1.Na+/H+ antiporter and plant salt tolerance.
Zhong-Hai REN ; Xiu-Ling MA ; Yan-Xiu ZHAO ; Hui ZHANG
Chinese Journal of Biotechnology 2002;18(1):16-19
Na+/H+ antiporter plays an important role in mechanisms of the plant salt tolerance, it extrudes Na+ from cell energized by the proton gradient generated by the plasm membrane H(+)-ATPase and/or compartmentalizes Na+ in vacuole energized by the proton gradient generated by the vacuolar membrane H(+)-ATPase and H(+)-PPiase. This review mainly discusses the latest progress in the study of Na+/H+ antiporter in plant and yeast at molecular level.
Phylogeny
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Plants
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metabolism
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Salts
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metabolism
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Sodium
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metabolism
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Sodium-Hydrogen Exchangers
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classification
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metabolism
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Vacuoles
;
physiology
2.Advances in the production of chemicals by organelle compartmentalization in Saccharomyces cerevisiae.
Tao LUAN ; Mengqi YIN ; Ming WANG ; Xiulong KANG ; Jianzhi ZHAO ; Xiaoming BAO
Chinese Journal of Biotechnology 2023;39(6):2334-2358
As a generally-recognized-as-safe microorganism, Saccharomyces cerevisiae is a widely studied chassis cell for the production of high-value or bulk chemicals in the field of synthetic biology. In recent years, a large number of synthesis pathways of chemicals have been established and optimized in S. cerevisiae by various metabolic engineering strategies, and the production of some chemicals have shown the potential of commercialization. As a eukaryote, S. cerevisiae has a complete inner membrane system and complex organelle compartments, and these compartments generally have higher concentrations of the precursor substrates (such as acetyl-CoA in mitochondria), or have sufficient enzymes, cofactors and energy which are required for the synthesis of some chemicals. These features may provide a more suitable physical and chemical environment for the biosynthesis of the targeted chemicals. However, the structural features of different organelles hinder the synthesis of specific chemicals. In order to ameliorate the efficiency of product biosynthesis, researchers have carried out a number of targeted modifications to the organelles grounded on an in-depth analysis of the characteristics of different organelles and the suitability of the production of target chemicals biosynthesis pathway to the organelles. In this review, the reconstruction and optimization of the biosynthesis pathways for production of chemicals by organelle mitochondria, peroxisome, golgi apparatus, endoplasmic reticulum, lipid droplets and vacuole compartmentalization in S. cerevisiae are reviewed in-depth. Current difficulties, challenges and future perspectives are highlighted.
Saccharomyces cerevisiae/metabolism*
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Saccharomyces cerevisiae Proteins/metabolism*
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Golgi Apparatus/metabolism*
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Metabolic Engineering
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Vacuoles/metabolism*
3.Advances in plant anthocyanin transport mechanism.
Lu WANG ; Silan DAI ; Xuehua JIN ; He HUANG ; Yan HONG
Chinese Journal of Biotechnology 2014;30(6):848-863
Anthocyanin biosynthesis is one of the thoroughly studied enzymatic pathways in biology, but little is known about the molecular mechanisms of its final stage: the transport of the anthocyanins into the vacuole. A clear picture of the dynamic trafficking of flavonoids is only now beginning to emerge. So far four different models have been proposed to explain the transport of anthocyanins from biosynthetic sites to the central vacuole, and four types of transporters have been found associated with the transport of anthocyanins: glutathione S-transferase, multidrug resistance-associated protein, multidrug and toxic compound extrusion, bilitranslocase-homologue. The functions of these proteins and related genes have also been studied. Although different models have been proposed, cellular and subcellular information is still lacking for reconciliation of different lines of evidence in various anthocyanin sequestration studies. According to the information available, through sequence analysis, gene expression analysis, subcellular positioning and complementation experiments, the function and location of these transporters can be explored, and the anthocyanin transport mechanism can be better understood.
Anthocyanins
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metabolism
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Biological Transport
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Glutathione Transferase
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metabolism
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Membrane Transport Proteins
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metabolism
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Multidrug Resistance-Associated Proteins
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metabolism
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Plants
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metabolism
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Vacuoles
;
metabolism
4.GRA Proteins of Toxoplasma gondii: Maintenance of Host-Parasite Interactions across the Parasitophorous Vacuolar Membrane.
The Korean Journal of Parasitology 2009;47(Suppl):S29-S37
The dense granule of Toxoplasma gondii is a secretory vesicular organelle of which the proteins participate in the modification of the parasitophorous vacuole (PV) and PV membrane for the maintenance of intracellular parasitism in almost all nucleated host cells. In this review, the archives on the research of GRA proteins are reviewed on the foci of finding GRA proteins, characterizing molecular aspects, usefulness in diagnostic antigen, and vaccine trials in addition to some functions in host-parasite interactions.
Animals
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Antigens, Protozoan/*metabolism
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Cytoplasmic Granules/metabolism
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*Host-Parasite Interactions
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Humans
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Protozoan Proteins/*metabolism
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Toxoplasma/*metabolism
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Toxoplasmosis/*parasitology
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Vacuoles/*metabolism
5.Interactions between secreted GRA proteins and host cell proteins across the paratitophorous vacuolar membrane in the parasitism of Toxoplasma gondii.
Hye Jin AHN ; Sehra KIM ; Hee Eun KIM ; Ho Woo NAM
The Korean Journal of Parasitology 2006;44(4):303-312
Interactions between GRA proteins of dense granules in Toxoplasma gondii and host cell proteins were analyzed by yeast two-hybrid technique. The cMyc-GRA fusion proteins expressed from pGBKT7 plasmid in Y187 yeast were bound to host cell proteins from pGADT7-Rec-HeLa cDNA library transformed to AH109 yeast by mating method. By the selection procedures, a total of 939 colonies of the SD/-AHLT culture, 348 colonies of the X-alpha-gal positive and PCR, 157 colonies of the X-beta-gal assay were chosen for sequencing the cDNA and finally 90 colonies containing ORF were selected to analyze the interactions. GRA proteins interacted with a variety of host cell proteins such as enzymes, structural and functional proteins of organellar proteins of broad spectrum. Several specific bindings of each GRA protein to host proteins were discussed presumptively the role of GRA proteins after secreting into the parasitophorous vacuoles (PV) and the PV membrane in the parasitism of this parasite.
Vacuoles/*metabolism
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Two-Hybrid System Techniques
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Toxoplasma/metabolism/*pathogenicity
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Protozoan Proteins/*metabolism/secretion
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Proteins/*metabolism
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Organelles/metabolism
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Intracellular Membranes/*metabolism
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Humans
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Hela Cells
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Gene Library
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Cytoplasmic Granules
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Animals
6.Regulation of vacuolar proton pumping ATPase-dependent luminal acidification in the epididymis.
Nicolas Da SILVA ; Winnie W C SHUM ; Sylvie BRETON
Asian Journal of Andrology 2007;9(4):476-482
Luminal acidification in the epididymis is an important process for the regulation of male fertility. Low pH and low bicarbonate concentration are among key factors that keep spermatozoa in a dormant state while they mature and are stored in this organ. Although significant bicarbonate reabsorption is achieved by principal cells in the proximal regions of the epididymis, clear and narrow cells are specialized for net proton secretion. Clear cells express very high levels of the vacuolar proton pumping ATPase (V-ATPase) in their apical membrane and are responsible for the bulk of proton secretion. In the present paper, selected aspects of V-ATPase regulation in clear cells are described and potential pathologies associated with mutations of some of the V-ATPase subunits are discussed.
Adenosine Triphosphatases
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metabolism
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Adenylyl Cyclases
;
metabolism
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Animals
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Bicarbonates
;
metabolism
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Epididymis
;
metabolism
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Humans
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Hydrogen-Ion Concentration
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Male
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Mice
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Proton Pumps
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metabolism
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Vacuoles
;
enzymology
7.Subcutaneous Fat Necrosis of the Lower Eyelid Associated with Anemia.
Journal of the Korean Ophthalmological Society 2008;49(3):499-502
PURPOSE: Subcutaneous fat necrosis is rare. To our knowledge, there is no report of subcutaneous fat necrosis on the lower eyelid. We report a case of subcutaneous fat necrosis of the lower eyelid related to anemia. CASE SUMMARY: A 52-year-old female patient presented with palpable masses in both lower eyelids that had persisted for the past year. The thin, shallow, plaque-like mass with a well-demarcated border was palpated on the subcutaneous tissue of both lower eyelids. There was no tenderness or signs of inflammation. histopathologically, there were variously sized fat vacuoles with mild cellular infiltration. The mass was determined to be caused by subcutaneous fat necrosis. The patient had no unusual past history except a total gastrectomy 2 years previously. We performed a blood test and detected chronic anemia. CONCLUSIONS: We report a case of chronic subcutaneous fat necrosis related to anemia. When clinicians detect the subcutaneous fat necrosis, a work-up on hematological factors affecting lipid metabolism should be performed.
Anemia
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Eyelids
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Female
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Gastrectomy
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Hematologic Tests
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Humans
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Inflammation
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Lipid Metabolism
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Middle Aged
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Necrosis
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Subcutaneous Fat
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Subcutaneous Tissue
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Vacuoles
8.Autophagy level of bone marrow mononuclear cells in patients with myelodysplastic syndromes.
Lifang GUO ; Ningbo CUI ; Huaquan WANG ; Rong FU ; Wen QU ; Erbao RUAN ; Xiaoming WANG ; Guojin WANG ; Yuhong WU ; Hong LIU ; Jia SONG ; Jing GUAN ; Limin XING ; Lijuan LI ; Huijuan JIANG ; Hui LIU ; Yihao WANG ; Chunyan LIU ; Wei ZHANG ; Zonghong SHAO
Chinese Journal of Hematology 2015;36(12):1016-1019
OBJECTIVETo investigate the change of autophagy level of bone marrow mononuclear cells(BMMNCs)in patients with myelodysplastic syndromes(MDS).
METHODSThirty- eight patients with MDS and 26 megaloblastic anemia patients were enrolled in this study. The autophagic vacuoles were observed by transmission electron microscopy (TEM) and the quantity of autophagic vacuoles was detected by monodansylcadaverine (MDC) staining. The LC3 protein positive cells were counted by immunofluorescence assays. The expression of Beclin 1, LC3A, mTOR mRNA were measured by real time PCR. The expression of Beclin 1 proteins were detected by Western blotting.
RESULTSThe autophgic vacuoles of double membrane that surrounds lysosomes appeared in MDS patients. The percentage of MDC positive cells was significantly higher in MDS patients[(9.75±2.63)%]than that of controls[(2.90± 0.89)%, P<0.05). The percentage of LC3 protein cells was also increased in MDS patients(6.13±1.03)% vs(1.5±0.58)%, P<0.05). The expression of Beclin 1 and LC3A mRNA in low-risk and intermediate-1 MDS were higher compared with controls (3.61 ± 3.02 vs 1.55 ± 1.03 and 6.56 ± 3.97 vs 1.21 ± 0.95 respectively, both P<0.05). The expression of mTOR mRNA was down- regulated in low- risk and intermediate-1 MDS compared with controls(0.39±0.37 vs 1.50±1.03, P<0.05). There were no significant difference in expression of Beclin 1, LC3 and mTOR mRNA among intermediate-2 and high-risk MDS and controls. Beclin 1 protein expression was higher in low- risk and intermediate- 1 MDS patients(1.257 ± 0.197)than that of controls(0.528±0.086)and inermediate-2 and high-risk MDS patients(0.622±0.118).
CONCLUSIONThe autophagy levels were increased in low- risk and intermediate- 1 MDS, while not enhanced in intermediate-2 MDS. Autophagy might be considered as a cell protective mechanism in MDS. The relatively defective autophagy in intermediate- 2 and high- risk MDS might contribute to disease's progression.
Apoptosis Regulatory Proteins ; metabolism ; Autophagy ; Beclin-1 ; Bone Marrow Cells ; cytology ; Humans ; Membrane Proteins ; metabolism ; Microscopy, Electron, Transmission ; Microtubule-Associated Proteins ; metabolism ; Myelodysplastic Syndromes ; pathology ; TOR Serine-Threonine Kinases ; metabolism ; Vacuoles ; ultrastructure
9.Structure and function of tonoplast Cation/H+ antiporters in plant: a review.
Yuxiu ZHANG ; Xiaojing PENG ; Tuanyao CHAI ; Chunling ZHANG ; Jinguang LIU
Chinese Journal of Biotechnology 2011;27(4):546-560
Cation transporters play important roles in modulating the concentration of intracellular metal ions. The vacuole is an important storage organelle for many ions. Cation (Ca+)/H+ antiporters (CAXs) located at vacuolar membrane are mainly involved in the Ca2+ flux into the vacuole, and appear to be capable of transporting various divalent cations to some degree. Several CAX genes have been isolated and characterized from various plants in recent years. Four domains of plant CAXs have been identified: NRR regulates Ca2+ transport by a mechanism of N-terminal autoinhibition; Ca domain and C domain confer Ca2+ and Mn2+ specificity among CAX transporters, respectively; D domain plays a part in the regulation of cytosolic pH. AtCAXs identified in Arabidopsis thaliana are involved in the growth, development and stress adaption of plant. AtCAX3 is the mainly Ca2+/H+ transporter in response to salt stress; AtCAX2 and AtCAX4 participate in transportation and detoxicification of heavy metal ions (Cd2+, Zn2+, and Mn2+) in cells under heavy metal stress, and impact root/shoot Cd partitioning in plant. These suggest that CAX genes may be useful for nutritional enhancement of plants, and for increasing phytoremediation potential. Here, the classification, structure and function of CAXs in plants are reviewed.
Antiporters
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chemistry
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physiology
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Arabidopsis
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chemistry
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Arabidopsis Proteins
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chemistry
;
physiology
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Calcium
;
metabolism
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Cation Transport Proteins
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chemistry
;
physiology
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Membrane Proteins
;
physiology
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Metals, Heavy
;
metabolism
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Plant Physiological Phenomena
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Plant Proteins
;
physiology
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Plants
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chemistry
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Proton Pumps
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chemistry
;
physiology
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Vacuoles
;
metabolism
;
physiology
10.Early phase of amyloid beta42-induced cytotoxicity in neuronal cells is associated with vacuole formation and enhancement of exocytosis.
Meng Lu LIU ; Seong Tshoo HONG
Experimental & Molecular Medicine 2005;37(6):559-566
Amyloid beta (Abeta) neurotoxicity is believed to play a critical role in the pathogenesis of Alzheimer's disease (AD) mainly because of its deposition in AD brain and its neuronal toxicity. However, there have been discrepancies in Abeta-induced cytotoxicity studies, depending on the assay methods. Comparative analysis of Abeta42-induced in vitro cytotoxicity might be useful to elucidate the etiological role of Abeta in the pathogenesis of AD. In this study, MTT, CCK-8, calcein-AM/EthD-1 assays as well as thorough microscopic examinations were comparatively performed after Abeta42 treatment in a neuronal precursor cells (NT2) and a somatic cells (EcR293). Extensive formation of vacuoles was observed at the very early stage of Abeta42 treatment in both cells. Early observation of Abeta42 toxicity as seen in vacuole formation was also shown in MTT assay, but not in CCK-8 and calcein-AM/EthD-1 assays. In addition, Abeta42 treatment dramatically accelerated MTT formazan exocytosis, implying its effect on the extensive formation of cytoplasmic vacuoles. Abeta42 seems to cause indirect inhibition on the intracellular MTT reduction as well as vacuole formation and exocytosis enhancement. Following the acute cellular dysfunction induced by Abeta42, the prolonged treatment of micromolar concentration of Abeta42 resulted in slight inhibition on redox and esterase activity. The early Abeta42-induced vacuolated morphology and later chronic cytotoxic effect in neuronal cell might be linked to the chronic neurodegeneration caused by the accumulation of Abeta42 in AD patients' brain.
Amyloid beta-Protein/*toxicity
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Animals
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Cell Death/drug effects
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Cell Line
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Dose-Response Relationship, Drug
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Exocytosis/*drug effects
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Formazans
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Neurons/*drug effects/metabolism/*pathology
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Peptide Fragments/*toxicity
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Research Support, Non-U.S. Gov't
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Tetrazolium Salts
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Time Factors
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Vacuoles/*drug effects