1.Surveillance and genetic characteristics of echovirus 6 strains isolated from environmental sewage and aseptic encephalitis cases
Xiaojuan LIN ; Suting WANG ; Zexin TAO ; Guifang LIU ; Lizhi SONG ; Aiqiang XU
Chinese Journal of Microbiology and Immunology 2016;36(3):161-165
Objective To analyze the genetic characteristics of echovirus 6 ( E-6) strains isolated from patients with acute meningitis/encephalitis syndrome ( AMES) in 2014 and sewage samples in 2013—2014 in Shandong province and to investigate their correlations.Methods Enterovirus strains were isolated from cerebrospinal fluid, stool and throat swab samples collected from 940 cases of AMES and 96 sewage samples used for environmental surveillance.The positive isolates were identified by molecular typing meth-od.Homologous and phylogenetic analyses based on the VP1 sequences of E-6 isolates were performed.Re-sults Altogether 47 E-6 strains were isolated from patients with AMES in 2014, accounting for 29.56%of all isolated enteroviruses ( EVs) strains.No E-6 strains were isolated from AMES cases in 2013.Data of the environmental surveillance showed that E-6 virus strains had been frequently detected in sewage samples since the summer of 2013 to the end of 2014.In total, 40 E-6 virus strains were isolated (7.87% of total isolated EVs strains) in 2013 and 139 E-6 virus strains (26.18%) in 2014.Phylogenetic analysis indicated that the E-6 isolates recruited in this study belonged to clusters A and C with high intracluster sequence iden-tities between AMES and environmental isolates.The nucleotide identities were 98.3%-100% among cluster A E-6 virus strains isolated from AMES cases in 2014 and 96.6%-100% among cluster A E-6 virus environ-mental isolates during the surveillance year 2013—2014.The cluster A E-6 virus strains shared 97.1%-100% nucleotide identities between the AMES and environmental isolates.For cluster C E-6 virus strains, the nucleotide identities were 100%, 98.7%-100% and 99.1%-100%, respectively.Conclusion The epidemic of viral encephalitis in Shandong province in 2014 was associated the transmission of two lineages of E-6 virus.Environmental surveillance revealed the potential epidemic of E-6 virus even before the epidemic of viral encephalitis in Shandong province, indicating the possibility of using environmental surveillance for early warning of related diseases.
2.Primary researches on human genetically engineered antibodies to HIV-1
Sihong XU ; Runlei DU ; Suting WANG ; Aijing SONG ; Xiuhua LI ; Mifang LIANG ; Youchun WANG
Chinese Journal of Microbiology and Immunology 2010;30(11):1057-1062
Objective To pan and characterize anti-HIV-1 Fab by the phage antibody library technology. Methods Total RNA were extracted from lymphocytes which were isolated from peripheral blood collected from asymptomatic HIV-1 infected donors with high titer antibody against HIV-1. The genes of heavy chains Fd fragment and light chains of antibody were amplified by RT-PCR. The phagmids pComb3X cloned Fd and light chain genes were transformed into E. coli XL1-Blue by electroporation to construct phage Fab library. By three runs of "absorption-elution-neutralization-enrichment", the clones were induced by IPTG and characterized by ELISA. The positive clones were sequenced and analyzed the sequences. Subsequently, Fab antibodies of these positive clones were induced to expressed and purified, then the recombinant virus neutralization assay was performed. Results A phage Fab library was constructed with 8×106 members, and 11 positive clones were obtained by detecting IPTG-induced-expressing Fabs with ELISA. By analysis of the sequences, 10 light chain genes and 8 Fd genes were ensured to be obtained. Compared with the genes of anti-HIV-1 antibodies in HIV sequence database, the gene sequences we obtained were highly homologous to some patent genes of anti-HIV-1 gp120 antibodies in HIV sequence database( light chains with 60%-90% identity, Fd with 71%-85% identity); The CDRs of these positive clones were determined by comparing the positive clone genes with antibodies' genes in V base database, furthermore, CDRH3 of these positive clones has the length of 12-22 aa. Strand shift had little effect to improving affinity of our Fab clones. Fab antibodies were induced to express at the concentration of > 10 mg/L. Three Fab antibodies neutralize HIV-1 virus to some extent. Conclusion The studies will provide the basis on further study on the anti-HIV-1 Fabs obtained successfully.
3.Investigation of a Patient with Pre-vaccine-derived Poliovirus in Shandong Province, China.
Xiaojuan LIN ; Yao LIU ; Suting WANG ; Zhang XIAO ; Lizhi SONG ; Zexin TAO ; Feng JI ; Ping XIONG ; Aiqiang XU
Chinese Journal of Virology 2015;31(5):542-547
To analyze the genetic characteristics of a polio-I highly variant vaccine recombinant virus in Shandong Province (China) in 2011 and to identify isolates from healthy contacts, two stool specimens from one patient with acute flaccid paralysis (AFP) and 40 stool specimens from his contacts were collected for virus isolation. The complete genome of poliovirus and VP1 coding region of the non-polio enterovirus were sequenced. Homologous comparison and phylogenetic analyses based on VP1 sequences were undertaken among coxsackievirus (CV) B1, CV-B3 isolates, and those in GenBank. One poliovirus (P1/11186), CV-A4 and CV-A8 were isolated from the AFP patient; one CV-A2, Echovirus 3 (E-3), E-12 and E-14, ten CV-B1, and five CV-B3 strains were isolated from his contacts. These results led us to believe that there may be a human enterovirus epidemic in this area, and that surveillance must be enhanced. P1/11186 was a type-1 vaccine-related poliovirus; it combined with type-2 and type-3 polioviruses in 2A and 3A regions, respectively. There were 25 nucleotide mutations with 9 amino-acid alterations in the entire genome. There were 8 nucleotide mutations with 5 amino-acid alterations in the VP1 region compared with the corresponding Sabin strains. Homology analyses suggested that the ten CV-B1 isolates had 97.0%-100% nucleotide and 98.9%-100% amino-acid identities with each other, as well as 92.6%-100% nucleotide and 99.2%-100% amino-acid identities among the five CV-B3 isolates. Phylogenetic analyses on the complete sequences of VP1 among CV-B1 and CV-B3 isolates showed that Shandong strains, together with strains from other provinces in China, had a close relationship and belonged to the same group.
Base Sequence
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Capsid Proteins
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genetics
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immunology
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Child, Preschool
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China
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Humans
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Male
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Molecular Sequence Data
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Phylogeny
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Poliomyelitis
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etiology
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prevention & control
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virology
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Poliovirus
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classification
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genetics
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immunology
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isolation & purification
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Poliovirus Vaccines
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adverse effects
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genetics
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immunology
4.Influence of nursing intervention on the effect of Lingpixin in the prevention of urinary tract infection of indwelling urinary catheter in radical hysterectomy
Feifei HUANG ; Suting SONG ; Qing ZHOU ; Xiaoxia CHEN
Journal of Clinical Medicine in Practice 2014;(12):67-69,73
Objective To observe influence of nursing intervention on the effect of Ling-pixin in the prevention of urinary tract infection of indwelling urinary catheter in radical hysterecto-my so as to improve the quality of life of patients.Methods 200 patients with first radical hys-terectomy were equally divided into control group and observation group.The patients in the con-trol group were given radical hysterectomy,and were given conventional nursing measures with Chlorhexidine after indwelling catheter.The patients in the observation group were added the Lingpixin spray twice a day based on the treatment in the control group.The incidence of urinary tract infection on the third day,the seventh day and the tenth day after indwelling catheter and the fourteenth day taking off the catheter were compared in the two groups.The occurrence rate of du-ration time of vaginal secretion after treatment and scab of vaginal discharge was compared in the two groups.The occurrence rate of allergic reactions such as itching and hot sensation in the ad-ministration site was compared.Results The incidence rate of urinary tract infection of the pa-tients in the observation group after catheter on the third day,the seventh day,the tenth day and the fourteenth day was significantly lower than that in the control group(P <0.05).The duration time of vaginal secretion of patients in the control group was (23.78±3.74)d,which was higher thanthat in the observation group (6 .5 2 ± 1 .0 9 )d ,the difference was statistical significant (P <0.01).The incidence rate of scab of vaginal discharge of patients in the control group was significantly higher than that in the observation group (P <0.05).The occurrence rate of allergic reactions such as itching and hot sensation in the administration site of patients in the control group was higher than that in the observation group,the difference was not statistical significant (P >0.05).Conclusion The Lingpixin nursing intervention for the patients with radical hys-terectomy could significantly reduce the incidence rate of urinary tract infection after indwelling urinary catheter,shorten the duration time of vaginal secretion,reduce the scab of vaginal dis-charge and improve quality of life of patients,so it is worthy of widely application in clinic.
5.Influence of nursing intervention on the effect of Lingpixin in the prevention of urinary tract infection of indwelling urinary catheter in radical hysterectomy
Feifei HUANG ; Suting SONG ; Qing ZHOU ; Xiaoxia CHEN
Journal of Clinical Medicine in Practice 2014;(12):67-69,73
Objective To observe influence of nursing intervention on the effect of Ling-pixin in the prevention of urinary tract infection of indwelling urinary catheter in radical hysterecto-my so as to improve the quality of life of patients.Methods 200 patients with first radical hys-terectomy were equally divided into control group and observation group.The patients in the con-trol group were given radical hysterectomy,and were given conventional nursing measures with Chlorhexidine after indwelling catheter.The patients in the observation group were added the Lingpixin spray twice a day based on the treatment in the control group.The incidence of urinary tract infection on the third day,the seventh day and the tenth day after indwelling catheter and the fourteenth day taking off the catheter were compared in the two groups.The occurrence rate of du-ration time of vaginal secretion after treatment and scab of vaginal discharge was compared in the two groups.The occurrence rate of allergic reactions such as itching and hot sensation in the ad-ministration site was compared.Results The incidence rate of urinary tract infection of the pa-tients in the observation group after catheter on the third day,the seventh day,the tenth day and the fourteenth day was significantly lower than that in the control group(P <0.05).The duration time of vaginal secretion of patients in the control group was (23.78±3.74)d,which was higher thanthat in the observation group (6 .5 2 ± 1 .0 9 )d ,the difference was statistical significant (P <0.01).The incidence rate of scab of vaginal discharge of patients in the control group was significantly higher than that in the observation group (P <0.05).The occurrence rate of allergic reactions such as itching and hot sensation in the administration site of patients in the control group was higher than that in the observation group,the difference was not statistical significant (P >0.05).Conclusion The Lingpixin nursing intervention for the patients with radical hys-terectomy could significantly reduce the incidence rate of urinary tract infection after indwelling urinary catheter,shorten the duration time of vaginal secretion,reduce the scab of vaginal dis-charge and improve quality of life of patients,so it is worthy of widely application in clinic.
6.Construction, expression, purification and neuroprotective activity of TAT-FGF21 fusion protein
Suting CHEN ; Song CHEN ; Xiangdong GAO
Journal of China Pharmaceutical University 2018;49(4):496-501
In order to improve the brain distribution of fibroblast growth factor 21(FGF21), TAT-FGF21 fusion protein was designed and its neuroprotective activity was investigated. The recombinant plasmid of pET28a-TAT-FGF21 was constructed and transformed into E. coli BL-21(DE3)sensitive bacteria. The TAT-FGF21 fusion protein was purified by Ni-NTA affinity chromatography column after IPTG induced expression. The SH-SY5Y cell damage model was induced by Aβ25-35, and the TAT-FGF21 fusion protein was used to intervene. The effects of Aβ25-35 and TAT-FGF21 induced on SH-SY5Y cell viability were determined using MTT method; DCFH-DA fluorescent probe was used to detect the intervention effect TAT-FGF21 on reactive oxygen species(ROS)generation induced by Aβ25-35 in SH-SY5Y cells; the effects of Aβ25-35 and TAT-FGF21 on mitochondrial membrane potential in SH-SY5Y cells were detected with JC-1 fluorescent probe. The results showed that TAT-FGF21 could improve the viability of SH-SY5Y cells, reduce the intracellular ROS production level of SH-SY5Y cells, and enhance the mitochondrial membrane potential of SH-SY5Y cells, which indicate that TAT-FGF21 could protect neurons on SH-SY5Y cell injury induced by Aβ25-35 through alleviating oxidative damage.
7.Etiologic surveillance and analysis of acute meningitis and encephalitis syndrome in Jinan city in 2013-2016
Xiaojuan LIN ; Guifang LIU ; Min WANG ; Zexin TAO ; Suting WANG ; Lizhi SONG ; Li ZHANG ; Aiqiang XU
Chinese Journal of Preventive Medicine 2019;53(2):174-178
Objective To characterize the etiology and epidemiological characteristics of the acute meningitis and encephalitis syndrome (AMES) in Jinan city in 2013-2016. Methods The epidemiological data, clinical diagnosis, serum and cerebrospinal fluid (CSF) specimens were collected from 3 577 AMES cases in 6 sentinel hospitals in Jinan city in 2013-2016. Samples of all cases were made sero?diagnosis for Immunoglobulin (Ig) M antibody to Japanese encephalitis virus (JEV) and negative cases of JEV for enterovirus (EV), mumps virus (MuV) and herpes simplex virus (HSV) by enzyme?linked immunosorbent assay (ELISA). Virus isolation and molecular identification were performed. Positive rates were analyzed by Chi?square test. Results In 2013-2016, the positive rates of JEV, EV, MuV and HSV were 9.0% (322/3 577 cases), 22.1% (643/ 2 916 cases), 9.9% (289/2 916 cases), 26.9% (783/2 916), respectively. Of these, the positive rates of JEV were 32.9% (261/794), 1.2% (14/1 175), 1.0% (8/807) and 4.9% (39/801 cases); EV: 19.5% (91/466), 35.1% (342/974 cases), 15.5% (115/743) and 13.0% (95/733);MuV: 9.2% (43/466), 14.4% (140/974), 9.0% (67/743) and 5.3% (39/733). HSV: 35.4% (165/466), 38.5% (375/974), 25.7% (191/743) and 7.1% (52/733). There were significant differences in positive rates of 4 kinds of viruses in 2013-2016 (P<0.001). A total of 81 EV strains belonging to 8 serotypes were isolated from 1 020 CSF specimens. The positive rates were 4.8% (6 cases), 13.1% (55 cases), 4.1% (7 cases) and 4.2% (13 cases) from 2013 to 2016. Coxsackievirus (CV) B5, echovirus (E) 6 and E30 accounted for 46% (37 isolates), 22% (18 isolates) and 21% (17 isolates) of all strains. Conclusion The AMES cases in Jinan city in 2013-2016 were mainly caused by HSV, EV, MuV, JEV. CVB5, E6 and E30 were the dominant serotypes of EV associated with AMES cases in Jinan city.
8.Etiologic surveillance and analysis of acute meningitis and encephalitis syndrome in Jinan city in 2013-2016
Xiaojuan LIN ; Guifang LIU ; Min WANG ; Zexin TAO ; Suting WANG ; Lizhi SONG ; Li ZHANG ; Aiqiang XU
Chinese Journal of Preventive Medicine 2019;53(2):174-178
Objective To characterize the etiology and epidemiological characteristics of the acute meningitis and encephalitis syndrome (AMES) in Jinan city in 2013-2016. Methods The epidemiological data, clinical diagnosis, serum and cerebrospinal fluid (CSF) specimens were collected from 3 577 AMES cases in 6 sentinel hospitals in Jinan city in 2013-2016. Samples of all cases were made sero?diagnosis for Immunoglobulin (Ig) M antibody to Japanese encephalitis virus (JEV) and negative cases of JEV for enterovirus (EV), mumps virus (MuV) and herpes simplex virus (HSV) by enzyme?linked immunosorbent assay (ELISA). Virus isolation and molecular identification were performed. Positive rates were analyzed by Chi?square test. Results In 2013-2016, the positive rates of JEV, EV, MuV and HSV were 9.0% (322/3 577 cases), 22.1% (643/ 2 916 cases), 9.9% (289/2 916 cases), 26.9% (783/2 916), respectively. Of these, the positive rates of JEV were 32.9% (261/794), 1.2% (14/1 175), 1.0% (8/807) and 4.9% (39/801 cases); EV: 19.5% (91/466), 35.1% (342/974 cases), 15.5% (115/743) and 13.0% (95/733);MuV: 9.2% (43/466), 14.4% (140/974), 9.0% (67/743) and 5.3% (39/733). HSV: 35.4% (165/466), 38.5% (375/974), 25.7% (191/743) and 7.1% (52/733). There were significant differences in positive rates of 4 kinds of viruses in 2013-2016 (P<0.001). A total of 81 EV strains belonging to 8 serotypes were isolated from 1 020 CSF specimens. The positive rates were 4.8% (6 cases), 13.1% (55 cases), 4.1% (7 cases) and 4.2% (13 cases) from 2013 to 2016. Coxsackievirus (CV) B5, echovirus (E) 6 and E30 accounted for 46% (37 isolates), 22% (18 isolates) and 21% (17 isolates) of all strains. Conclusion The AMES cases in Jinan city in 2013-2016 were mainly caused by HSV, EV, MuV, JEV. CVB5, E6 and E30 were the dominant serotypes of EV associated with AMES cases in Jinan city.
9. Etiologic surveillance and analysis of acute meningitis and encephalitis syndrome in Jinan city in 2013-2016
Xiaojuan LIN ; Guifang LIU ; Min WANG ; Zexin TAO ; Suting WANG ; Lizhi SONG ; Li ZHANG ; Aiqiang XU
Chinese Journal of Preventive Medicine 2019;53(2):174-178
Objective:
To characterize the etiology and epidemiological characteristics of the acute meningitis and encephalitis syndrome (AMES) in Jinan city in 2013-2016.
Methods:
The epidemiological data, clinical diagnosis, serum and cerebrospinal fluid (CSF) specimens were collected from 3 577 AMES cases in 6 sentinel hospitals in Jinan city in 2013-2016. Samples of all cases were made sero-diagnosis for Immunoglobulin (Ig) M antibody to Japanese encephalitis virus (JEV) and negative cases of JEV for enterovirus (EV), mumps virus (MuV) and herpes simplex virus (HSV) by enzyme-linked immunosorbent assay (ELISA). Virus isolation and molecular identification were performed. Positive rates were analyzed by Chi-square test.
Results:
In 2013-2016, the positive rates of JEV, EV, MuV and HSV were 9.0% (322/3 577 cases), 22.1% (643/2 916 cases), 9.9% (289/2 916 cases), 26.9% (783/2 916), respectively. Of these, the positive rates of JEV were 32.9% (261/794), 1.2% (14/1 175), 1.0% (8/807) and 4.9% (39/801 cases); EV: 19.5% (91/466), 35.1% (342/974 cases), 15.5% (115/743) and 13.0% (95/733); MuV: 9.2% (43/466), 14.4% (140/974), 9.0% (67/743) and 5.3% (39/733). HSV: 35.4% (165/466), 38.5% (375/974), 25.7% (191/743) and 7.1% (52/733). There were significant differences in positive rates of 4 kinds of viruses in 2013-2016 (
10. Genotypes and molecular characterization of group A rotavirus in domestic sewage in Yantai, 2014-2016
Mingyi XU ; Nan ZHOU ; Xiaojuan LIN ; Suting WANG ; Feng JI ; Aiqiang XU ; Yanyan SONG ; Zexin TAO
Chinese Journal of Experimental and Clinical Virology 2019;33(5):473-477
Objective:
To understand the genotype distribution and molecular epidemiological characteristics of the group A rotavirus (RVA) in domestic sewage, and further explore the importance of environmental surveillance in investigating RVA regional circulation.
Methods:
Sewage samples were collected monthly in the city of Yantai from January 2014 to December 2016. After concentration, total RNA was extracted, and RVA VP7 and VP4 coding regions were amplified via RT-PCR. PCR products were purified, cloned and Sanger sequenced. Genotyping and phylogenetic analysis was conducted based on the sequences.
Results:
Thirty-six sewage samples were collected and 86.1% was positive with VP7 and VP4 sequences. A total of 205 VP7 and 239 VP4 nucleotide sequences were obtained, belonging to 4 G genotypes and 6 P genotypes. Among these, G9 (95.6%, 196/205), P[8] (58.6%, 140/239) and P[4] (28.0%, 67/239) were the most common genotypes. Phylogenetic analysis for G9, P[8] and P[4] sequences revealed co-circulation of multiple transmission chains in local population.
Conclusions
This study describes the genotype distribution and sequence characteristics of local RVA in Shandong province, and the result demonstrate that surveillance on environmental sewage is an effective way in investigating RVA molecular epidemiology.