1.Analysis of sequence and genotype of E gene of the newly isolated Japanese encephalitis virus strains in Wuhan, Hubei Province.
Ze-rong ZHU ; Jun-hua TIAN ; Bang-hua CHEN ; Jin-song PENG ; Tai-ping WU ; Quan HU
Chinese Journal of Experimental and Clinical Virology 2011;25(4):258-261
OBJECTIVETo analyze the molecular characteristics of the newly isolated two Japanese encephalitis virus strains (JEV) in Wuhan.
METHODSThe mosquitoes were collected in Wuhan from April to October in 2009. The envelope (E) protein gene of JEV was detected using RT-PCR and sequenced. Sequence comparisons and phylogenetic analysis were conducted using DNAstar and MegAlign.
RESULTSTwo Japanese encephalitis virus (JEV) strains (WHJX09-9, WHJX09-10) were isolated from Culex tritaeniorhynchus among 16 mosquito pools and identified as genotype I. The result showed that the homology of the two strains was 98. 9% in nucleotides and 100% in deduced amines. The comparison between the new genotype 1 JEV strains and live attenuated vaccine strain SA14-14-2 in E gene showed that the homology of nucleotide sequence was 87.4% and 87.9%, the homology of amino acid was 96.9% (total 15 amino acid were different) in E gene. The mutation sites of amino acid distributed among three different coding domain, but no antigen binding site and neurotoxin-involved site of amino acid were changed.
CONCLUSIONWuhan had appeared a new genotype of JEV which was different from the former strain isolated in Wuhan, the new JEV strains still had neurotoxicity but had high homology with the vaccine strains adopted in Wuhan. The vaccine could still be adopted to prevent Japanese encephalitis if steps were take to eradicate mosquitos at the same time. laboratory surveillance were also an important task to build an early-warning mechanism against JEV.
Amino Acid Sequence ; Animals ; Cell Line ; China ; Culicidae ; virology ; Encephalitis Virus, Japanese ; chemistry ; classification ; genetics ; isolation & purification ; Genotype ; Insect Vectors ; virology ; Molecular Sequence Data ; Phylogeny ; Sequence Alignment ; Viral Envelope Proteins ; chemistry ; genetics
2.Analysis of directional preponderance of caloric test in evaluation of vestibular dynamic compensation.
Peng LIN ; Hong DONG ; Tai-sheng CHEN ; Liang LI ; Hong-hua LU ; Wei SONG ; Yuan-xu MA ; Na WANG ; Shi-ping SUN
Chinese Journal of Otorhinolaryngology Head and Neck Surgery 2009;44(8):631-635
OBJECTIVETo analyze the value of directional preponderance (DP) in vestibular dynamic compensation evaluation.
METHODSOne hundred fifty-five patients with sudden deafness accompanied vertigo were asked to accept routine vestibular tests including the spontaneous nystagmus (SN) and caloric test with video-nystagmography. DP, SN and unilateral weakness (UW) were selected as the observation parameters. Then the correlation analysis between DP, SN, UW and course of disease were investigated respectively. The change characteristic of the three parameters was also analyzed in the course of vestibular compensation.
RESULTSOf the 155 patients, there were negative correlations between SN, DP and course of disease (r(s) = -0.386, r(s) = -0.424, P < 0.05), positive correlation between SN and DP (r(s) = 0.543, P < 0.05), but no correlation between UW and course of disease (r(s) = 0.004, P > 0.05), and also positive correlation (r(s) = 0.274, P < 0.05) between DP and UW. According to three parameters were positive or negative, three main groups (DP+UW+SN+, DP+UW+SN- and DP-UW+SN-) in DP, UW, SN. The course of disease in three main groups was positively skewed distribution. Median was 6 days, 10 days and 20 days respectively. Through Kruskal-Wallis Test, chi(2) = 24.63, P < 0.05, there was statistical significance among the above three main groups.
CONCLUSIONSDP keeps on changing in the acute stage, static and dynamic compensation stage of peripheral vestibular disease. This indicates that DP can be considered as an objective evaluation index of vestibular dynamic compensation and as a guidance of the vestibular rehabilitation evaluation.
Adolescent ; Adult ; Aged ; Aged, 80 and over ; Caloric Tests ; Electronystagmography ; Female ; Hearing Loss, Sudden ; complications ; diagnosis ; physiopathology ; Humans ; Middle Aged ; Vertigo ; complications ; diagnosis ; physiopathology ; Vestibular Function Tests ; Young Adult
3.Imaging manifestations of renal primary neuroectodermal tumors.
Xi-Wen NAN ; Guang-Jian TANG ; Jian-Guo XU ; Tai-Song PENG ; Lai-Sheng MIAO ; Zhi-Gao XU ; Cong BAI ; Ping YU ; Yong-Li GAO ; Bao-Tang HAO
Chinese Medical Journal 2012;125(19):3595-3597
4.Analysis of the epidemic characteristics of common allergens in 10 664 patients in Zhengzhou area from 2013 to 2021
Shuhong TAI ; Yuanyu WEI ; Xiaoyan SONG ; Yuan WANG ; Chao NIU ; Peng WANG
Chinese Journal of Clinical Laboratory Science 2024;42(1):18-21
Objective To invesitgate the epidemiological characteristics of common allergens in 10 664 patients with allergic diseases in Zhengzhou area.Methods A total of 10 664 patients visited our hospital and underwent serum allergen screening during January 2013 and August 2021 were selected,and their serum sIgE results were retrospectively analyzed.Results The total positive rate of sIgE to allergens in 10 664 patients was 69.82%.The positive rate of sIgE to inhalant allergens was significantly higher than that to in-gestive allergens(χ2=99.15,P<0.01).The top three inhalant allergens were grass and tree combination,dust mite combination,and cockroach.The top three ingestive allergens were egg protein,milk,and seafood combination.The positive rate of sIgE to ingestive al-lergens in males was significantly higher than that in females(χ2=8.18,P<0.01).The highest positive rate of sIgE to ingestive aller-gens was found in the early childhood period(χ2=125.92,P<0.05).The highest positive rate of sIgE to inhalant allergens was found in the school-age and preschool periods(χ2=283.76,P<0.01).The proportions of sIgE to cockroach and house dust mite showed a de-creasing trend year by year,while the proportions of sIgE to milk,peanut,lamb,and seafood combination showed an increasing trend year by year.Conclusion The top three inhalant and ingestive allergens in Zhengzhou area are grass and tree combination,dust mite,cockroach and egg protein,milk,seafood combination,respectively.In recent years,the allergies to milk,peanut,lamb,and seafood should be paid attention.
5.Three-dimensional computed tomographic angiography in hemorrhagic cerebral arteriovenous malformation
Jian-Rong LI ; Zheng-Li CHEN ; Sheng-Hu WANG ; Shi-tai E Y ; Hai-Peng PAN ; Cheng-Hao LI ; Shu-Chao WANG ; Xue-Song LIU
Chinese Journal of Neuromedicine 2011;10(9):948-949
Objective To assess the value of three-dimensional computed tomographic angiography (3D-CTA) in hemorrhagic cerebral arteriovenous malformation (AVM). Methods Nineteen patients with hemorrhagic cerebral AVM, admitted to our hospital from March 2007 to February 2011 and conformed by digital subtraction angiography (DSA) and operation, were examined by 3D-CTA. Results In these19 patients, 14 were noted as having AVM in the first examination of which 4 were performed surgical operation (hematoma evacuation and removal of abnormal vessels) directly by the lead of CTA images; the postoperative CTA images and DSA showed that the cerebral AVMs in these 4 patients were removed completely. Three patients, having negative results in the 1st 3D-CTA and DSA examinations, showed abnormal blood vessel mass by CTA re-check after 1 year; they were confirmed by DSA and operation. Two patients, having negative results in the 1st and 2nd Week's 3D-CTA examination,were noted as having small AVMS in DSA. Conclusion The 3D-CTA, being a non-injured, rapid,safe and effective way, can provide details and spacial relation image of the AVM which can assist the surgeon to possible intraoperative design; therefore, it fits for emergency examination of hemorrhagic
6.Single Nucleotide Polymorphism rs10919543 in FCGR2A/FCGR3A Region Confers Susceptibility to Takayasu Arteritis in Chinese Population.
Fang QIN ; Hu WANG ; Lei SONG ; Xi-Li LU ; Li-Rui YANG ; Er-Peng LIANG ; Wei WANG ; Yu-Bao ZOU ; Jin BIAN ; Hai-Ying WU ; Xian-Liang ZHOU ; Ru-Tai HUI ; Hui-Min ZHANG ; Xiong-Jing JIANG
Chinese Medical Journal 2016;129(7):854-859
BACKGROUNDTakayasu arteritis (TA) is a rare inflammatory arteriopathy of unknown etiology. The aim of this study was to investigate the genetic susceptibility to TA in a Chinese population.
METHODSFour single nucleotide polymorphisms (SNPs) those locate in the IL12B region (rs56167332), the MLX region (rs665268), the FCGR2A/FCGR3A locus (rs10919543), and the HLA-B/MICA locus (rs12524487), associated with TA in different population, were genotyped in 123 Chinese TA patients and 147 healthy controls from January 2013 to August 2014. A Chi-square test was used to test for genotype/allele frequencies variants.
RESULTSAmong the four SNPs, rs10919543 was found to be significantly associated with TA in the studied population. The GG genotype of rs10919543 at the FCGR2A/FCGR3A locus is a high risk factor (odds ratio [OR] = 6.532, 95% confidence interval [CI] = 2.402 - 17.763, P < 0.001) for TA. Among TA patients, the level of eosinophil granulocytes (Eos) in the peripheral blood was observed to be higher in the GG group of rs10919543 (n = 23, Eos = 0.11 [0.08, 0.17] ×109/L) than the GA + AA group (n = 100, Eos = 0.08 [0.05, 0.13] ×109/L, P = 0.028). No correlation between the genotypes of the other three SNPs and TA patients was observed.
CONCLUSIONSOur findings revealed unique genetic pattern in Chinese TA patients that may be partly responsible for the higher risk of TA in this population. FCGR2A/FCGR3A-related immune disorder might contribute to the etiology of TA.
Adolescent ; Adult ; Child ; Female ; Genetic Predisposition to Disease ; Humans ; Male ; Middle Aged ; Polymorphism, Single Nucleotide ; Receptors, IgG ; genetics ; Takayasu Arteritis ; etiology ; genetics
7.Effect of Cyr61 on Imatinib Resistance in Chronic Myeloid Leukemia and Its Mechanism.
Yan-Fang SONG ; Li LUO ; Peng-Chong SHI ; Zhao-Zhong LI ; Tai-Gang ZHANG ; Ying-Ping CAO ; Xian-Jin ZHU
Journal of Experimental Hematology 2023;31(1):1-7
OBJECTIVE:
To investigate the effect of Cyr61 on imatinib (IM) resistance in chronic myeloid leukemia (CML) and its mechanism.
METHODS:
Cyr61 level in cell culture supernatant was determined by enzyme-linked immunosorbent assay. The expression of Cyr61 and Bcl-xL were measured by real-time PCR and Western blot. Cell apoptosis was analyzed using an Annexin V-APC Kit. Expression of signal pathways related proteins was determined by Western blot.
RESULTS:
The level of Cyr61 obviously increased in K562G cells (IM resistance to CML cell line K562). Down-regulating the expression of Cyr61 decreased the resistance of K562G cells to IM and promoted IM induced apoptosis. In CML mouse model, down-regulating the expression of Cyr61 could increase the sensitivity of K562G cells to IM. The mechanism studies showed that Cyr61 mediated IM resistance in CML cells was related to the regulation of ERK1/2 pathways and apoptosis related molecule Bcl-xL by Cyr61.
CONCLUSION
Cyr61 plays an important role in promoting IM resistance of CML cells. Targeting Cyr61 or its related effectors pathways may be one of the ways to overcome IM resistance of CML cells.
Animals
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Humans
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Mice
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Apoptosis
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Drug Resistance, Neoplasm
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Imatinib Mesylate/pharmacology*
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K562 Cells
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Leukemia, Myelogenous, Chronic, BCR-ABL Positive/metabolism*
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Signal Transduction
8.Pelvic Injury Discriminative Model Based on Data Mining Algorithm.
Fei-Xiang WANG ; Rui JI ; Lu-Ming ZHANG ; Peng WANG ; Tai-Ang LIU ; Lu-Jie SONG ; Mao-Wen WANG ; Zhi-Lu ZHOU ; Hong-Xia HAO ; Wen-Tao XIA
Journal of Forensic Medicine 2022;38(3):350-354
OBJECTIVES:
To reduce the dimension of characteristic information extracted from pelvic CT images by using principal component analysis (PCA) and partial least squares (PLS) methods. To establish a support vector machine (SVM) classification and identification model to identify if there is pelvic injury by the reduced dimension data and evaluate the feasibility of its application.
METHODS:
Eighty percent of 146 normal and injured pelvic CT images were randomly selected as training set for model fitting, and the remaining 20% was used as testing set to verify the accuracy of the test, respectively. Through CT image input, preprocessing, feature extraction, feature information dimension reduction, feature selection, parameter selection, model establishment and model comparison, a discriminative model of pelvic injury was established.
RESULTS:
The PLS dimension reduction method was better than the PCA method and the SVM model was better than the naive Bayesian classifier (NBC) model. The accuracy of the modeling set, leave-one-out cross validation and testing set of the SVM classification model based on 12 PLS factors was 100%, 100% and 93.33%, respectively.
CONCLUSIONS
In the evaluation of pelvic injury, the pelvic injury data mining model based on CT images reaches high accuracy, which lays a foundation for automatic and rapid identification of pelvic injuries.
Algorithms
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Bayes Theorem
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Data Mining
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Least-Squares Analysis
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Support Vector Machine