1.Heterologous expression and enzymatic analysis of Streptomyces griseus trypsin in Streptomyces lividans.
Tengbo MA ; Zhenmin LING ; Zhen KANG ; Jianghua LI ; Guocheng DU ; Jian CHEN
Chinese Journal of Biotechnology 2013;29(4):466-479
Trypsin as an important serine protease has been widely used in food, pharmaceutical and tanning industries. In this study, we successfully expressed trypsin (cloning from Streptomyces griseus ATCC10137) in Streptomyces lividans TK24 and comparatively investigated its enzymatic properties. Specifically, applying S. griseus ATCC 10137 genome as template, we obtained the sprT gene and sub-cloned it into the expression plasmid pIJ86, generating the recombinant strain S. lividans TK24/pIJ86-sprT. When cultivated in R2YE and SELF, the activity of rSGT reached 9.21 U/mL and 8.61 U/mL, respectively. Meanwhile, the results of the enzymatic analysis showed that rSGT exhibited a higher acid tolerance and a higher specificity to hydrolyze amide bonds compared with bovine trypsin (BT). In addition, Zn2+ and organic solvents up-regulated esterase and amidase of rSGT. Taken together, the results obtained herein provide meaningful information for further modification of rSGT and its industrial application.
Fermentation
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Recombinant Proteins
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biosynthesis
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genetics
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Streptomyces griseus
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enzymology
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Streptomyces lividans
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genetics
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metabolism
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Trypsin
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biosynthesis
;
genetics
2.Genome sequencing of Streptomyces aureofaciens DM-1 and analysis of 6-demethylchlortetracycline biosynthesis gene cluster.
Naxin WU ; He HUANG ; Taoling MIN ; Haifeng HU
Chinese Journal of Biotechnology 2020;36(12):2685-2694
Streptomyces aureofaciens DM-1 is a high-yielding 6-demethylchlortetracycline producer. The genome sequencing of DM-1 reveals a linear chromosome containing 6 824 334 bps nucleotides with GC content of 72.6%. In this genome, a total of 6 431 open reading frames were predicted by using glimmer 3.02, Genemark and Z-Curve softwares. Twenty-eight secondary metabolite biosynthetic gene clusters were uncovered by using AntiSMASH gene prediction software, including the complete 6-demethylchlortetracycline biosynthetic gene cluster. A frame-shift mutation in methyltransferase coding region was detected, which may result in the demethylation of chlortetracycline. The complete genome sequence of S. aureofaciens DM-1 provides basic information for functional genomics studies and selection of high-yielding strains for 6-demethylchlortetracycline.
Base Sequence
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Chlortetracycline
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Demeclocycline
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Multigene Family/genetics*
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Streptomyces aureofaciens/genetics*
3.Application of element and metabolism balancing for the cultivation process with Streptomyces aureofaciens.
Jiao-Long FU ; Ying-Ping ZHUANG ; Ming-Zhi HUANG ; Ju CHU ; Si-Liang ZHANG
Chinese Journal of Biotechnology 2003;19(4):471-475
On the base of element and metablism balancing, the mathematical model of the cultivation process with Streptomyces aureofaciens was developed, and the unknown parameters in the model were estimated with the method of nonlinear optimization. Firstly the energetic coefficient of CTC biosynthesis was gained, which was 1.8 - 2.8 mol-ATP x C-mol(-1). The macroscopic reaction rates were predicted in the process and compared with the experimental values. The results show that the model can preferably describe the relationships between several macroscopic reaction rates in the process and can supervise the optimization of CTC fermentation process theoretically.
Chlortetracycline
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metabolism
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Fermentation
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physiology
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Models, Theoretical
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Streptomyces aureofaciens
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growth & development
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metabolism
4.Medium optimization for enhanced production of cytosine-substituted mildiomycin analogue (MIL-C) by Streptoverticillium rimofaciens ZJU 5119.
Dan YE ; Zhi-nan XU ; Pei-lin CEN
Journal of Zhejiang University. Science. B 2008;9(1):77-84
Cytosine-substituted mildiomycin analogue (MIL-C) was produced effectively by supplementing cytosine into the culture of Streptoverticillium rimofaciens. In order to improve the yield of MIL-C, statistically-based experimental designs were applied to optimize the fermentation medium for S. rimofaciens ZJU 5119. Fifteen culture conditions were examined for their significances on MIL-C production using Plackett-Burman design. The Plackett-Burman design and one-variable-at-a-time design indicated that glucose and rice meal as the complex carbon sources, and peanut cake meal and NH4NO3 as the complex nitrogen sources were beneficial for MIL-C production in S. rimofaciens ZJU 5119. The results of further central composition design (CCD) showed that the optimal concentration of glucose, rice meal and peanut cake meal were 18.7 g/L, 64.8 g/L and 65.1 g/L, respectively. By using this optimal fermentation medium, the MIL-C concentration was increased up to 1336.5 mg/L, an approximate 3.8-fold improvement over the previous concentration (350.0 mg/L) with un-optimized medium. This work will be very helpful to the large-scale production of MIL-C in the future.
Anti-Bacterial Agents
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biosynthesis
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Culture Media
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Cytosine
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analogs & derivatives
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biosynthesis
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Fermentation
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Streptomycetaceae
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metabolism
5.Construction of efficient conjugal plasmids between Escherichia coli and Streptomycetes.
Hong-Bo MO ; Lin-Quan BAI ; Sheng-Lan WANG ; Ke-Qian YANG
Chinese Journal of Biotechnology 2004;20(5):662-666
Conjugal plasmid pGH112 has been developed based on the replicons of Streptomyces coelicolor plasmid SCP2 and E. coli ColE. The plasmid contains ampicilin resistance gene(amp) for selection in E. coli and thiostrepton resistance gene (tsr) for selection in Streptomycetes, and a 0.76 kb oriT fragment of (IncP) RK2. Conjugal transfer of pGH112 was performed from E. coli to S. coelicolor A3(2), S. avermitilis, S. lividans TK54, S. toxytricini NNRL15443, S. venezuelae ISP5230 and Sacc. erythraea by conjugation, results show that the plasmid was able to transfer efficenctly from E. coli to Streptomycetes, was stably inherited in the recipients. pGH113 was constructed from pGH112 by combining the constitutive ermE promoter with green fluorescent protein gene(gfp).
Ampicillin Resistance
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genetics
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Conjugation, Genetic
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Escherichia coli
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genetics
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Green Fluorescent Proteins
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genetics
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Plasmids
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Streptomycetaceae
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genetics
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Thiostrepton
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pharmacology
6.Advances in actinobacterial proteomics.
Yao ZHANG ; Ping XU ; Wenjun LI ; Yong TAO
Chinese Journal of Biotechnology 2014;30(7):1044-1058
Protein is the executor of physiological function, and direct embodiment of the life phenomena. Proteomics aims to systematically clarify all or parts of proteins' role and function in life movement. In post genome era, proteomics began to play more important role in life science field. Actinobacteria are closely linked to human production and life, which have produced many clinically important secondary metabolites, including antibiotics, antitumorals and enzymes. Actinobacterial systematics and its model organism Streptomyces coelicolor in 2001 genome sequence laid the foundation for further functional genomic studies. Actinobacterial proteomics was more directly and exactly to interpret the activity of life than genomics and transcriptomics, which grew much faster and received so much attention from scientists in the near years. Complex morphological differention, stronge environment adaptiveness, nitrogen-fixing capacity, metabolic mechanism, pathogenicity and natural produces' discovery were systematically reviewed in this study, which was expected to be the basis for promoting Actinobacterial proteomics study in the near future.
Actinobacteria
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genetics
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metabolism
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Genomics
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Proteomics
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Streptomyces coelicolor
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genetics
;
metabolism
7.Heterologous expression of Streptomyces coelicolor trehalose synthase and whole-cell biocatalyst production of trehalose in Escherichia coli.
Ao WU ; Xian ZHANG ; Meijuan XU ; Taowei YANG ; Huazhong LI ; Zhiming RAO
Chinese Journal of Biotechnology 2019;35(7):1348-1358
The trehalose synthase (ScTreS) gene from Streptomyces coelicolor was successfully cloned and heterologously expressed in Escherichia coli BL21(DE3). The protein purified by Ni-NTA affinity column showed an apparent molecular weight (MW) of 62.3 kDa analyzed by SDS-PAGE. The optimum temperature of the enzyme was 35 °C and the optimum pH was 7.0; the enzyme was sensitive to acidic conditions. By homologous modeling and sequence alignment, the enzyme was modified by site-directed mutagenesis. The relative activities of the mutant enzymes K246A and A165T were 1.43 and 1.39 times that of the wild type, an increased conversion rate of 14% and 10% respectively. To optimize the synthesis conditions of trehalose, the mutant strain K246A was cultivated in a 5-L fermentor and used for whole-cell transformation. The results showed that with the substrate maltose concentration of 300 g/L at 35 °C and pH 7.0, the highest conversion rate reached 71.3%, and the yield of trehalose was 213.93 g/L. However, when maltose concentration was increased to 700 g/L, the yield of trehalose can reach 465.98 g/L with a conversion rate of 66%.
Biocatalysis
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Cloning, Molecular
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Escherichia coli
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Glucosyltransferases
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Streptomyces coelicolor
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Trehalose
8.High expression of mirobial transglutaminase gene from Streptoverticillium mobaraense in Escherichia coli.
Bin XU ; Zhi-Bo HAN ; Ping YANG ; Yong-Jun LIU ; Yan-Han LI ; Zhong-Chao HAN
Chinese Journal of Biotechnology 2005;21(5):794-798
The microbial transglutamunase (MTG) gene was amplified from the genomic DNA of Streptoverticillium mobaraensea by using PCR and inserted into pET vector to construct the expression plasmid called pET-MTG. The pET-MTG was transfected into E. coli (Rosetta DE3) and the MTG protein was found to be highly expressed as inclusion bodies. The inclusion bodies were isolated and subjected to denaturation and re-naturation, followed by strong cation ion-exchange chromatography to purify the expressed MTG. The specific activity of purified MTG was close to that of native MTG. Taken together, this study might provide a base for the industrial production of microbial transglutaminase.
Bacterial Proteins
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genetics
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metabolism
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Escherichia coli
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genetics
;
metabolism
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Genes, Bacterial
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Inclusion Bodies
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enzymology
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Recombinant Proteins
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genetics
;
metabolism
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Streptomycetaceae
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enzymology
;
genetics
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Transglutaminases
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genetics
;
metabolism
9.Expression of 4"-O-isovaleryltransferase gene from Streptomyces thermotolerans in Streptomyces lividans TK24.
Jiahu ZHANG ; Jingjing ZHONG ; Jianlu DAI ; Yiguang WANG ; Huanzhang XIA ; Weiqing HE
Chinese Journal of Biotechnology 2014;30(9):1390-1400
4"-O-isovaleryltransferase gene (ist) was regulated by positive regulatory genes of midecamycin 4"-O-propionyltransferase gene (mpt) in Streptomyces lividans TK24. A BamH I ~8.0 kb fragment from Streptomyces mycarofaciens 1748 was proved that it contained mpt gene and linked with two positive regulatory genes, orf27 and orf28. Orf of mpt was replaced by orf of ist and linked with two regulatory genes or orf27 single, and individually cloned into the vectors pKC1139 or pWHM3 (high copy number), and then transformed into S. lividans TK24. The levels of mpt and ist expression were evaluated by the bio-tramsformation efficacy of spiramycin into 4"-O-acylspiramycins in these transformants. The results showed that 4"-O-isovalerylspiramycins could be detected only in the transformants containing the plasmids constructed with pWHM3. The efficacy of bio-transformation of the transformants containing two regulatory genes was higher than that of orf27 single. So, the positive regulatory genes system of mpt gene could enhance ist gene expression.
Acyltransferases
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genetics
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metabolism
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Bacterial Proteins
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genetics
;
metabolism
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Gene Expression
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Genetic Vectors
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Plasmids
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Spiramycin
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analogs & derivatives
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biosynthesis
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Streptomyces
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enzymology
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genetics
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Streptomyces lividans
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metabolism
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Transformation, Genetic
10.Activation of silent antibiotic synthesis in Streptomyces lividans by disruption of a negative regulator nsdA, a gene conserved in Streptomyces.
Zhen YU ; Qian WANG ; Zi-Xin DENG ; Mei-Feng TAO
Chinese Journal of Biotechnology 2006;22(5):757-762
The global regulatory gene, nsdA, negatively regulates antibiotics production in Streptomyces coelicolor. Southern blot experiment, using an nsdA fragment of S. coelicolor as probe, indicated that nsdA gene existed in many Streptomyces. Primers were designed based on the published sequences of S. coelicolor and S. avermitilis. PCR amplification and sequencing showed that nsdA in Streptomyces was conservative and that of S. lividans ZX64 has a 100% identity in the nucleotide sequence comparing with that of S. coelicolor A3 (2). The nsdA disrupted mutant of S. lividans was constructed named as WQ2. WQ2 was able to produce actinorhodin but the wild-type strain ZX64 did not, which has a silent gene cluster contributing to the biosynthesis of actinorhodin. However, the ability was lost when another copy of the wild nsdA gene was introduced into WQ2. All the results above indicate that nsdA homologous gene is wildly existent and conserved in Streptomyces. And it plays a role in negatively regulating the actinorhodin synthesis in S. lividans and disruption of it can activate the silent gene cluster.
Anti-Bacterial Agents
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biosynthesis
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Blotting, Southern
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Genes, Bacterial
;
physiology
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Genes, Regulator
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physiology
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Multigene Family
;
Streptomyces lividans
;
genetics