1.Epstein-Barr virus positive anaplastic-like plasmacytoma: report of a case.
Wen-sheng LI ; Xiao-ge ZHOU ; Jian-lan XIE
Chinese Journal of Pathology 2013;42(3):203-204
ADP-ribosyl Cyclase 1
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metabolism
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Aged
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Epstein-Barr Virus Infections
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Herpesvirus 4, Human
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isolation & purification
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Humans
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Interferon Regulatory Factors
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metabolism
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Ki-67 Antigen
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metabolism
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Male
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Nasal Cavity
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Nose Neoplasms
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metabolism
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pathology
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surgery
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virology
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Plasmacytoma
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metabolism
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pathology
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surgery
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virology
2.Overexpression and RNAi vectors built for key secondary metabolic pathway genes PAL, HMGR, PGT of Arnebia euchroma.
Teng XIE ; Yu-Zhong LIU ; Sheng WANG ; Tan LIU ; Li-Ping KANG ; Lan-Ping GUO
China Journal of Chinese Materia Medica 2014;39(23):4538-4543
Arnebia euchroma is the main source for medicinal herb Zicao. and its most important component shikonin compounds have high medicinal and industrial value. This research is aimed to build overexpression vectors and RNAi vectors for key secondary metabolism genes of A. euchroma, and bulid platform for constructions of related transgenic lines using GATEWAY technology. To build genetic material based genetic research platform is to provide a great convenience for digging and functional verification of the genes on secondary metabolic pathway, and also to fill the gaps in transgenic research of A. euchroma. This study is also important for the cultivation of shikonin high-yielding strains of A. euchroma.
Boraginaceae
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genetics
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metabolism
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Genetic Vectors
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genetics
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metabolism
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Plant Proteins
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genetics
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metabolism
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RNA Interference
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Secondary Metabolism
3.Transcriptome-based bioinformatics analysis of Arnebia euchroma ERF transcription factor family.
Teng XIE ; Sheng WANG ; Lei HUANG ; Xue WANG ; L-ping KANG ; Lan-ping GUO
China Journal of Chinese Materia Medica 2014;39(24):4732-4739
Twenty-seven ERF transcription factor family genes were isolated from Arnebia euchroma, with an average size of 1,010 bp, each gene encoded a 212 amino acids on average. The gene structure and expression of physicochemical properties, subcellular localization, signal peptides, senior structural domains and conservative forecasting, and analysis of A. euchroma were studied comparing with ERF gene gi261363612 of Lithospermum erythrorhizon, and phylogenetic analysis of A. euchroma ERF family was carried out. The results showed the existence of three conserved domains in this family, the senior structure based on random coil and it clustered into CBF/DREB and ERF subfamilies.
Amino Acid Motifs
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Amino Acid Sequence
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Boraginaceae
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genetics
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Cloning, Molecular
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Computational Biology
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Genome, Plant
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genetics
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High-Throughput Nucleotide Sequencing
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Medicine, Chinese Traditional
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Molecular Sequence Data
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Multigene Family
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Phylogeny
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Plant Proteins
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chemistry
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genetics
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Plants, Medicinal
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Protein Structure, Secondary
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Protein Structure, Tertiary
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Sequence Analysis, DNA
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Transcription Factors
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chemistry
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genetics
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Transcriptome
4.EBV-positive diffuse large B-cell lymphoma in young individual: report of a case.
Wen-sheng LI ; Jian-lan XIE ; Ming ZHANG ; Xiao-ge ZHOU
Chinese Journal of Pathology 2013;42(2):128-129
Adult
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Antigens, CD20
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metabolism
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Antineoplastic Combined Chemotherapy Protocols
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therapeutic use
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CD3 Complex
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metabolism
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Cyclophosphamide
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therapeutic use
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Diagnosis, Differential
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Doxorubicin
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therapeutic use
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Epstein-Barr Virus Infections
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drug therapy
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metabolism
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pathology
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Follow-Up Studies
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Herpesvirus 4, Human
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Hodgkin Disease
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Humans
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Lymphoma, Large B-Cell, Diffuse
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drug therapy
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metabolism
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pathology
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virology
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Male
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Prednisone
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therapeutic use
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RNA, Viral
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metabolism
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Vincristine
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therapeutic use
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Young Adult
5.In silico cloning and bioinformatics analysis of an AP2/EFR family gene from Arnebia euchroma.
Teng XIE ; Sheng WANG ; Liang-Yun ZHOU ; Jin-Fu TANG ; Lan-Ping GUO
China Journal of Chinese Materia Medica 2014;39(12):2251-2257
A cDNA sequence of Arnebia euchroma AP2/ERF named AeAP2/ERF was cloned by in silico cloning in this study, using ACX71873 sequence from Lithospermum erythrorhizon as the probe sequence. Some characters of the AP2/ERF gene and encoded protein sequences were predicted and analyzed by the bioinformatics methods, including general physical and chemical properties, hydrophobieity, signal peptide, secondary structure, localization sites in cells. Results showed that the 876 bp long gene included a 1 077 bp ORF and encoding 205 amino acid. The AeAP2/ERF protein had no signal peptide, it was a hydrophilic proteins located in nucleus. The function of the AP2/ERF protein was mainly involved with metabolism controlling and signal transduction.
Amino Acid Sequence
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Base Sequence
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Boraginaceae
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classification
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genetics
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Cloning, Molecular
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Computational Biology
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Computer Simulation
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Hydrophobic and Hydrophilic Interactions
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Molecular Sequence Data
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Phylogeny
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Plant Proteins
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genetics
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Protein Structure, Secondary
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Protein Structure, Tertiary
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Transcription Factors
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chemistry
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genetics
7.Application of bioinformatics in study of Chinese medicine resources.
Teng XIE ; Sheng WANG ; Jiong MA ; Lan-Ping GUO
China Journal of Chinese Materia Medica 2012;37(24):3684-3690
In the late 20th century, the rapid development of life sciences resulted masses of biological data, in which laws of life sciences urgently needed to be excavated. Together with the progress of computer science and technology, bioinformatics was born. Chinese medicinal resources, especially the plant resources, are the basis for the development of the Chinese pharmaceutical industry. As a new discipline and important life science research tools, bioinformatics applied rapidly in the study of Chinese medicine resources and involved in different aspects of genomics in recent years. Bioinformatics provides a new research approach to reveal the biological principles, methods and techniques and powerful tools of excavation, at the same time it is speeding researches in the field of Chinese medicine resources and the development of the industry. This article summarizes a comprehensive collection of bioinformatics application data in the study of Chinese medicine resources, prospects the application in Chinese medicine resources, and provides a basis bioinformatics information for the study of Chinese medicine resources.
Biotechnology
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methods
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Computational Biology
;
methods
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Drug Industry
;
methods
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Genomics
;
methods
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Medicine, Chinese Traditional
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methods
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Metabolomics
;
methods
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Plants, Medicinal
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genetics
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growth & development
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metabolism
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Proteomics
;
methods
8.Synthesis and biological evaluation of diarylamines with antitumor activity.
Sheng-Biao WANG ; Xiao-Feng WANG ; Lan XIE
Acta Pharmaceutica Sinica 2013;48(8):1273-1280
By structural modifications of our previous leads 1-3, 18 diarylamines were designed, synthesized and evaluated with a human tumor cell line panel, including A549, DU145, KB, and KB-vin cell lines, resulting in the discovery of new antitumor agents A6 and B2 with low micromolar G50 values ranging from 1.55-2.10 micromol x L(-1) for above cell lines, and A9 with GI50 values ranging from 1.55-2.10 micromol x L(-1) specially for DU145, KB, and KB-vin cells. Current structure-activity relationships are helpful for further lead optimization.
Amines
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chemical synthesis
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chemistry
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pharmacology
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Antineoplastic Agents
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chemical synthesis
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chemistry
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pharmacology
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Cell Line, Tumor
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Cell Proliferation
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drug effects
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Drug Design
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Drug Screening Assays, Antitumor
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Humans
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Molecular Structure
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Structure-Activity Relationship
9.Relationship between pulse wave velocity and blood pressure classification and cardiovascular risk factors stratification in patients with essential hypertension
Sheng-Lan XIE ; Jing GUO ; Xin-Hui NING ; Zhe ZHOU ; Ning WEI ; Hang ZHAO ; Xiao-Ping XIANG ;
Chinese Journal of General Practitioners 2005;0(09):-
Objective To explore the relationship between pulse wave velocity(PWV)and blood pressure classification and cardiovascular risk factors stratification in patients with essential hypertension. Methods Totally,390 patients with essential hypertension were recruited in the study and their carotid- femoral PWVs were recorded by an automatic pulse wave velocity measurement system.The patients were stratified by their cardiovascular risk factors.PWVs were compared between patients with varied blood pressures or with and without cardiovascular risk factors.Results There was no significant difference in PWV between patients of phase 1 and phase 2 hypertension,[(10.8?1.7)m/s vs.(11.9?1.2)m/s,P =0.398].PWV in patients with more than one risk factor was significantly higher than that in those with hypertension alone,[(10.4?1.4)m/s vs.(11.7?1.4)m/s,P=0.018].Conclusions PWV in hypertensive patients with one or more than one other risk factors was significantly higher than that in those without other risk factors.Cardiovascular risk factor might play a more important role in arterial stiffness.
10.Observation on therapeutic effect of simple obesity treated with acupuncture, auricular point sticking and TDP.
Ao-Shuang YU ; Jin-Sheng YANG ; Lan-Xiang WEI ; Yan-Yan XIE
Chinese Acupuncture & Moxibustion 2005;25(11):828-830
OBJECTIVETo probe into the mechanism and the best program of acupuncture for slimming.
METHODSThe patients were randomly divided into a control group (n = 60) treated with diet control and exercise, and a treatment group treated with acupuncture, auricular point sticking, TDP radiation. Changes of body weight, cholesterol (TC), triglyceride (TG) and blood sugar (BS) before and after treatment were investigated.
RESULTSThe effective rate of the treatment group (91.6%) was better than that of the control group (28.3%).
CONCLUSIONAcupuncture, auricular point sticking and TDP radiation combined with diet control and exercise are a better program for slimming, and decreasing appetite, promoting lipid decomposition metabolism are the mechanism of acupuncture in slimming.
Acupuncture Points ; Acupuncture Therapy ; Acupuncture, Ear ; Humans ; Obesity ; therapy ; Triglycerides