1.Difference in the Transcriptional Activity of the Interleukin-4 Promoter Haplotypes.
Eun Hwa CHOI ; Hee Sup KIM ; Stephen J CHANOCK ; Hoan Jong LEE
Korean Journal of Pediatrics 2005;48(5):495-499
PURPOSE: Interleukin-4(IL-4) is a critical component of the Th2 cytokine pathway and contributes to severity of respiratory syncytial virus(RSV) bronchiolitis. Previous studies observed an association between severe RSV bronchiolitis in Korean children with a common haplotype of the IL4 promoter. This study was performed to investigate functional differences of the variant IL4 promoter haplotypes. METHODS: Genomic DNA was obtained from 20 children from 6 to 48 months of age in the Department of Pediatrics, Seoul National University Bundang Hospital. The IL4 promoter spanning an 1.2 kb region was amplified and haplotype was determined by cloning and the PHASE reconstruction. Transcriptional activity of Jurkat T cells which were transfected with each IL4 haplotype were analyzed by use of luciferase assay. RESULTS: Three haplotypes of the IL4 promoter have been identified with the frequency of GCC(7 percent), TCC(17 percent), and TTT(76 percent). The TTT haplotype demonstrated the highest luciferase values in both unstimulated and PMA-stimulated Jurkat T cells. Increases in transcriptional activity compared to GCC have been shown in TTT(5.3 fold higher) followed by TCC(4.2 fold higher) in unstimulated Jurkat T cells. CONCLUSION: We provided evidence that increased transcriptional activity of the TTT haplotype of the IL4 promoter, which has previously been over-represented in Korean children with severe RSV bronchiolitis. Therefore, IL-4 could play a potential role in the pathogenesis of RSV infection, possibly via an altered transcriptional activity of the different IL4 haplotypes.
Bronchiolitis
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Child
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Clone Cells
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Cloning, Organism
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DNA
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Haplotypes*
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Humans
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Interleukin-4*
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Luciferases
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Pediatrics
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Respiratory Syncytial Viruses
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Seoul
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T-Lymphocytes
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Transcriptional Activation
2.Polymorphisms in genes involved in innate immunity and susceptibility to benzene-induced hematotoxicity.
Min SHEN ; Luoping ZHANG ; Kyoung Mu LEE ; Roel VERMEULEN ; H Dean HOSGOOD ; Guilan LI ; Songnian YIN ; Nathaniel ROTHMAN ; Stephen CHANOCK ; Martyn T SMITH ; Qing LAN
Experimental & Molecular Medicine 2011;43(6):374-378
Benzene, a recognized hematotoxicant and carcinogen, can damage the human immune system. We studied the association between single nucleotide polymorphisms (SNPs) in genes involved in innate immunity and benzene hematotoxicity in a cross-sectional study of workers exposed to benzene (250 workers and 140 controls). A total of 1,236 tag SNPs in 149 gene regions of six pathways were included in the analysis. Six gene regions were significant for their association with white blood cell (WBC) counts (MBP, VCAM1, ALOX5, MPO, RAC2, and CRP) based on gene-region (P < 0.05) and SNP analyses (FDR < 0.05). VCAM1 rs3176867, ALOX5 rs7099684, and MPO rs2071409 were the three most significant SNPs. They showed similar effects on WBC subtypes, especially granulocytes, lymphocytes, and monocytes. A 3-SNP block in ALOXE3 (rs7215658, rs9892383, and rs3027208) showed a global association (omnibus P = 0.0008) with WBCs even though the three SNPs were not significant individually. Our study suggests that polymorphisms in innate immunity genes may play a role in benzene-induced hematotoxicity; however, independent replication is necessary.
Adult
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Arachidonate 5-Lipoxygenase/genetics/*metabolism
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Benzene/toxicity
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Cell Count
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Cross-Sectional Studies
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Female
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Genetic Association Studies
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Genetic Predisposition to Disease
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Hematologic Diseases/chemically induced/genetics/*metabolism/pathology
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Humans
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Immunity, Innate/genetics
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Leukocytes/*drug effects/metabolism/pathology
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Male
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Occupational Exposure/adverse effects
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Peroxidase/genetics/*metabolism
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Polymorphism, Single Nucleotide
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Vascular Cell Adhesion Molecule-1/genetics/*metabolism