1.Bioinformatics analysis of the RNA binding protein DDX39 of Toxoplasma gondii.
Z YANG ; J WANG ; Y QI ; X TIAN ; X MEI ; Z ZHANG ; S WANG
Chinese Journal of Schistosomiasis Control 2023;35(4):358-365
OBJECTIVE:
To analyze the RNA binding protein of Toxoplasma gondii (TgDDX39) using bioinformatics technology, and to evaluate the immunogenicity of TgDDX39, so as to provide insights into development of toxoplasmosis vaccines.
METHODS:
The amino acid sequences of TgDDX39 were retrieved from the ToxoDB database, and the physicochemical properties, transmembrane structure domain, signal peptide sites, post-translational modification sites, coils, secondary and tertiary structures, hydrophobicity, and antigenic epitopes of the TgDDX39 protein were predicted using online bioinformatics tools, incluiding ProtParam, TMHMM 2.0, SignalP 5.0, NetPhos 3.1, COILS, SOPMA, Phyre2, ProtScale, ABCpred, SYFPEITHI and DNA-STAR.
RESULTS:
TgDDX39 protein was predicted to be an unstable hydrophilic protein with the molecular formula of C2173H3458N598O661S18, which contained 434 amino acids and had an estimated molecular weight of 49.1 kDa and a theoretical isoelectric point of 5.55. The protein was predicted to have an extremely low possibility of signal peptides, without transmembrane regions, and contain 27 phosphorylation sites. The β turn and random coils accounted for 39.63% of the secondary structure of the TgDDX39 protein, and a coiled helix tended to produce in one site. In addition, the TgDDX39 protein contained multiple B and T cell antigenic epitopes.
CONCLUSIONS
Bioinformatics analyses predict that TgDDX39 protein has high immunogenicity and contains multiple antigenic epitopes. TgDDX39 protein is a potential candidate antigen for vaccine development.
Humans
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Toxoplasma/metabolism*
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Toxoplasmosis/prevention & control*
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Vaccines
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Epitopes, T-Lymphocyte
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Computational Biology
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Protozoan Proteins/chemistry*
2.Proteomic Analysis of Toxoplasma gondii KI-1 Tachyzoites.
Si Hwan CHOI ; Tae Yun KIM ; Sung Goo PARK ; Guang Ho CHA ; Dae Whan SHIN ; Jong Yil CHAI ; Young Ha LEE
The Korean Journal of Parasitology 2010;48(3):195-201
We studied on the proteomic characteristics of Toxoplasma gondii KI-1 tachyzoites which were originally isolated from a Korean patient, and compared with those of the well-known virulent RH strain using 2-dimensional electrophoresis (2-DE), mass spectrometry, and quantitative real-time PCR. Two-dimensional separation of the total proteins isolated from KI-1 tachyzoites revealed up to 150 spots, of which 121 were consistent with those of RH tachyzoites. Of the remaining 29 spots, 14 showed greater than 5-fold difference in density between the KI-1 and RH tachyzoites at a pH of 5.0-8.0. Among the 14 spots, 5 from the KI-1 isolate and 7 from the RH strain were identified using MALDI-TOF mass spectrometry and database searches. The spots from the KI-1 tachyzoites were dense granule proteins (GRA 2, 3, 6, and 7), hypoxanthine-guanine-xanthine phosphoribosyltransferase (HGRPTase), and uracil phosphoribosyltransferase (UPRTase). The spots from the RH strain were surface antigen 1 (SAG 1), L-lactate dehydrogenase (LDH), actin, chorismate synthase, peroximal catalase, hexokinase, bifunctional dihydrofolate reductase-thymidylate synthase (DHTR-TS), and nucleoside-triphosphatases (NTPases). Quantitative real-time PCR supported our mass spectrometric results by showing the elevated expression of the genes encoding GRA 2, 3, and 6 and UPRTase in the KI-1 tachyzoites and those encoding GRA 7, SAG 1, NTPase, and chorismate synthase in the RH tachyzoites. These observations demonstrate that the protein compositions of KI-1 and RH tachyzoites are similar but differential protein expression is involved in virulence.
Electrophoresis, Gel, Two-Dimensional
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Gene Expression Regulation, Developmental
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Humans
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Molecular Sequence Data
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*Proteomics
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Protozoan Proteins/chemistry/*genetics/metabolism
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Toxoplasma/chemistry/*genetics/*growth & development/metabolism
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Toxoplasmosis/parasitology
3.Detection and characterization of excretory/secretory proteins from Toxoplasma gondii by monoclonal antibodies.
The Korean Journal of Parasitology 2001;39(1):49-56
Excretory/secretory proteins (ESP) from Toxoplasma gondii were analyzed to define the function in the penetration process into host cells. Whole ESP obtained at 37 degrees C were composed of 15 bands with molecular mass of 110, 97, 86, 80, 70, 60, 54, 42, 40, 36, 30, 28, 26, 22, and 19 kDa. Five ESP of 86, 80, 42, 36, and 28 kDa were reacted with monoclonal antibodies (mAb), named as Tg386 (microneme), Tg485 (surface membrane), Tg786 (rhoptry), Tg378, and Tg556 (both dense granules), respectively. The ESP was released by a temperature-dependent/-independent manner and all at once whenever ready to pour out except Tg786. Each ESP was not exhausted within the parasite but the amount was limited. Tg786 was released continuously with increment, whereas Tg378 and Tg556 were ceased to release after 3 and 4 hr. Dense granular Tg378 and Tg556 were released spontaneously and constitutively before the entry into host cells also. The entry of T. gondii was inhibited by all the mAbs differentially. And the parasite deprived of ESP was inhibited to enter exponentially up to 90.1%. It is suggested that ESP play an essential function to provide appropriate environment for the entry of the parasite into host cells.
Animals
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*Antibodies, Monoclonal
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*Antibodies, Protozoan
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Antigens, Protozoan/*analysis/physiology
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Mice
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Mice, Inbred BALB C
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Support, Non-U.S. Gov't
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Temperature
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Toxoplasma/*chemistry/pathogenicity
4.Sequence Variation in Superoxide Dismutase Gene of Toxoplasma gondii among Various Isolates from Different Hosts and Geographical Regions.
Shuai WANG ; Aiping CAO ; Xun LI ; Qunli ZHAO ; Yuan LIU ; Hua CONG ; Shenyi HE ; Huaiyu ZHOU
The Korean Journal of Parasitology 2015;53(3):253-258
Toxoplasma gondii, an obligate intracellular protozoan parasite of the phylum Apicomplexa, can infect all warm-blooded vertebrates, including humans, livestock, and marine mammals. The aim of this study was to investigate whether superoxide dismutase (SOD) of T. gondii can be used as a new marker for genetic study or a potential vaccine candidate. The partial genome region of the SOD gene was amplified and sequenced from 10 different T. gondii isolates from different parts of the world, and all the sequences were examined by PCR-RFLP, sequence analysis, and phylogenetic reconstruction. The results showed that partial SOD gene sequences ranged from 1,702 bp to 1,712 bp and A + T contents varied from 50.1% to 51.1% among all examined isolates. Sequence alignment analysis identified total 43 variable nucleotide positions, and these results showed that 97.5% sequence similarity of SOD gene among all examined isolates. Phylogenetic analysis revealed that these SOD sequences were not an effective molecular marker for differential identification of T. gondii strains. The research demonstrated existence of low sequence variation in the SOD gene among T. gondii strains of different genotypes from different hosts and geographical regions.
Amino Acid Sequence
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Animals
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Base Sequence
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Cats
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*Genetic Variation
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Goats
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Humans
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Molecular Sequence Data
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Phylogeny
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Protozoan Proteins/chemistry/*genetics/metabolism
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Sequence Alignment
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Sheep
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Superoxide Dismutase/chemistry/*genetics/metabolism
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Toxoplasma/classification/*enzymology/genetics/isolation & purification
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Toxoplasmosis/*parasitology
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Toxoplasmosis, Animal/*parasitology
5.High Expression of Water-Soluble Recombinant Antigenic Domains of Toxoplasma gondii Secretory Organelles.
Zhaoshou YANG ; Hye Jin AHN ; Ho Woo NAM
The Korean Journal of Parasitology 2014;52(4):367-376
Recombinant antigenic proteins of Toxoplasma gondii are alternative source of antigens which are easily obtainable for serodiagnosis of toxoplasmosis. In this study, highly antigenic secretory organellar proteins, dense granular GRA2 and GRA3, rhoptrial ROP2, and micronemal MIC2, were analyzed by bioinformatics approach to express as water-soluble forms of antigenic domains. The transmembrane region and disorder tendency of 4 secretory proteins were predicted to clone the genes into pGEX-4T-1 vector. Recombinant plasmids were transformed into BL21 (DE3) pLysS E. coli, and GST fusion proteins were expressed with IPTG. As a result, GST fusion proteins with GRA225-105, GRA339-138, ROP2324-561, and MIC21-284 domains had respectively higher value of IgG avidity. The rGST-GRA225-105 and rGST-GRA339-138 were soluble, while rGST-ROP2324-561 and rGST-MIC21-284 were not. GRA231-71, intrinsically unstructured domain (IUD) of GRA2, was used as a linker to enhance the solubility. The rGST-GRA231-71-ROP2324-561, a chimeric protein, appeared to be soluble. Moreover, rGST-GRA231-71-MIC21-284 was also soluble and had higher IgG avidity comparing to rGST-MIC21-284. These 4 highly expressed and water-soluble recombinant antigenic proteins may be promising candidates to improve the serodiagnosis of toxoplasmosis in addition to the major surface antigen of SAG1.
Animals
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Antibodies, Protozoan/immunology
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Antibody Affinity
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Antigens, Protozoan/chemistry/*diagnostic use/genetics/immunology
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*Gene Expression
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Immunoglobulin G/blood/immunology
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Mice, Inbred BALB C
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Recombinant Proteins/chemistry/*diagnostic use/genetics/immunology
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Serologic Tests/methods
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Solubility
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Toxoplasma/genetics/immunology/*metabolism
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Toxoplasmosis/diagnosis
6.Interaction between Parasitophorous Vacuolar Membraneassociated GRA3 and Calcium Modulating Ligand of Host Cell Endoplasmic Reticulum in the Parasitism of Toxoplasma gondii.
Ji Yeon KIM ; Hye Jin AHN ; Kyung Ju RYU ; Ho Woo NAM
The Korean Journal of Parasitology 2008;46(4):209-216
A monoclonal antibody against Toxoplasma gondii of Tg556 clone (Tg556) blotted a 29 kDa protein, which was localized in the dense granules of tachyzoites and secreted into the parasitophorous vacuolar membrane (PVM) after infection to host cells. A cDNA fragment encoding the protein was obtained by screening a T. gondii cDNA expression library with Tg556, and the full-length was completed by 5'-RACE of 2,086 bp containing an open reading frame (ORF) of 669 bp. The ORF encoded a polypeptide of 222 amino acids homologous to the revised GRA3 but not to the first reported one. The polypeptide has 3 hydrophobic moieties of an N-terminal stop transfer sequence and 2 transmembrane domains (TMD) in posterior half of the sequence, a cytoplasmic localization motif after the second TMD and an endoplasmic reticulum (ER) retrival motif in the C-terminal end, which suggests GRA3 as a type III transmembrane protein. With the ORF of GRA3, yeast two-hybrid assay was performed in HeLa cDNA expression library, which resulted in the interaction of GRA3 with calcium modulating ligand (CAMLG), a type II transmembrane protein of ER. The specific binding of GRA3 and CAMLG was confirmed by glutathione S-transferase (GST) pull-down and immunoprecipitation assays. The localities of fluorescence transfectionally expressed from GRA3 and CAMLG plasmids were overlapped completely in HeLa cell cytoplasm. In immunofluorescence assay, GRA3 and CAMLG were shown to be co-localized in the PVM of host cells. Structural binding of PVM-inserted GRA3 to CAMLG of ER suggested the receptor-ligand of ER recruitment to PVM during the parasitism of T. gondii.
Adaptor Proteins, Signal Transducing/*metabolism
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Amino Acid Sequence
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Animals
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Endoplasmic Reticulum/*metabolism
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Hela Cells
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Host-Parasite Interactions
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Humans
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Molecular Sequence Data
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Protozoan Proteins/chemistry/genetics/*metabolism
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Toxoplasma/*physiology
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Toxoplasmosis/metabolism/parasitology
7.Resistance to Toxoplasma gondii Infection in Mice Treated with Silk Protein by Enhanced Immune Responses.
Joung Ho MOON ; Kyoung Ho PYO ; Bong Kwang JUNG ; Hyang Sook CHUN ; Jong Yil CHAI ; Eun Hee SHIN
The Korean Journal of Parasitology 2011;49(3):303-308
This study investigated whether elevated host immune capacity can inhibit T. gondii infection. For this purpose, we used silk protein extracted from Bombyx mori cocoons as a natural supplement to augment immune capacity. After silk protein administration to BALB/c mice for 6 weeks, ratios of T lymphocytes (CD4+ and CD8+ T-cells) and splenocyte proliferative capacities in response to Con A or T. gondii lysate antigen (TLA) were increased. Of various cytokines, which regulate immune systems, Th1 cytokines, such as IFN-gamma, IL-2, and IL-12, were obviously increased in splenocyte primary cell cultures. Furthermore, the survival of T. gondii (RH strain)-infected mice increased from 2 days to 5 or more days. In a state of immunosuppression induced by methylprednisolone acetate, silk protein-administered mice were resistant to reduction in T-lymphocyte (CD4+ and CD8+ T-cells) numbers and the splenocyte proliferative capacity induced by Con A or TLA with a statistical significance. Taken together, our results suggest that silk protein augments immune capacity in mice and the increased cellular immunity by silk protein administration increases host protection against acute T. gondii infection.
Animals
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Bombyx/*chemistry
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CD4-CD8 Ratio
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Cell Proliferation
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Cells, Cultured
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Cytokines/secretion
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Insect Proteins/*immunology
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Leukocytes, Mononuclear/immunology
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Male
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Mice
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Mice, Inbred BALB C
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Silk/immunology
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Spleen/immunology
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Survival Analysis
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Toxoplasma/*immunology/pathogenicity
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Toxoplasmosis, Animal/immunology/*prevention & control
8.Molecular cloning and characterization of peroxiredoxin from Toxoplasma gondii.
Eui Sun SON ; Kyoung Ju SONG ; Jong Chul SHIN ; Ho Woo NAM
The Korean Journal of Parasitology 2001;39(2):133-141
A cDNA of 1.1 kb comprising the gene encoding the peroxiredoxin of Toxoplasma gondii (TgPrx) has been cloned. The open reading frame of 591 bp was translated into a protein of 196 amino acids with a molecular mass of 25 kDa. Conserved 2 cysteine domains of Phe-Val-Cys-Pro and Glu-Val-Cys-Pro indicated TgPrx belonged to 2-Cys Prx families. TgPrx showed the highest homology with that of Arabidopsis thaliana by 53.9% followed by Entamoeba histolytica with 39.5% by the amino acid sequence alignment. Polyclonal antibody against recombinant TgPrx detected 25 kDa band in T. gondii without binding to host cell proteins. TgPrx was located in the cytoplasm of T. gondii extracellularly or intracellularly by immunofluorescence assay. The expression of TgPrx was increased as early as 30 min after the treatment with artemisinin in the intracellular stage, while no changes in those of host Prx I and TgSOD. This result implies that TgPrx may function as an antioxidant protecting the cell from the attack of reactive oxygen intermediates. It is also suggested that TgPrx is a possible target of chemotherapy.
Amino Acid Sequence
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Animals
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Antioxidants
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*Artemisinins
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Base Sequence
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*Cloning, Molecular
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Cysteine/metabolism
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Molecular Sequence Data
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Nucleic Acid Amplification Techniques
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Peroxidases/chemistry/*genetics/physiology
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Sesquiterpenes/pharmacology
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Support, Non-U.S. Gov't
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Toxoplasma/*enzymology
9.Fulminant Toxoplasmic Chorioretinitis Following Intravitreal Dexamethasone Implantation
Areum JEONG ; Dong Geun PARK ; Min SAGONG
Journal of the Korean Ophthalmological Society 2019;60(9):896-900
PURPOSE: To report a case of fulminant toxoplasmic chorioretinitis following intravitreal dexamethasone implantation monotherapy in a stabilized toxoplasmic chorioretinitis patient with initial treatment. CASE SUMMARY: A 60-year-old healthy female presented with decreased visual acuity in the left eye. On fundus examination, focal chorioretinitis and yellow-white infiltration were observed. Laboratory work-up, including blood chemistry, complete blood count, and serum serology, was negative; however, toxoplasmic chorioretinitis could not be ruled out. The primary lesion improved with antibiotics and prednisolone treatment. However, the patient did not come in for her follow-up visit, as she had already received an intravitreal dexamethasone implant for recurrent vitreous inflammation elsewhere. On her return, she presented with necrotic retinitis with extensive infiltration. She underwent diagnostic vitrectomy and implant removal. A diagnosis of toxoplasma antigen was confirmed by polymerase chain reaction analysis; the lesions stabilized after anti-toxoplasmic therapy. CONCLUSIONS: Intravitreal dexamethasone implant monotherapy with stabilized toxoplasmic chorioretinitis without systemic antibiotics can lead to fulminant toxoplasmic chorioretinitis and should be used with caution.
Anti-Bacterial Agents
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Blood Cell Count
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Chemistry
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Chorioretinitis
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Dexamethasone
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Diagnosis
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Female
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Follow-Up Studies
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Humans
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Inflammation
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Intravitreal Injections
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Middle Aged
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Polymerase Chain Reaction
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Prednisolone
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Retinitis
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Toxoplasma
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Toxoplasmosis
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Visual Acuity
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Vitrectomy
10.Primary structure of mature SAG1 gene of an Indonesian Toxoplasma gondii and comparison with other strains.
Sri HARTATI ; Asmarani KUSUMAWATI ; Hastari WURYASTUTI ; J Sri WIDADA
Journal of Veterinary Science 2006;7(3):263-270
Toxoplasma gondii is a persistent protozoan parasite capable of infecting almost any warm-blooded vertebrates. SAG1 (p30) is the prototypic member of a superfamily of surface antigens called SRS (SAG1-related sequence). It constitutes the most abundant and predominant antigen. In this paper the primary structure of mature SAG1 gene of an Indonesian T. gondii isolate is described and sequence comparison is made with published sequence data of 7 other strains or isolates. Sequence comparison indicated that SAG1 is highly conserved through evolution and despite parasite spreading world-wide. Sequences may be divided into two major families, independent of the strain/isolate geographic origin. Variations were mainly localized at the C-terminal half or domain 2 and some clustered in restricted areas. Sequence comparison allowed us to define the Indonesian isolate as genuine virulent RH strain. A phylogenetic tree of Toxoplasma strains/isolates was constructed based on SAG1.
Amino Acid Sequence
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Animals
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Antigens, Protozoan/chemistry/*genetics
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Base Sequence
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Cloning, Molecular
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DNA, Protozoan/chemistry/genetics
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Goat Diseases/parasitology
;
Goats
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Indonesia
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Molecular Sequence Data
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Phylogeny
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Polymerase Chain Reaction
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Protozoan Proteins/chemistry/*genetics
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Sequence Alignment
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Sequence Analysis, DNA
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Toxoplasma/*genetics/*immunology/isolation&purification
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Toxoplasmosis/parasitology
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Zoonoses/parasitology