Development and application of real-time polymerase chain reaction to detect Vibrio cholerae O1 and O139 in river water.
Xiao-Mei WANG ; Duo-Chun WANG ; Hai-Ling TAN ; Hao-Jie ZHONG ; Jing-Diao CHEN ; Bai-Sheng LI ; Chang-Wen KE ; Mei-Ying YAN ; Jing ZHANG ; Biao KAN
Chinese Journal of Epidemiology 2007;28(8):768-771
OBJECTIVETo develop a real-time SYBR Green polymerase chain reaction (PCR) for detection of Vibrio cholerae serogroups O1 and O139, and to evaluate its reliability through detection of estuary water samples.
METHODSO antigen rfb genes specific for O1 and O139 were used for the design of PCR primers. The real-time SYBR Green PCR system in detecting O1 and O139 specific rfb genes in one tube was developed, and its sensitivity, specificity and reproducibility were evaluated. The ability of the real-time PCR in detection of estuary water samples was compared with the routine PCR and bacteria isolation.
RESULTSThe amplification of O1 or O139 specific target gene could be detected according to the melt curve temperature of amplicons. No amplification was observed in the templates of other 10 non-cholerae vibrios. When comparing to the real-time PCR to bacteria isolation in detection of 524 estuary water samples, it showed high sensitivity, plus also positive in real-time PCR detection among all the samples in which bacteria of O1 or O139 were isolated.
CONCLUSIONThe real-time SYBR Green PCR could be used as the first step of rapid environment screen of V. cholerae in water samples thus might enhance the efficiency of isolation in screening of large amount of water samples.
Environmental Monitoring ; methods ; Genes, Bacterial ; Polymerase Chain Reaction ; methods ; Reproducibility of Results ; Rivers ; microbiology ; Sensitivity and Specificity ; Vibrio cholerae O1 ; isolation & purification ; Vibrio cholerae O139 ; isolation & purification
5.A case of pyomyositis caused by Vibrio cholerae non-O1 in a patient with liver cirrhosis.
Kyung Ju LEE ; Kyung Hwa PARK ; Hee Chang JANG ; Seong Eun KIM ; Mi Ok JANG ; Sook In JUNG ; Jong Hee SHIN
Korean Journal of Medicine 2010;78(4):518-522
Vibrio cholerae non-O1 mainly causes gastroenteritis and rarely causes extraintestinal infections, such as bacteremia. Skin and soft tissue infections are also possible, but the incidence rate is very low. Although the most common cause of pyomyositis is Staphylococcus aureus, Gram-negative organisms such as Vibrio species may also cause pyomyositis in patients with chronic liver disease. Pyomyositis caused by Vibrio cholerae non-O1 has not been reported in Korea. Here, we report a case of pyomyositis caused by V. cholerae non-O1 bacteremia in a patient with liver cirrhosis following seafood exposure. This case study suggests that V. cholerae, as well as V. vulnificus, should be considered when soft tissue infections occur in patients with liver cirrhosis after seafood exposure. In addition, physicians should consider imaging studies for a prompt diagnosis if the patient complains of severe pain disproportionate to the skin manifestation.
Bacteremia
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Cholera
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Gastroenteritis
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Humans
;
Incidence
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Korea
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Liver
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Liver Cirrhosis
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Liver Diseases
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Pyomyositis
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Seafood
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Skin
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Skin Manifestations
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Soft Tissue Infections
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Staphylococcus aureus
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Vibrio
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Vibrio cholerae
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Vibrio cholerae non-O1
6.Pyomyositis Caused by Non-O1 Vibrio Cholerae in a Patient with Liver Cirrhosis.
Sung Keun PARK ; Ji Won LEE ; Jin Yong KIM ; Yoon Soo PARK ; Yiel Hae SEO ; Yong Kyun CHO
Korean Journal of Medicine 2011;80(3):356-359
A 63-year-old man with underlying liver cirrhosis was admitted with painful swelling of the right thigh. We identified a non-O1 Vibrio cholerae strain in blood cultures and multiple pyomyositis in the lower limbs. Non-O1 V. cholerae strains have caused several well-studied food-borne outbreaks of gastroenteritis and have been responsible for sporadic cases of otitis media, skin and soft tissue infection, and bacteremia. Skin and soft tissue infection due to non-O1 V. cholerae is rare and is commonly associated with the presence of chronic underlying disease, such as liver cirrhosis, diabetes mellitus, an immunocompromised state, or a hematological malignancy. We report the first case of pyomyositis caused by non-O1 V. cholerae in Korea. Physicians should consider non-O1 V. cholerae strains as a pathogen that can cause pyomyositis.
Bacteremia
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Cholera
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Diabetes Mellitus
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Disease Outbreaks
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Gastroenteritis
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Hematologic Neoplasms
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Humans
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Korea
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Liver
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Liver Cirrhosis
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Lower Extremity
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Middle Aged
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Otitis Media
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Pyomyositis
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Skin
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Soft Tissue Infections
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Sprains and Strains
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Thigh
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Vibrio
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Vibrio cholerae
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Vibrio cholerae non-O1
7.The study of ctxB and rstR variations of toxigenic Vibrio cholerae O1 El Tor strains isolated from 1961 to 2010 in China.
Weili LIANG ; Xuan ZHAO ; Li ZHANG ; Zhigang CUI ; Jie LI ; Biao KAN
Chinese Journal of Preventive Medicine 2014;48(6):461-465
OBJECTIVETo understand the ctxB and rstR variations of toxigenic Vibrio cholerae (V.cholerae) O1 El Tor strains isolated from different provinces in China from 1961 to 2010.
METHODSAll 385 toxigenic V.cholerae O1 El Tor strains were selected, which were isolated in China between year 1961 and 2010. ctxB gene was amplified by PCR method and sequenced for further analysis. rstR was detected with PCR by using the genotype specific primers.
RESULTSctxB sequence analysis revealed that 52.5% (202/385) isolates carried ctxB(ET) and 47.5% (183/385) carried ctxB(class), namely Y(39) to H and I(68) to T substitutions which were specific to the classical biotype CT-B sequence. From 1961 to 1992, strains carrying ctxB(ET) were predominant and the proportion was as high as 98.4% (182/185). After 1993, strains carrying ctxB(class) were sharply increased. Especially during year 1993 to year 2005, 97.2% (174/179) of the isolated strains carried ctxB(class). Since 2006, resurgence of dominant strains carrying ctxB(ET) or co-existing of strains with ctxB(ET) or ctxB(class) was noticed. rstR genotype detection showed that 62.9% (242/385)of the tested strains carried the rstR(ET), while 6.8% (26/385) with rstR(class), and the remainings contained at least two types of rstR in different combination forms, among which rstR(ET)+rstR(class) combination were the most, accounting for 75.7% (75/99) . Similar to the ctxB, the distribution of rstR genotypes showed time specificity. From 1961 to 1992, strains carrying rstR(ET) predominated (87.0%, 161/185). After 1993, the diversity of rstR genotypes was observed accompanying by a sharp increase of strains containing other rstR genotype, such as rstR(class), rstR(env) and different combinations. There were separately 96% (25/26), 84% (63/75) and 18/18 strains containing rstR(class), rstR(ET)+rstR(class) and rstR(ET)+rstR(class)+rstR(env) isolated after 1993.
CONCLUSIONThe distribution of different genotypes of ctxB and rstR showed obvious time-specificity, and there were various combining forms of rstR, reflecting the diversity of the genetic and evolutionary characteristics of Chinese V.cholerae isolates.
China ; Cholera ; Genotype ; Molecular Epidemiology ; Polymerase Chain Reaction ; Vibrio cholerae ; Vibrio cholerae O1
8.Vibrio cholerae non-O1,non-O139 Isolated from Pleural Effusion Following Total Gastrectomy.
Jung Ho SUK ; Nam Yong LEE ; Jang Ho LEE ; Won Sup OH ; Kyoung Ran PECK ; Jae Hoon SONG
Journal of Korean Medical Science 2006;21(5):944-945
We isolated non-O1, non-O139 Vibrio cholerae from pleural effusion in a patient with recurred advanced gastric caner after total gastrectomy. We also recovered the organism from the patient's stool culture. The patient did not experience gastrointestinal symptoms such as diarrhea except heartburn and epigastric discomfort from stomach cancer before admission. The suspected route of infection is directly from the gastrointestinal tract through the previous surgical wounds. After antibiotic treatment, no more V. cholerae was isolated and the patient was well discharged from the hospital. This is the first report of V. cholerae infection associated with pleural effusion in a long-term latent carrier of the organism.
Vibrio cholerae non-O1/*isolation & purification
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Stomach Neoplasms/microbiology/surgery
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Pleural Effusion/*microbiology
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Middle Aged
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Male
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Humans
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*Gastrectomy
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Carrier State
9.Phenotypic diversity of toxigenic Vibrio cholerae O1 El Tor strains identified in China.
Xuan ZHAO ; Li ZHANG ; Jie LI ; Biao KAN ; Weili LIANG
Chinese Journal of Epidemiology 2014;35(5):573-575
OBJECTIVETo understand the phenotypic diversity of toxigenic Vibrio cholerae O1 El Tor strains isolated from different provinces in China during the last 50 years.
METHODSTraditional biotyping testings including susceptibility to polymyxin B, sensitivity to group IV phage, Voges-Proskauer test and haemolysis of sheep erythrocytes were conducted.
RESULTSData from Biotype-specific phenotype analysis revealed that only 133 isolates carried the typical El Tor phenotypes while the other 251 isolates displayed atypical El Tor phenotypes. Combined with ctxB, rstR genotypes and phenotypic characteristics, 64 isolates were identified as typical El Tor biotype, 21 were El Tor variants that showing the typical El Tor biotype-specific phenotype but with ctxB(class). 280 isolates were defined as the hybrid groups with traits of both classical and El Tor biotypes that could be further classified into 45 groups, based on the combination of genotypes of ctxB, rstR and phenotypic characteristics.
CONCLUSIONToxigenic Vibrio cholerae O1 El Tor strains that isolated from different provinces in China displayed high phenotypic diversity. The traditional biotype traits could not be used to correctly distinguish the two different biotypes.
China ; Genotype ; Phenotype ; Polymorphism, Genetic ; Vibrio cholerae O1 ; genetics
10.A Case of Vibrio cholerae Non-O1/O139 Gastroenteritis.
Hae Kyung LEE ; Ok Ran SHIN ; Dong Gun LEE ; Hiun Suk CHAE ; Jin Taeg KIM ; Chang Suk KANG
The Korean Journal of Laboratory Medicine 2004;24(6):386-388
Vibrio cholerae non-O1/O139 strains are the organisms that are biochemically indistinguishable from V. cholerae but do not agglutinate in Vibrio cholerae O1 and O139 antisera. V. cholerae non-O1/O139 strains are associated with gastroenteritis and extraintestinal infections such as bacteremia, peritonitis and wound infections. Gastroenteritis by V. cholerae non-O1/O139 is uncommon in Korea. We isolated V. cholerae non-O1/O139 from a stool specimen of a one year-old female with diarrhea and high fever.
Bacteremia
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Cholera
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Diarrhea
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Female
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Fever
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Gastroenteritis*
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Humans
;
Immune Sera
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Korea
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Peritonitis
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Vibrio cholerae O1
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Vibrio cholerae*
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Wound Infection