1.Salmonella Serovars from Foodborne and Waterborne Diseases in Korea, 1998-2007: Total Isolates Decreasing Versus Rare Serovars Emerging.
Journal of Korean Medical Science 2010;25(12):1693-1699
Salmonella enterica has been one of the most widespread foodborne pathogens in Korea. Between 1998 and 2007, a total of 9,472 Salmonella isolates were identified from foodborne and waterborne illness patients. During that time, Korea was transitioning into a developed country in industry as well as in its hygiene system. Although the isolation number of total Salmonella including serovar Typhi has decreased since 1999, the isolation of rare Salmonella serovars has emerged. Three most prevalent serovars during 1998-2007 were S. enterica Typhi, S. enterica Enteritidis, and S. enterica Typhimurium. There were remarkable outbreaks caused by rare serovars such as S. enterica Othmarschen, S. enterica London and S. enterica Paratyphi A, and overseas traveler-associated infections caused by S. enterica Weltevreden and S. enterica Anatum. Salmonella serovars from overseas travelers made a diverse Salmonella serovar pool in Korea. This study is the first review of the status of the human Salmonella infection trend in a developing country during 1998-2007. Newly emerging rare Salmonella serovars should be traced and investigated to control new type pathogens in the developed world.
Food Microbiology
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Humans
;
Republic of Korea
;
Salmonella/classification/genetics/*isolation & purification
;
Salmonella Infections/epidemiology/etiology/*microbiology
;
Serotyping
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Water Microbiology
2.A Virulent Salmonella enterica Serovar Enteritidis Phage SE2 with a Strong Bacteriolytic Activity of Planktonic and Biofilmed Cells.
Birendra R TIWARI ; Shukho KIM ; Jungmin KIM
Journal of Bacteriology and Virology 2013;43(3):186-194
Salmonella enterica serovar Enteritidis is one of the major food borne pathogens. Utilizing lytic bacteriophages against this pathogen can be a new and effective approach for the prevention of food-contamination and food-borne infection. In this study, we isolated and characterized a Salmonella Enteritidis specific lytic bacteriophage (phage SE2). The bacteriolytic activity of planktonic and biofilmed cells against an antibiotic resistant strain of Salmonella Enteritidis was also evaluated. Phage SE2 revealed an efficient bacteriolytic effect with biofilm dispersing ability and could maintain its virulence even at extreme pH and temperature. It can be a potential biotherapeutic agent against Salmonella Enteritidis.
Bacteriophages
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Biofilms
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Drug Resistance
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Hydrogen-Ion Concentration
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Plankton
;
Salmonella
;
Salmonella enterica
;
Salmonella enteritidis
;
Sprains and Strains
3.Antimicrobial Susceptibility and Characterization of Propionibacterium acnes by Multilocus Sequence Typing and Repetitive-Sequence-Based PCR.
Shukho KIM ; Hyesoon SONG ; Weon Ju LEE ; Jungmin KIM
Journal of Bacteriology and Virology 2016;46(3):135-141
Propionibacterium acnes, a gram-positive, anaerobic, and aerotolerant bacterium that is found frequently in the skin as part of the human microbiome causes inflammatory acne, shoulder infection, and the contamination of medical devices. The study goals were the antibiotic resistant and molecular epidemiological characterization of the P. acnes isolates in Korea. A total of 22 P. acnes isolates originated from diverse patients were obtained from three National Culture Collections for Pathogens in South Korea. The hemolytic properties and minimum inhibitory concentrations (MIC) of five antibiotics (tetracycline, doxycycline, clindamycin, erythromycin, and minocycline) were determined. Only one isolate showed high MIC values and resistance to all five antibiotics. Genotypic characterization was achieved by multilocus sequence typing (MLST) for eight loci (aroE, guaA, tly, camp2, atpD, gmk, lepA, and sodA) and repetitive-sequence-based PCR (rep-PCR) analysis using the DiversiLab kit. MLST revealed four phylogroups that were type IA₁ (27.3%), type IA₂ (18.2%), type IB (13.6%), and type II (40.9%). Rep-PCR results demonstrated three clusters that were cluster I (39.1%), cluster II (45.5%), and cluster III (13.6%). The isolates of cluster I were part of phylogroup type IA (both IA₁ and IA₂), and the isolates of cluster II belonged to phylogroup type II. All isolates of phylogroup type IB were hemolytic and belonged to cluster III. The results of rep-PCR clustering analysis showed a good correlation with those of MLST phylogroups, suggesting that rep-PCR could be an alternative method to track P. acnes subtype lineages.
Acne Vulgaris
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Anti-Bacterial Agents
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Clindamycin
;
Doxycycline
;
Erythromycin
;
Humans
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Korea
;
Methods
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Microbial Sensitivity Tests
;
Microbiota
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Multilocus Sequence Typing*
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Polymerase Chain Reaction*
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Propionibacterium acnes*
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Propionibacterium*
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Shoulder
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Skin
4.Detection of Bacterial Species in Chronic Periodontitis Tissues at Different Stages of Disease Severity.
Da Le YOON ; Shukho KIM ; Hyesoon SONG ; Yong Gun KIM ; Jae Mok LEE ; Jungmin KIM
Journal of Bacteriology and Virology 2015;45(4):364-371
The goal of this research was to determine the relationship between the stage of chronic periodontitis and the presence of six bacterial pathogens (Aggregatibacter actinomycetemcomitans: AA, Fusobacterium nucleatum: FN, Porphyromonas gingivalis: PG, Prevotella intermedia: PI, Enterococcus faecalis: EF, and Parvimonas micra: PM). Forty-six chronic periodontitis patients visiting a dental hospital were included in this investigation. They were classified into four chronic periodontitis stages based on the sulcus bleeding index value and the probing depth. The tissue samples from the periodontal surgery were used for a direct PCR detection assay. A total of 49 samples from 46 patients were collected and classified into four chronic periodontitis groups (N: 6, P1: 13, P2: 18, P3: 12). The PCR assay showed that FN, PI, and PM were involved from the beginning of chronic periodontitis (P1), while AA and PG existed regardless of the disease stages. EF was strongly linked to the P3 stage of the disease. In order to assess the effect of dental treatments on patients with chronic periodontitis, EF should be a critical marker for P3 patients, while FN, PI, and PM would be good indicators for chronic periodontitis.
Chronic Periodontitis*
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Enterococcus faecalis
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Fusobacterium nucleatum
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Hemorrhage
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Humans
;
Polymerase Chain Reaction
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Porphyromonas gingivalis
;
Prevotella intermedia
5.Prevalence of Salmonella Serovars Isolated from Domestic Residents and Overseas Travelers in Korea, 2004~2005.
Shukho KIM ; Sung Hun KIM ; Sung Guen CHUN ; Eun Sook CHOI ; Bok Kwon LEE
Journal of Bacteriology and Virology 2006;36(2):69-72
Salmonella is a communicable enteric pathogen commonly found in foodborne diseases. We showed the prevalence of S. enterica serovars from domestic residents and overseas travelers. In 2004-2005 years, Weltevreden, Anatum, and Tallahassee were predominant Salmonella serovars from overseas travelers, but Enteritidis, Typhimurium, and Typhi were major Salmonella serovars from domestic residents. In order to analyze the trends of prevalence and distribution of the serovars, Salmonella surveillance with an international study is essential for the disease control and prevention.
Foodborne Diseases
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Korea*
;
Prevalence*
;
Salmonella*
6.Rapid Serological Identification for Monophasic Salmonella Serovars with a hin Gene: Specific Polymerase Chain Reaction.
Sung Hun KIM ; Shukho KIM ; Sang Won LEE ; Yeon Ho KANG ; Bok Kwon LEE
Journal of Bacteriology and Virology 2005;35(4):291-298
Salmonellosis is one of the most common food born diseases in Korea. However, it takes more than 8 days and many expensive antiserums are used for the identification of Salmonella serovars since the microorganism easily undergoes phase variation. According to the data that 65.5% of Salmonella isolates in 2000~2004 year had monophasic flagella, we have developed a rapid serological identification method using a hin gene-specific polymerase chain reaction (PCR) for monophasic Salmonella isolates that does not require the time-consuming phase conversion experiments. Using our new method, 'hin specific PCR-based serological test', we could identify serovars of monophasic Salmonella in 4 days. For the purpose of rapid identification of salmonella serovars collected from outbreaks and sporadic cases, hin specific PCR-based serological tests will be a fast and efficient method.
Disease Outbreaks
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Flagella
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Korea
;
Polymerase Chain Reaction*
;
Salmonella Infections
;
Salmonella*
;
Serologic Tests
7.Vertebral Osteomyelitis due to Salmonella enterica serovar Othmarschen in an Immunocompetent Patient.
Byong Kwan CHOI ; Shukho KIM ; Hee Jin HUH ; Eu Suk KIM ; Sang Min LEE ; Seok Lae CHAE
Infection and Chemotherapy 2008;40(4):237-240
Salmonellae have been recognized as uncommon etiological organisms causing osteomyelitis in patients with sickle cell anemia and other immunocompromised conditions. A 34-year old man who had no underlying illness except for congenital block vertebrae at T10-11 vertebrae was admitted to the hospital due to lower back pain and fever for a week. Vertebral osteomyelitis was diagnosed and surgical drainage was performed. Salmonella enterica serovar Othmarschen was isolated from the drained pus. Therapy with ciprofloxacin for 8 weeks was successful without relapse. We describe here a case of vertebral osteomyelitis which was caused by S. Othmarschen in an immunocompetent patient.
Anemia, Sickle Cell
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Ciprofloxacin
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Drainage
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Fever
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Humans
;
Low Back Pain
;
Osteomyelitis
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Recurrence
;
Salmonella
;
Salmonella enterica
;
Spine
;
Suppuration
8.Vertebral Osteomyelitis due to Salmonella enterica serovar Othmarschen in an Immunocompetent Patient.
Byong Kwan CHOI ; Shukho KIM ; Hee Jin HUH ; Eu Suk KIM ; Sang Min LEE ; Seok Lae CHAE
Infection and Chemotherapy 2008;40(4):237-240
Salmonellae have been recognized as uncommon etiological organisms causing osteomyelitis in patients with sickle cell anemia and other immunocompromised conditions. A 34-year old man who had no underlying illness except for congenital block vertebrae at T10-11 vertebrae was admitted to the hospital due to lower back pain and fever for a week. Vertebral osteomyelitis was diagnosed and surgical drainage was performed. Salmonella enterica serovar Othmarschen was isolated from the drained pus. Therapy with ciprofloxacin for 8 weeks was successful without relapse. We describe here a case of vertebral osteomyelitis which was caused by S. Othmarschen in an immunocompetent patient.
Anemia, Sickle Cell
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Ciprofloxacin
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Drainage
;
Fever
;
Humans
;
Low Back Pain
;
Osteomyelitis
;
Recurrence
;
Salmonella
;
Salmonella enterica
;
Spine
;
Suppuration
9.Epidemiology of Salmonella enterica Serotype Typhi Infections in Korea for Recent 9 Years: Trends of Antimicrobial Resistance.
Sunmi YOO ; Hyunjoo PAI ; Jeong hum BYEON ; Youn Ho KANG ; Shukho KIM ; Bok Kwon LEE
Journal of Korean Medical Science 2004;19(1):15-20
The aim of this study is to characterize the epidemiological features of typhoid fever, categorized as class 1 notifiable disease in Korea and to analyze the recent change of antimicrobial resistance of Salmonella enterica serotype Typhi isolated nationwide. We retrospectively analyzed the 1,692 culture-proven cases from 1992 to 2000, using the data of the Korean National Institute of Health. The overall incidence of culture-proven typhoid fever was 0.41 per 100,000 population. It occurred all over the country, but the southeastern part of Korean peninsula had the higher incidence rate than other areas. There were several outbreaks suspected, of which two outbreaks were confirmed. The resistance rate against chloramphenicol showed mild increase, but the ampicillin, trimethoprim/sulfamethoxazole, kanamycin, or nalidixic acid resistance remained at the similar levels for the past 9 yr. There were 21 (1.3%) multidrug-resistant (MDR) strains isolated since 1992, and the number of those has increased. Two strains resistant to ciprofloxacin were first identified in Korea.
Ampicillin/pharmacology
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Anti-Bacterial Agents/pharmacology
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Chloramphenicol/pharmacology
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*Drug Resistance, Microbial
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Drug Resistance, Multiple
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Human
;
Kanamycin/pharmacology
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Korea
;
Nalidixic Acid/pharmacology
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Retrospective Studies
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Salmonella Infections/*epidemiology
;
Salmonella enterica/*metabolism
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Seasons
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Serotyping
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Support, Non-U.S. Gov't
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Time Factors
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Trimethoprim/pharmacology