1.Development of an LB cloning system and its application in expression of fusion genes in Sphingomonas sp. WG.
Han XUE ; Hui LI ; Mengqi CHEN ; Zaimei ZHANG ; Zhongrui GUO ; Hu ZHU ; Jiqian WANG ; Yawei SUN
Chinese Journal of Biotechnology 2022;38(4):1576-1588
In order to overcome the challenges of insufficient restriction enzyme sites, and construct a fusion-expression vector with flexible fusion direction, we designed an LB cloning system based on the type IIS and type IIT restriction enzymes LguⅠ and BbvCⅠ. The LB cloning system is constructed by inserting the LB fragment (GCTCTTCCTCAGC) into the multiple cloning site region of the broad-host plasmid pBBR1MCS-3 using PCR. The LB fragment contains partially overlapped recognition sites of LguⅠ and BbvCⅠ. Therefore, the same non-palindromic sequence will be generated by these two restriction endonucleases digestion. This feature can be used to quickly and flexibly insert multiple genes into the expression vector in a stepwise and directed way. In order to verify the efficacy of the cloning system, two glycosyltransferase genes welB and welK of Sphingomonas sp. WG were consecutively fused to the LB cloning vector, and the recombinant plasmid was transferred into Sphingomonas sp. WG by triparental mating. The results showed that gene fusion expression has little effect on sphingan titer, but enhanced the viscosity of sphingan. The viscosity of the sphingan produced by recombinant strain Sphingomonas sp. WG/pBBR1MCS-3-LB-welKB was 24.7% higher than that of the wild strain after fermentation for 84 h, which would be beneficial for its application. In conclusion, the application of LB cloning system were verified using Sphingomonas sp. WG. The LB cloning system may provide an efficient tool for fusion expression of target genes.
Base Sequence
;
Cloning, Molecular
;
Fermentation
;
Plasmids/genetics*
;
Sphingomonas/metabolism*
2.Analysis of both chitinase and chitosanase produced by Sphingomonas sp. CJ-5.
Xu-Fen ZHU ; Ying ZHOU ; Jun-Li FENG
Journal of Zhejiang University. Science. B 2007;8(11):831-838
A novel chitinolytic and chitosanolytic bacterium, Sphingomonas sp. CJ-5, has been isolated and characterized. It secretes both chitinase and chitosanase into surrounding medium in response to chitin or chitosan induction. To characterize the enzymes, both chitinase and chitosanase were purified by ammonium sulfate precipitation, Sephadex G-200 gel filtration and DEAE-Sepharose Fast Flow. SDS-PAGE analysis demonstrated molecular masses of chitinase and chitosanase were 230 kDa and 45 kDa respectively. The optimum hydrolysis conditions for chitinase were about pH 7.0 and 36 degrees C, and these for chitosanase were pH 6.5 and 56 degrees C, respectively. Both enzymes were quite stable up to 45 degrees C for one hour at pH 5~8. These results show that CJ-5 may have potential for industrial application particularly in recycling of chitin wastes.
Chitinases
;
metabolism
;
Enzyme Stability
;
Fermentation
;
Glycoside Hydrolases
;
metabolism
;
Hydrogen-Ion Concentration
;
Sphingomonas
;
enzymology
3.Microbial biosynthesis and biotransformation of indigo and indigo-like pigments.
Xiaohong HAN ; Wei WANG ; Xingguo XIAO
Chinese Journal of Biotechnology 2008;24(6):921-926
Indigo and indigo-like pigments are widely used in the industry of textile, food and medicine. Now people pays more and more attention to developing an alternative method of indigo production which is "environment-friendy", especially microbial biosynthesis of indigo. Many microorganisms involved in the biosynthesis of indigo have been isolated and characterized, and monooxygenase and dioxygenase have been identified to catalyze indigo biosynthesis. Some genes encoding for these enzymes have been cloned and used to construct "engineering bacteria". With this kind of bacteria, more efficient fermentation systems for indigo production have been exploited. In the meantime, biotransformation of the indigo produced by microorganisms has been under investigation. These progresses will bring us a greener method of indigo and indigo-like pigments production.
Biotechnology
;
Coloring Agents
;
metabolism
;
Dioxygenases
;
metabolism
;
Fermentation
;
Indigo Carmine
;
Indoles
;
metabolism
;
Mixed Function Oxygenases
;
metabolism
;
Pseudomonas
;
metabolism
;
Sphingomonas
;
metabolism
4.Construction of multifunctional genetically engineered pesticides-degrading bacteria by homologous recombination.
Jian-Dong JIANG ; Li-Feng GU ; Ji-Quan SUN ; Xian-Zhu DAI ; Yang WEN ; Shun-Peng LI
Chinese Journal of Biotechnology 2005;21(6):884-891
Construction of multifunctional pesticides-degrading genetically engineered microorganisms (GEMs) is increasing important in the bioremediation of various pesticides contaminants in environment. However, construction of genetically stable GEMs without any exogenous antibiotic resistance is thought to be one of the bottlenecks in GEMs construction. In this article, homologous recombination vectors with the recipient's 16S rDNA as homologous recombination directing sequence (HRDS) and sacB gene as double crossover recombinants positive selective marker were firstly constructed. The methyl parathion hydroalse gene (mpd) was inserted into the 16S rDNA site of the carbofuran degrading strain Sphingomonas sp. CDS-1 by homologous recombination single crossover in the level of about 3.7 x 10-(7) - 6.8 x 10(-7). Multifunctional pesticides-degrading GEMs with one or two mpd genes inserted into the chromosome without any antibiotic marker were successfully constructed. The homologous recombination events were confirmed by PCR and southern blot methods. The obtained GEMs were genetically stable and could degrade methyl parathion and carbofuran simultaneously. The insertion of mpd gene into rrn site did not have any significant effect on recipient' s physiological and original degrading characteristics. The methyl parathion hydrolase (MPH) was expressed at a relatively high level in the recombinants and the recombinant MPH specific activity in cell lysate was higher than that of original bacterium (DLL-1) in every growth phase tested. The highest recombinant MPH specific activity was 6.22 mu/tg. In this article, we describe a first attempt to use rRNA-encoding regions of Sphingomonas strains as target site for expression of exogenous MPH, and constructed multifunctional pesticides degrading GEMs, which are genetically stable and promising for developing bioremediation strategies for the decontamination of pesticides polluted soils.
Biodegradation, Environmental
;
Carbofuran
;
metabolism
;
Environmental Pollutants
;
metabolism
;
Genetic Markers
;
Insecticides
;
metabolism
;
Organisms, Genetically Modified
;
genetics
;
metabolism
;
Phosphoric Monoester Hydrolases
;
genetics
;
metabolism
;
RNA, Ribosomal, 16S
;
genetics
;
Recombination, Genetic
;
Sphingomonas
;
genetics
;
metabolism