1.Prevalence of pathogens in the hospitalized patients with community-acquired pneumonia in HebeiProvince
Suyin LI ; Xixin YAN ; Haibo XU ; Shunxiang QI
Chinese Journal of General Practitioners 2012;11(1):54-56
An investigation on pathogens was performed on 219 consecutive adult inpatients with community-acquired pneumonia (CAP) from November 2008 to August 2009 in Hebei Province.Sputum samples from all patients in acute phase were collected for multiplex polymerase chain reaction (PCR) detection. Pathogens were identified in 125 patients. Streptococcus pneumoniae was the most common pathogen isolated in 75 cases (60%) ; influenza A virus was the most common virus isolated in 32 cases (26%) ; and mixed infection were found in 31 patients (25%). Streptococcus pneumoniae species were more frequent among patients aged ≤30 and 51 -70; Haemophilus influenzae species were more frequent among patients with coexisting disease; the percent of Mycoplasma pneumoniae species infections in the lowrisk groups( Ⅰ - Ⅱ ) was higher than patients in the high-risk groups ( Ⅲ - V ).The percent of virus pneumoniae species infections in patients with coexisting disease trended to higher than patients without coexisting disease,but the difference was not statistically significant ( P > 0.05 ).The results indicate that Streptococcus pneumoniae remains the major bacteria,Viruses are frequently detected in CAP with influenza A virus being the most common one; and mixed infection should not be ignored.The age and underlying diseases are important factors influencing the distribution of pathogens.
2.Virological surveillance and variability of influenza viruses in Hebei,2005~2006
Yanfang LIU ; Shunxiang QI ; Ruiling GUO ; Lanfen LIU ; Guangyue HAN
Chinese Journal of Disease Control & Prevention 2008;0(04):-
N)compared with B/HongKong/330/2001.Conclusions H1,H3 and B virus were circulated in Hebei from 2005 to 2006.Recent viruses were changing in genetic characteristics,while influenza B viruses varied more obviously.
3.Evolutionary characterization of HA1 gene of influenza A H3N2 viruses from 2003 to 2008 in Hebei
Shunxiang QI ; Yanfang LIU ; Guangyue HAN ; Lanfen LIU ; Wei GAO
Chinese Journal of Disease Control & Prevention 2008;0(04):-
Objective To understand the genetic characterization of HA1 gene of influenza A H3N2 viruses circulated in recent years in Hebei.Methods Viral RNAs of 25 H3N2 strains were extracted and amplified by Reverse Transcription Polymerase Chain Reaction (RT-PCR).The products of PCR were purified and sequenced,and the sequences were analyzed though biometic software.Results Several amino acid substitutions located in antigenic sites or receptor binding sites were found more in the isolates than the current vaccine virus or the isolates from previous year.Amino acid substitution was found in 3,140,142,144,145,158,159,189,192,193,198,204,225,226 and 227 positions in the isolates during 2003-2008,more amino acid substitutions took place in antigenic determinant A,B and receptor binding site (RBS).New phylogenetic branches appeared continuously during 2003-2008.The H3N2 strains of the same year almost clustered in the same group on the phylogenetic tree.Conclusions Amino acid substitutions continuously occurred in the HA1 genes in influenza A H3N2 viruses isolated in Hebei from 2003 to 2008,it is meaningful to pay close attention to the HA1 variation in order to prevent and control influenza.
4.Viral etiology of acute upper respiratory infection in Hebei Province from 2013 to 2015
Guangyue HAN ; Yan LI ; Yanfang LIU ; Lanfen LIU ; Caixiao JIANG ; Qi LI ; Shunxiang QI
Chinese Journal of Disease Control & Prevention 2017;21(9):891-894
Objective To investigate the viral etiology and the epidemilogy of acute upper respiratory tract infection in Hebei Province from 2013 to 2015,providing scientific basis for diagnosis,prevention and control of the respiratory tract infection.Methods l 551 throat swab samples of the acute upper respiratory infection patients from four hospitals in Hebei Province were collected,Multiplex real-time PCR was used to detect 15 kinds of respiratory tract viruses for all specimens after nucleic acids extraction.Results Totally 714 positive samples were obtained from 1 551 samples,with a positive rate of 46.03%.Human rhinovirus(186,11.99%)was detected as the most common viral species,followed by human parainfluenza 3(167,10.77%),respiratory syncytial virus (122,7.87%),adenovirus (108,6.96%),influenza B virus (56,3.61%),human metapneumovirus(40,2.58%),influenza A virus(39,2.51%),human boca virus (38,2.45%),human parainfluenza 1 (35,2.26%),human coronavirus-229E/NL63 (33,2.13%),human enterovirus (32,2.06%),human parainfluenza 4(31,2.00%),human coronavirus-OC43 (30,1.93%),and human parainfluenza 2(11,0.71%).176 cases (11.35%) were detected as co-infection.The infection rate(56.07%) of under 5 years old group was higher than that of other groups.Conclusions The predominant respiratory viruses,who are responsible for acute upper respiratory tract infections in Hebei Province,are HRV,PIV3,RSV,ADV and IFV.Each virus possess the specific epidemiological feature.
5.Establishment and application of fluorescent antibody virus neutralization test for Hantavirus
Qi LI ; Yamei WEI ; Xu HAN ; Zhanying HAN ; Yanbo ZHANG ; Yonggang XU ; Shunxiang QI
Chinese Journal of Experimental and Clinical Virology 2016;30(3):324-327
Objective To establish a fluorescent antibody virus neutralization (FAVN) test for hantavirus (HV).Methods With the method of dilution serum and fixed virus,the serum samples were diluted with different concentration,and with virus-liquid were mixed in 96 culture plate hole,37 ℃ for 1 hour.Then the mixture of serum and virus was added to Veto-E6 cells which had grown into a monolayer,and cultivated in the 37 ℃,5% CO2 incubator for 7 days; the 96-well plate was fixed and stained.The results were observed under a fluorescence microscope.The neutralization titer was calculated according to the formula.Results The suitable cell concentrations is 4 × 104 ~ 4.5 × 104/hole,and the proper temperature for neutralize is 37 ℃.30 serum specimens of HFRS were tested by FAVN and PRNT,the FAVN is more sensitive and stable.Conclusion FAVN is easier,faster and more sensitive than the others.
6.Dengue virus and cell autophagy
Sen YANG ; Shiyou LIU ; Yamei WEI ; Xu HAN ; Yanan CAI ; Zhanying HAN ; Shunxiang QI ; Qi LI
Chinese Journal of Experimental and Clinical Virology 2020;34(1):107-111
Dengue viruses(DENV) are seriously affected by cell autophagy in intracellular replication,transmission between host,and the pathogenic mechanism.Here,the latest research progress of complex interplay between DENV and cell autophagy were reviewed in this paper.Autophagy,a cellular procedural protein degradation pathway generally possessed by all eukaryotes plays a key role in response to outside pressure and maintaining cellular homeostasis.This catabolic pathway also promotes cell survival against the invasion of pathogens such as various viruses.However,autophagy plays an opposite role in the replication of DENV.Autophagy not only provides a replication site for viruses to replicate,but also provides a source of energy for this process.Cell autophagy also participates in the pathogenesis of some DENV infection.In short,autophagy contributes to the replication of DENV.
7. Analysis of molecular characteristics of aggregation epidemic induced by norovirus infection in Hebei province, 2015-2016
Yingying LIU ; Qiuli YU ; Tong SU ; Wenna ZHAO ; Yun XIE ; Wen BAO ; Shunxiang QI
Chinese Journal of Experimental and Clinical Virology 2017;31(5):434-437
Objective:
To understand epidemiological characteristics of the pathogens and evolution of the genotype associated with infectious diarrhea epidemic caused by norovirus in Hebei Province.
Methods:
A total of 8 infectious diarrhea outbreaks caused by norovirus were reported from Jan 2015 to Dec 2016, of which epidemic treatment materials and specimens were collected at the same time. Norovirus nucleic acid was detected by using real-time PCR, and the partial ORF2 of the all positive specimens were amplified by RT-PCR and sequenced. Phylogenetic tree was constructed by using Mega5.2 based on partial ORF2 sequences of norovirus to perform phylogenetic analysis.
Results:
A total of 8 norovirus outbreaks, involving 265 cases who were mainly for residential inhabitents, children and students, were reported during this period, and the overall attack rate ranged from 0.70% to 8.13%. The overall positive detection rate of norovirus was 66.25%. The PCR products were sequenced, and sequencing result were obtained for 28 samples, which included GⅠ.3, GⅡ.2, GⅡ.4, GⅡ.13 and GⅡ.17.
Conclusions
Multiple genotypes of infectious diarrhea outbreaks caused by norovirus were found in Hebei province.
8.Investigation of etiology and prognosis of the hospitalized patients with chronic obstructive pulmonary disease during acute exacerbation
Xixin YAN ; Haibo XU ; Cha TIAN ; Shunxiang QI ; Caizhi HAN ; Suyin LI ; Rizhen ZHAO ; Congli YANG ; Feifei LIU ; Yuling WANG ; Xiaowen HAN ; Fen PING ; Chaoying JIANG ; Pule JIN
Chinese Journal of Practical Internal Medicine 2001;0(04):-
0.05).The concentration of IL-6 in sputum of multi-virus infection group(122.51?39.86)ng/L was higher than in single virus infection group(65.30?34.92)ng/L.The concentration of IL-6 in sputum of bacteria-virus mixed infection group(120.31?46.62)ng/L was higher than in bacteria or virus single infection group(83.61?47.83)ng/L.Conclusion Streptococcus pneumonia and influenza virus A infection are important factors in AECOPD at early stage.Virus infection would prolong recovery time,increase inflammation of the airway and even induce bacteria infection.Therefore,we should pay more attention to the virus infection in COPD patients,especially A-type influenza virus.
9.Effects of daily mean temperature on the incidence of other infectious diarrhea in Hebei Province
Tong SU ; Wenna ZHAO ; Yingying LIU ; Yun XIE ; Qiuli YU ; Qi LI ; Shunxiang QI
Chinese Journal of Infectious Diseases 2022;40(3):159-164
Objective:To explore the lag effect and correlation between daily average temperature and the incidence of other infectious diarrhea in Hebei Province.Methods:The data of meteorological factors (including temperature and average daily temperature) and the daily incidence of other infectious diarrhea in Zhangjiakou City, Chengde City, Tangshan City, Qinhuangdao City, Baoding City, Langfang City, Cangzhou City, Shijiazhuang City, Hengshui City, Xingtai City, and Handan City in Hebei Province from 2017 to 2020 were collected. Eleven prefecture-level cities were divided into four regions, including east, north, middle and south regions. Distributed lag non-linear model was applied to examine the non-linear associations and the lag effect of daily mean temperature on daily incidence of other infectious diarrhea. Meanwhile, the cold and hot effects were used to estinuate the lag-response relationship on the incidence of other infectious diarrhea.Results:A total of 231 008 cases of other infectious diarrhea were reported in Hebei Province. The seasonal distribution was obvious, showing a bimodal distribution of large peaks in summer and small peaks in winter. An inverse S-shaped association between average daily temperature and cumulative risk ratio ( RR) of other infectious diarrhea was observed in Hebei Province. Both high temperature (higher than 27.50 ℃) and low temperature (less than 13.67 ℃) could increase the risk of other infectious diarrhea. When the temperature was lower than 13.00 ℃, the lag time and RR had a U-shaped association (lag four to seven days, 23 to 30 days). Meanwhile, when it was higher than 13.00 ℃, it had an inverted U-shaped association (lag 5 to 21 days). A comparison of four regions of Hebei Province showed that the lag time from south to north was extended from six days to 30 days at low temperature effects with temperature P5=-7.24 ℃. When the temperature getting hot ( P95=28.25 ℃), the risk occurred at lag 0 days, and the lag time gradually got short from north to south. Thus, the high temperature effect reached maximum quickly with a relative short duration. Conclusions:The inverse S-shaped non-linear association between daily average temperature and the incidence of other infectious diarrhea in Hebei Province is observed. Both low temperature and high temperature are associated with increased risk of other infectious diarrhea. But the impact of low temperature is more notable, which has a relative long duration.
10. Spatial-temporal cluster of hemorrhagic fever with renal syndrome in Hebei province, 2005-2016
Yanan CAI ; Xu HAN ; Yamei WEI ; Zhanying HAN ; Shiyou LIU ; Yanbo ZHANG ; Yonggang XU ; Shunxiang QI ; Qi LI
Chinese Journal of Epidemiology 2019;40(8):930-935
Objective:
To explore the spatial-temporal distribution and epidemic characteristics of hemorrhagic fever with renal syndrome (HFRS) in Hebei province from 2005 to 2016.
Methods:
Records of HFRS cases reported from each county in Hebei during January 2005 to December 2016 were collected from National Notifiable Disease Surveillance System (NNDSS). Global and local spatial association statistics were used to measure the spatial autocorrelation and software GeoDa 1.2.0. Software SaTScan 9.4.1 was used to analyze spatiotemporal clusters. Software ArcGIS 10.2 was used to visualize the yearly scan results.
Results:
In Hebei province, a total of 8 437 human HFRS cases reported from 170 counties with an annual incidence rate of 0.99/100 000 population during 2005-2016. The peak incidence season was spring. Global spatial autocorrelation analysis on the incidence of HFRS at county-level showed that the value of Moran’s