1.Molecular Genetic Characteristics of Trimethoprim Resistance in Clinical and Normal Fecal Isolates of Escherichia coli.
Sung Yong SEOL ; Dong Taek CHO ; Yoo Chul LEE ; Haeng Seop SHIN ; Neung Hee KIM
Journal of the Korean Society for Microbiology 1999;34(4):347-361
One hundred and thirty trimethoprim-resistant R plasmids derived from of Escherichia coli isolated from clinical specimens and feces of healthy collegians were examined for incompatibility, EcoRI endonuclease restriction fragment pattern, and Southern hybridization with DHFR I, II, III, V, and VII probe. 1. Most trimethoprim-resistant R plasmids were resistant to ampicillin, tetracycline, chloramphenicol, gentamicin, and kanamycin, and showed multiple drug resistance and various antimicrobial resistance patterns. 2. Trimethoprim-resistant R plasmids ranged from 90 to 50 kilobase and 42.3% of R plasmids tested were classified to incompatibilty group Inc FI, Inc FII or Inc FIV, 3. Among 48 random selected R plasmids from various origin, 14 R plasmids (including 9 of 14 Inc FII plasmids and 3 of 14 Inc FI plasmids) hybridized with DHFR VII oligonucleotide probe but others did not respond to any of DHFR probes used. 4. Most R plasmids showed various EcoRI endonuclease fragments and different reaction sites by Southern hybridization. Six plasmids showed identical or nearly identical molecular weight, EcoRI endonuclease fragment patterns and different sites of Southern hybridization. But 2 Inc FII plasmids derived from urine and feces showed identical pattern. These findings, if confirmed by further studies, suggest that normal flora E. coli can act as reservoir of resistant genes and, consequently, as a factor in the dissemination of these genes among enteric pathogens and need to be examined further.
Ampicillin
;
Chloramphenicol
;
Deoxyribonuclease EcoRI
;
Drug Resistance, Multiple
;
Escherichia coli*
;
Escherichia*
;
Feces
;
Gentamicins
;
Immunodeficiency Virus, Feline
;
Kanamycin
;
Molecular Biology*
;
Molecular Weight
;
Plasmids
;
R Factors
;
Tetracycline
;
Trimethoprim Resistance*
;
Trimethoprim*
2.A 6 year experience with the St. Jude Medical cardiac valve prosthesis.
Kwang Hyun CHO ; Youn Ho WHANG ; Yang Haeng LEE ; Shin Hyun JUNG ; Kang Joo CHOI
The Korean Journal of Thoracic and Cardiovascular Surgery 1992;25(3):296-306
No abstract available.
Heart Valve Prosthesis*
;
Heart Valves*
3.Mechanism of beta-lactam Resistance in Gram-negative Rods Isolated from Surgical Site Infection.
Haeng Seop SHIN ; Yong Shin KIM ; Dong Taek CHO
Korean Journal of Infectious Diseases 1999;31(5):390-401
BACKGROUND: There have been few studies about the kinds of species causing surgical site infections and their resistance pattern in Korea. An increase of extended-spectrum beta-lactamase (ESBL) producing strains is a worldwide problem. However, there is not enough data on the prevalence of ESBL-producing strains in Korea and the true extent of this problem seems to be under-recognized. METHODS: Minimal inhibitory concentrations of gram-negative bacilli isolated from surgical site infections were tested using the standard agar dilution method according to the National Committee for Clinical Laboratory Standards. To identify and characterize beta-lactamases, we performed conjugation test, isoelectric focusing, Southern hybridization, and polymerase chain reaction. RESULTS: A total of 54 strains of gram-negative enteric bacilli were identified:two strains of Acinetobacter spp., one of Citrobacter freundii, nine of Enterobacter cloacae, one of Enterobacter sakazakii, one of Escherichia coli, two of Klebsiella pneumoniae, one of Morganella morganii, one of Proteus vulgaris, 23 of Pseudomonas aeruginosa, four of Xanthomonas maltophila, and nine of Serratia marcescens. Three strains produced ESBL. CONCLUSION: Various species of gram-negative organisms isolated from surgical site infections showed complex antibiograms to various beta-lactams, even to the new generation of antibiotics. A large proportion of these strains showed conjugally transferable, plasmid-mediated, beta-lactam resistance. Some strains were ESBL-producing. This evidence suggests that there has been a molecular evolution of beta-lactamase genes to a great extent in Korea, possibly due to indiscriminate use of antibiotics.
Acinetobacter
;
Agar
;
Anti-Bacterial Agents
;
beta-Lactam Resistance*
;
beta-Lactamases
;
beta-Lactams
;
Citrobacter freundii
;
Cronobacter sakazakii
;
Drug Resistance
;
Enterobacter cloacae
;
Escherichia coli
;
Evolution, Molecular
;
Isoelectric Focusing
;
Klebsiella pneumoniae
;
Korea
;
Microbial Sensitivity Tests
;
Morganella morganii
;
Polymerase Chain Reaction
;
Prevalence
;
Proteus vulgaris
;
Pseudomonas aeruginosa
;
Serratia marcescens
;
Xanthomonas
4.Mechanism of beta-lactam Resistance in Gram-negative Rods Isolated from Surgical Site Infection.
Haeng Seop SHIN ; Yong Shin KIM ; Dong Taek CHO
Korean Journal of Infectious Diseases 1999;31(5):390-401
BACKGROUND: There have been few studies about the kinds of species causing surgical site infections and their resistance pattern in Korea. An increase of extended-spectrum beta-lactamase (ESBL) producing strains is a worldwide problem. However, there is not enough data on the prevalence of ESBL-producing strains in Korea and the true extent of this problem seems to be under-recognized. METHODS: Minimal inhibitory concentrations of gram-negative bacilli isolated from surgical site infections were tested using the standard agar dilution method according to the National Committee for Clinical Laboratory Standards. To identify and characterize beta-lactamases, we performed conjugation test, isoelectric focusing, Southern hybridization, and polymerase chain reaction. RESULTS: A total of 54 strains of gram-negative enteric bacilli were identified:two strains of Acinetobacter spp., one of Citrobacter freundii, nine of Enterobacter cloacae, one of Enterobacter sakazakii, one of Escherichia coli, two of Klebsiella pneumoniae, one of Morganella morganii, one of Proteus vulgaris, 23 of Pseudomonas aeruginosa, four of Xanthomonas maltophila, and nine of Serratia marcescens. Three strains produced ESBL. CONCLUSION: Various species of gram-negative organisms isolated from surgical site infections showed complex antibiograms to various beta-lactams, even to the new generation of antibiotics. A large proportion of these strains showed conjugally transferable, plasmid-mediated, beta-lactam resistance. Some strains were ESBL-producing. This evidence suggests that there has been a molecular evolution of beta-lactamase genes to a great extent in Korea, possibly due to indiscriminate use of antibiotics.
Acinetobacter
;
Agar
;
Anti-Bacterial Agents
;
beta-Lactam Resistance*
;
beta-Lactamases
;
beta-Lactams
;
Citrobacter freundii
;
Cronobacter sakazakii
;
Drug Resistance
;
Enterobacter cloacae
;
Escherichia coli
;
Evolution, Molecular
;
Isoelectric Focusing
;
Klebsiella pneumoniae
;
Korea
;
Microbial Sensitivity Tests
;
Morganella morganii
;
Polymerase Chain Reaction
;
Prevalence
;
Proteus vulgaris
;
Pseudomonas aeruginosa
;
Serratia marcescens
;
Xanthomonas
5.Molecular Epidemiologic Analysis of Enterobacter Isolated from Clinical Specimen.
Sung Yong SEOL ; Dong Taek CHO ; Yoo Chul LEE ; Haeng Seop SHIN ; Hee Kyung CHANG ; Ki Shik SHIN
Journal of the Korean Society for Microbiology 1997;32(5):487-502
Eighty-nine isolates of Enterobacter spp. from two university hospitals were analyzed by phenotypic and genotypic characteristics for epidemiologic investigation. Most strains were isolated from sputum, urine, wound, pus and catheter tip. Most isolates of Enterobacter spp. were resistant to ampicillin, cefazolin and cefoxitin and 39% of E. cloacae isolates were also resistant to other cephalosporins and aminoglycoside antibiotics except amikacin but all strains were highly susceptible to imipenem and ciprofloxacin. Twenty-six antimicrobial resistance patterns were obtained from E. clacae, but E. aerogenes showed only 4 patterns. Fourty-two plasmid profiles were identified, but plasmid was not detected from 28.4% of E. cloacae and 58% of E. aerogenes. Six biotypes from E. cloacae and three biotypes from E. aerogenes were obtained by carbohydrate metabolism. Fourteen strains of E. cloacae carried conjugative R plasmids and these plasmids were further analyzed. Among them, ten plasmids showed identical antibiogram, molecular weight, and pI value by isoelectric focusing and nearly identical restriction endonuclease fragment pattern. Their parental strains had identical antibiogram, biotype, plasmid profile, and were isolated from 4 different specimens including 6 catheter tips of different patients. But most clinical isolates showed various types of combination and seemed to be different strains. These results indicate that the epidemic strain were present in this hospital and the combination of antibiogram and plasmid analysis can be used to discriminate the epidemic strains of multi-resistant E. cloacae.
Amikacin
;
Ampicillin
;
Anti-Bacterial Agents
;
Carbohydrate Metabolism
;
Catheters
;
Cefazolin
;
Cefoxitin
;
Cephalosporins
;
Ciprofloxacin
;
Cloaca
;
DNA Restriction Enzymes
;
Enterobacter*
;
Hospitals, University
;
Humans
;
Imipenem
;
Isoelectric Focusing
;
Microbial Sensitivity Tests
;
Molecular Weight
;
Parents
;
Plasmids
;
R Factors
;
Sputum
;
Suppuration
;
Wounds and Injuries
6.Involvement of IS26 element in the evolution and dissemination of blaSHV-2a and blaSHV-12.
Jungmin KIM ; Haeng Seop SHIN ; Dong Taek CHO
Journal of the Korean Society for Microbiology 2000;35(3):263-271
A clinical isolate of Klebsiella pneumoniae K7746 produced the extended-spectrum beta-lactamase (ESBL) SHV-12. A 6.6 kb BamHI fragment containing the blaSHV-12 gene of K7746 strain was cloned into pCRScriptCAM vector resulting in the recombinant plasmid p7746-C1. The restriction map of 3.6 kb inserted DNA and sequences immediately surrounding blaSHV-12 of p7746-C1 were homologous to plasmid pMPA2a carrying blaSHV-2a. In addition, both blaSHV-12 and blaSHV-2a were expressed from a common hybrid promoter made of the -35 region derived from the left inverted repeat of IS26 and the -10 region from the blaSHV promoter itself. The results indicate that blaSHV-12 and blaSHV-2a may have evolved from a common ancestor in the sequential order of blaSHV-2a first, followed by blaSHV-12. Furthermore, by the PCR mapping method using primers corresponding to the IS26 and blaSHV, the association between IS26 and blaSHV was studied in 12 clinical isolates carrying blaSHV-2a, 27 clinical isolates carrying blaSHV-12, and 5 reference strains carrying blaSHV-1 to blaSHV-5. All 39 strains carrying blaSHV-2a or blaSHV-12 were positive by the PCR, providing confirmative evidence that IS26 has been involved in the evolution and dissemination of blaSHV-2a and blaSHV-12. But 5 reference strains carrying blaSHV-1 to blaSHV-5 were negative by the PCR. Therefore, we concluded that the molecular evolutionary pathway of blaSHV-2a and blaSHV-12 may be different from that of other blaSHV-ESBL, e.g., blaSHV-2, blaSHV-3, blaSHV-4, and blaSHV-5.
beta-Lactamases
;
Clone Cells
;
DNA
;
Klebsiella pneumoniae
;
Plasmids
;
Polymerase Chain Reaction
7.Food and Nutrient Consumption Patterns of the Korean Adult Population by Income Level - 2001 National Health and Nutrition Survey.
Bok Hee KIM ; Joung Won LEE ; Yoonna LEE ; Haeng Shin LEE ; Young Ai JANG ; Cho il KIM
Korean Journal of Community Nutrition 2005;10(6):952-962
To explore the relationship between economic status and food and nutrient intake patterns, the 2001 National Health and Nutrition Survey result was analyzed. Dietary intake data of 6,978 Korean adults of 20 years and older who participated in the 2001 National Health and Nutrition Survey were used along with their demographic data. Economic status of the subjects was classified into the following 4 groups based on the self-reported average monthly income of household with reference to the minimum monthly living expenses (MLE) in 2001: low<100% MLE < or = middle<200% MLE < or = high<300% MLE < or = higher. Individuals in the higher income class had significantly higher mean intake for most of the nutrients including energy, protein, carbohydrate, fat, calcium, thiamin, riboflavin, niacin and vitamin C, and a higher percentage of energy intake from fat. In addition, they consumed more animal foods including meats, eggs, fish/shellfish, milk/dairy products and fats. On the other hand, the mean intakes of individuals in the lower economic class for calcium, vitamin A, and riboflavin were lower than 75% of RDAs. And, there was a predominant difference in contribution of fat to total energy intake among the groups of different economic status. These results showed that household income is an important factor influencing the food and nutrient intake patterns of the Korean adult population. Although individuals at different age classes may respond differently to a change in economic status, developing and implementing nutrition policy and intervention programs for those nutritionally vulnerable groups should consider the economic status as an important factor to customize and differentiate the content of the program.
Adult*
;
Animals
;
Ascorbic Acid
;
Calcium
;
Eggs
;
Energy Intake
;
Family Characteristics
;
Fats
;
Hand
;
Humans
;
Meat
;
Niacin
;
Nutrition Policy
;
Nutrition Surveys*
;
Ovum
;
Riboflavin
;
Vitamin A
8.Clinical review about corrective surgery of tetralogy of Fallot.
Kwang Hyun CHO ; Youn Ho WHANG ; Yang Haeng LEE ; Jong Weon PARK ; Shin Hyun JUNG ; Kang Joo CHOI
The Korean Journal of Thoracic and Cardiovascular Surgery 1991;24(7):674-684
No abstract available.
Tetralogy of Fallot*
9.Identification of Acinetobacter calcoaceticus - Acinetobacter baumannii Complex by Ribotyping.
Dong Taek CHO ; Je Chul LEE ; Jung Min KIM ; Haeng Seop SHIN ; Hee Kyung CHANG ; Su Yul AHN
Journal of the Korean Society for Microbiology 1998;33(6):605-617
Acinetobacter species encounters frequently with clinical specimens and now accounts for a substantial proportion of endemic nosocomial infections in Korea. Recent trends indicate that the antimicrobial resistant strains of Acinetobacter species are increasing. Sixty-one strains were isolated from specimens of patients suspected of nosocomial infections during 1991 to 1996. At present, phenotypic identification of Acinetobacter using biochemical test may not be reliable and resulted in the difficulty to clarify the source of infections and epidemiological study of hospital-acquired infections. Aware of the importance of rational taxonomic proposal for these isolates, correct species identification of these organisms by molecular typing method was carried out. A total of fifty-four strains of A. calcoaceticus-A. baumannii complex species which were identified to genospecies 2 and 13 by biochemical characteristics was subjected to identify by ribotyping using restriction endonuclease EcoRI, ClaI, and SalI. Of fifty-four strains, twenty-five strains were identified as A. baumannii (genospecies 2) and twenty-one strains as genospecies 13, and six strains changed to genospecies 3, and the rest two strains were confirmed as A. haemolyticus (genospecies 4). This result suggests that the ribotyping may be of value for identification of genospecies and epidemiological information of Acinetobacter strains.
Acinetobacter baumannii*
;
Acinetobacter calcoaceticus*
;
Acinetobacter*
;
Cross Infection
;
DNA Restriction Enzymes
;
Humans
;
Korea
;
Molecular Typing
;
Ribotyping*
10.Epidemiology of Serratia marcescens Isolates by Transferable Resistance Gene Analysis.
Sung Yong SEOL ; Dong Taek CHO ; Yoo Chul LEE ; Haeng Seop SHIN ; Hee Kyung CHANG ; Kyung Sook KIM
Journal of the Korean Society for Microbiology 1998;33(5):485-497
Conjugative R plasmids derived from 74 clinical isolates of Serratia marcescens were epidemiologically analyzed for antimicrobial resistance, EcoRI restriction endonuclease analysis and Southern hybridization with DHFR, TEM and SHV probe. 1. Resistance frequency of isolates against various B-lactam antibiotics was changed by year. 2. Twenty (27%) resistant strains transferred 32 R plasmids to E. coli or Klebsiella by mixed culture. Most strains isolated from 1994 to 1996 transferred only trimethoprim resistance but most strains isolated from 1997 did resistances against gentamicin (Gm) and B-lactams including ampicillin (Ap), carbenicillin (Cb), cefazolin (Cz), cefaloridine (Cl), cefamandole (Cn). 3. Ten plasmids of GmApCbCzC1Cn or GmApCbCzC1 pattern and 3 plasmids of TcSuGmTbApCbCzC1 pattern respectively showed identical EcoRI restriction endonuclease digestion patterns and hybridized fragment patterns with TEM-1 probe by Southern hybridization. These results indicate that the epidemic plasmids carrying blamM gene were present in this hospital in 1997 and molecular genetic analysis of R plasmids can be used to discriminate S. marcescens isolates for epidemiologic studies.
Ampicillin
;
Anti-Bacterial Agents
;
Carbenicillin
;
Cefamandole
;
Cefazolin
;
Cephaloridine
;
Digestion
;
DNA Restriction Enzymes
;
Epidemiologic Studies
;
Epidemiology*
;
Gentamicins
;
Klebsiella
;
Molecular Biology
;
Plasmids
;
R Factors
;
Serratia marcescens*
;
Serratia*
;
Trimethoprim Resistance