1.Identification of soybean GolS gene family and analysis of expression patterns under salt and drought stresses.
Dan LIU ; Keai WANG ; Peng NI ; Qiuyan WANG ; Kang ZHU ; Wenliang WEI
Chinese Journal of Biotechnology 2022;38(10):3757-3772
Galactinol synthase (GolS) is a key enzyme in the biosynthetic pathway of raffinose family oligosaccharides (RFOs) and plays an important role in plant responses to abiotic stresses. However, the molecular characteristics of the GolS family members in soybean was not well-known. In this study, six members of GmGolS gene family were genome-widely identified, and their physicochemical properties, chromosomal localization, evolutionary relationship, gene structure, conserved motifs, secondary structure, tertiary structure, tissue-specific expression patterns and the expression levels under salt and drought stresses were analyzed. The results showed that six soybean GolS genes were unevenly distributed on four chromosomes, the range of the isoelectric points of six GmGolS proteins was 5.45-6.08, the molecular weight range was 37 567.07-38 817.59 Da, and the number of amino acids was 324-339 aa. The results of subcellular localization showed that 4 proteins were located in the chloroplast, and 2 proteins in the cytoplasm. Phylogenetic tree analysis showed that the members of the soybean GolS gene family were closely adjacent to each other, and were evolutionarily conservative. Six gene members contain 3 or 4 exons. Prediction of secondary and tertiary structures showed that the spatial structure of proteins of all family members was mainly composed of α-helix and random coil structure, with less β-turn and extended chain structure. Tissue-specific expression analysis showed that six GmGolS members expressed to variable degrees in seeds, roots, root hairs, flowers, stems, pods, nodules and leaves. Expression analysis based on qRT-PCR showed that all GmGolS genes showed different degrees of up-regulated expression under salt and drought treatment, indicating that these genes may be related to the response of plants to salt-tolerance and drought-resistance. These results may facilitate subsequent functional analysis of soybean GolS genes.
Droughts
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Soybeans/genetics*
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Phylogeny
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Plant Proteins/metabolism*
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Stress, Physiological/genetics*
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Plants/metabolism*
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Gene Expression Regulation, Plant
2.Effects of Soybean Metabolites on Prostate Cancer.
Wun Jae KIM ; Seung Chan LEE ; Hoon JANG ; Jae Mann SONG ; Jin Han YOON ; Sang Eun LEE ; Jung Sik RIM ; Sung Joon HONG
Korean Journal of Urology 2003;44(11):1093-1097
PURPOSE: It has been postulated that soybean isoflavones act as inhibitory factors in several cancers. Recently, various in vitro and in vivo experimental studies have demonstrated that these isoflavones inhibit prostate cancer. Therefore, we investigated whether soybean isoflavones influenced the development of prostate cancer by comparing the levels of circulating isoflavones between prostate cancer patients and controls. MATERIALS AND METHODS: The serum levels of genistein, daidzein and equol were determined using reverse-phase, high-performance liquid chromatography-multiple reaction ion monitoring mass spectrometry(HPLC-MS) and compared in 122 experimental subjects(61 prostate cancer patients and 61 cancer-free controls) from 6 hospitals. RESULTS: The serum concentrations of genistein, daidzein and equol in the patients were 130.7+/-181.4ng/ml, 53.6+/-69.3ng/ml and 11.37+/-43.4ng/ml, with control values of 95.6+/-95.2ng/ml, 55.2+/-121.8ng/ml and 23.2+/-34.5ng/ml, respectively. There was no statistical difference between the 2 groups. Daidzein non-metabolizers who were unable to degrade daidzein into equol were compared between the patients and the controls, and were found to be significantly more common in the patient group (p=0.001, OR=3.44, 95% CI=1.6243-7.2855). However, the equol/daidzein ratio was significantly lower in the patients than in the controls(p=0.0072). No association between age, stage, Gleason score or isoflavone concentrations was found. CONCLUSIONS: These results suggest that the capability to produce equol (i.e., the mechanism for the metabolism of daidzein into equol) is closely involved in the lower incidence of prostate cancer, and that a diet based on soybean isoflavones would be useful in preventing prostate cancer.
Diet
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Equol
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Genistein
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Humans
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Incidence
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Isoflavones
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Metabolism
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Neoplasm Grading
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Prostate*
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Prostatic Neoplasms*
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Soybeans*
3.Study on the repeated batch fermentation of lipase by immobilized Rhizopus.
Chinese Journal of Biotechnology 2004;20(2):284-286
Repeated batch fermentation with Rhizopus arrhizus immobilized by polyurethane was optimized in details including the time to replace, the volume of the replaced medium and the optimal composition of the medium to replace. Immobilized cells showed stability for repeated use. Immobilized cells could be used for 9 batches, lasting 140h in flask and 6 batches in 5L fermenter when the substitute culture medium consisted of (%): soybean flour 3.0, earthnut oil 0.5 and the liquid was replaced by 40% . The time for fermentation was reduced largely and the lipase productivity was 3 - 6 times as high as that in batch fermentation.
Biotechnology
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methods
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Cells, Immobilized
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metabolism
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Fermentation
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Lipase
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biosynthesis
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Plant Oils
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Rhizopus
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enzymology
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Soybeans
4.Interactions of cadmium and aluminum toxicity in their effect on growth and physiological parameters in soybean.
Imran Haider SHAMSI ; Kang WEI ; Ghulam JILANI ; Guo-ping ZHANG
Journal of Zhejiang University. Science. B 2007;8(3):181-188
The effect of Al and Cd on the growth, photosynthesis, and accumulation of Al, Cd and plant nutrients in two soybean genotypes were determined using hydroponic culture. There were six treatments: pH 6.5; pH 4.0; pH 6.5+1.0 micromol/L Cd; pH 4.0+1.0 micromol/L Cd; pH 4.0+150 micromol/L Al; pH 4.0+1.0 micromol/L Cd+150 micromol/L Al. The low pH (4.0) and Al treatments caused marked reduction in root length, shoot height, dry weight, chlorophyll content (SPAD value) and photosynthetic rate. Al-sensitive cv. Zhechun 2 accumulated comparatively more Al and Cd in plants than Al-tolerant cv. Liao 1. Compared with pH 6.5, pH 4.0 resulted in significant increase in Cd and Al concentration in plants. Combined application of Cd and Al enhanced their accumulation in roots, but caused a reduction in shoots. The concentrations of all 10 nutrients (P, K, Ca, Mg, Fe, Mn, Cu, Zn and B), except Mo were also increased when plants were exposed to pH lower than pH 6.5. Al addition caused a reduction in the concentration of most nutrients in plant roots and shoots; but K, Mn and Zn in roots were increased. Treatments with Cd alone or together with Al reduced the concentrations of all the plant nutrients in plants. Al-sensitive genotype Zhechun 2 has lower nutrient concentration than Al-tolerant genotype Liao 1. The current findings imply that Al and Cd are synergistic in their effect on plant growth, physiological traits and nutrient uptake.
Aluminum
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toxicity
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Cadmium
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toxicity
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Hydrogen-Ion Concentration
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Photosynthesis
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drug effects
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Soybeans
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drug effects
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growth & development
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metabolism
5.Types of Special Infant Formulas Marketed in Korea and Their Indications.
Pediatric Gastroenterology, Hepatology & Nutrition 2018;21(3):155-162
Infant formula is classified into standard cow's milk-based and special formulas. This review aimed at summarizing the types of special milk formulas currently sold in Korea, and the appropriate indications for the use of these formulas; lactose free formula, soy-based formula, protein hydrolysate formula, amino acid-based formula, preterm formula, medium chain triglyceride formula, low-phosphorus formula, protein-energy-enriched formula, and formulas for inborn errors of metabolism.
Humans
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Infant Formula*
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Infant*
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Korea*
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Lactose
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Metabolism, Inborn Errors
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Milk
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Protein Hydrolysates
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Soybeans
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Triglycerides
6.Effects of soy isoflavone on the reproductive system development and ER-beta expression in male rat offspring in different postnatal periods.
Xiao-Man DAI ; Xiao-Hu GUO ; Xiu-Feng AN ; He-Ru LIU ; Bo ZHANG
National Journal of Andrology 2012;18(10):915-919
OBJECTIVETo investigate the effects of pre- and post-natal exposure to soy isoflavones (SIF) on the related indicators of the reproductive system development and ER-beta expression in male rat offspring.
METHODSPregnant SD rats were randomly divided into a corn oil group (control), 3 SIF groups (50, 200 and 400 mg/kg body weight), and a diethylstilbestrol (DES, 0.1 mg/ kg body weight) group to be treated respectively by intragastric gavage from pregnancy day 0. On postnatal day (PND) 21, the male offspring were treated in the same manner till sexual maturity, and on PND 49 and 90, 6 male rats from each group were killed for observation of the related indicators of the reproductive system development and the detection of the expression of ER-beta in the testis.
RESULTSThe mean daily food intake showed no evident differences among the SIF and DES groups, but the food efficiency ratio (FER) was significantly decreased in the 200 and 400 mg/kg SIF and 0.1 mg/kg DES groups (P < 0.05) at 49 and 90 PND. At the dose of > or = 50 mg/kg, SIF markedly reduced the body weight of the rats (P < 0.05), even more so at 90 PND than at 49 PND. The increased dose of SIF was correlated with the reduction of testis weight, sperm head count and daily sperm production, and so was it with the elevation of the ER-beta expression, both more obviously at 90 PND than at 49 PND.
CONCLUSIONPre- and post-natal exposure to SIF affects the reproductive system development of male rat offspring, and the elevation of ER-beta expression may be one of its mechanisms.
Animals ; Estrogen Receptor beta ; metabolism ; Female ; Isoflavones ; pharmacology ; Male ; Maternal Exposure ; Pregnancy ; Rats ; Reproduction ; drug effects ; Soybeans ; chemistry ; Testis ; metabolism
7.The protective effects of soybean isoflavone against hepatic ischemia-reperfusion injury in rat.
Chinese Journal of Hepatology 2010;18(5):383-384
Animals
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Isoflavones
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pharmacology
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Liver
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metabolism
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pathology
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Liver Diseases
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metabolism
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pathology
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Rats
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Rats, Wistar
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Reperfusion Injury
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pathology
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prevention & control
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Soybeans
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chemistry
8.Study on preparation of salvianolic acid phospholipid compound.
Xiao-Yun CHEN ; Zhen-Hai ZHANG ; Dan LIU ; Dan-Hong YU ; E SUN ; Xiao-Bin JIA
China Journal of Chinese Materia Medica 2014;39(2):216-221
To prepare salvianolic acid phospholipid compound. With the compound of salvianolic acids and soybean phospholipid as the index, mono-factor experiment and orthogonal design experiment were conducted to screen its technical parameters. According to the results, the optimal preparation conditions of salvianolic acid phospholipid compound were that THF were taken as the reaction solvent, the concentration time was 3 h, the reactant concentration was 5 g x L(-1), the mass ratio of salvianolic acids and phospholipid was 1: 1.5, and the reaction temperature was 40 degrees C. The oil/water partition coefficient of the prepared salvianolic acid phospholipid compound significant increased in water and buffers with different pH values. The results of phase analysis such as DSC, XRD and FTIR indicated that salvianolic acids existed in phospholipid in an amorphous state.
Alkenes
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chemistry
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metabolism
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Chemical Phenomena
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Chemistry, Pharmaceutical
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methods
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Intestinal Absorption
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Phospholipids
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chemistry
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Polyphenols
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chemistry
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metabolism
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Soybeans
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chemistry
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Temperature
9.Lipoxygenase-mediated N-demethylation of pesticides in vitro.
Chinese Journal of Industrial Hygiene and Occupational Diseases 2002;20(6):409-412
OBJECTIVEIn order to explore the pathway of dealkylation of pesticides other than cytochrome P450 monocoxygenases, lipoxygenase (LOX)-mediated demethylation of aminocarb and some other pesticides were measured.
METHODFormaldehyde generated in the reaction was estimated by Nash reaction to express the rate of demethylation of pesticides mediated by soy lipoxygenase (SLO).
RESULTSN-demethylation of aminocarb mediated by SLO was found to depend on the incubation time, concentration of the enzyme, concentration of aminocarb and hydrogen peroxide. Under optimal conditions, Vmax value of 18 nmol of formaldehyde.min-1.nmol-1 of lipoxygenase was observed. The reaction exhibited Km values of 3.4 mmol/L for aminocarb and 235 mumol/L for hydrogen peroxide. A strong inhibition of the reaction by nordihydroguaiaretic acid, gossypol, and phenidone clearly implicated the lipoxygenase involvement as the protein catalyst. A significant decline in the formaldehyde accumulation in the presence of either reduced glutathione or dithiothreitol suggested generation of a free radical species as an initial oxidation intermediate during the demethylation of aminocarb by SLO. The inhibition of formaldehyde generation by butylated hydroxyanisole(BHT) and butylated hydroxy toluene(BHA) further supported this contention. In addition to aminocarb, seven other pesticides were also found to undergo N-demethylation, albeit at relatively low rates.
CONCLUSIONCertain pesticides may oxidatively undergo dealkylation via the lipoxygenase pathway in animals and plants.
Butylated Hydroxyanisole ; pharmacology ; Butylated Hydroxytoluene ; pharmacology ; Dealkylation ; Free Radicals ; Lipoxygenase ; physiology ; Pesticides ; metabolism ; Phenylcarbamates ; metabolism ; Soybeans ; enzymology
10.Screening and identification of GABA-producing microbes in fermentation process of Sojae Semen Praeparatum.
Jing-Jing XIONG ; Jia-Xiu REN ; Shu-Han ZHOU ; Ming-Sheng SU ; Li-Yuan WANG ; Mei-Zhi WENG ; Wei-Hua XIE ; Xiao-Mei XIE
China Journal of Chinese Materia Medica 2019;44(11):2266-2273
A high-content GABA was found in Sojae Semen Praeparatum(SSP), which is a famous traditional Chinese medicine and officially listed in Chinese Pharmacopoeia. To screen out and identify GABA-producing microbes from samples at different time points during the fermenting process of SSP, traditional microbiological methods combined with molecular biological methods were used to study the predominant GABA-producing microorganisms existing in the fermenting process of SSP. This study would lay a foundation for further studying the processing mechanism of SSP. The fermenting process of SSP was based on Chinese Pharmacopoeia(2010 edition), and samples were taken at different time points during the fermenting process of SSP. The bacteria and fungi from samples at different time points in the fermenting process of SSP were cultured, isolated and purified by selective medium, and dominant strains were selected. The dominant bacteria were cultured in the designated liquid medium to prepare the fermentation broths, and GABA in the fermentation broth was qualitatively screened out by thin-layer chromatography. The microbial fermentation broth with GABA spots in the primary screening was quantitatively detected by online pre-column derivatization and high performance liquid chromatography established in our laboratory. GABA-producing microorganisms were screened out from predominant strains, and their GABA contents in fermentation broth were determined. The DNA sequences of GABA-producing bacteria and fungi were amplified using 16S rDNA and 18S rDNA sequences by PCR respectively. The amplified products were sequenced, and the sequencing results were identified through NCBI homology comparison. Molecular biological identification was made by phylogenetic tree constructed by MEGA 7.0 software. Through the homology comparison of NCBI and the construction of phylogenetic tree by MEGA 7.0 software, nine GABA-producing microorganisms were screened out and identified in this study. They were Bacillus subtilis, Enterococcus faecium, E. avium, Aspergillus tamarii, A. flavus, A. niger, Cladosporium tenuissimum, Penicillium citrinum and Phanerochaete sordida respectively. For the first time, nine GABA-producing microorganisms were screened out and identified in the samples at different time points during the fermenting process of SSP in this study. The results indicated that multiple predominant GABA-producing microorganisms exist in the fermenting process of SSP and may play an important role in the formation of GABA.
Bacteria
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classification
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metabolism
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Chromatography, High Pressure Liquid
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Fermentation
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Fungi
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classification
;
metabolism
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Phylogeny
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Seeds
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microbiology
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Soybeans
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microbiology
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gamma-Aminobutyric Acid
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biosynthesis