1.Evaluation of JEV and BVDV Clearance During the Purification of Recombinant HPV-16 L1 Virus-Like Particles.
Jung Yun CHOI ; Hye Sung JEONG ; Young Lim KIM ; Hwa Kyung SON ; Byoung Guk KIM ; Seung Rel RYU ; Jin Ho SHIN ; Sun Young BAEK ; Hong Ki MIN ; Sue Nie PARK
Journal of Bacteriology and Virology 2004;34(3):213-221
Insect cell-derived biotechnological products have a potential for viral contamination from cell line sources themselves or from adventitious introduction of virus during production. The objective of this study was to establish techniques for viral clearance validation of insect cell-derived recombinant human papillomavirus (HPV)-16 type L1 virus-like particles (VLPs) using Japanese encephalitis virus (JEV) and bovine viral diarrhea virus (BVDV) as relevant viruses. The downstream process for the production of recombinant HPV-16 L1 VLPs was sequentially carried out employing detergent lysis (NP-40/PBS), sonication, sucrose cushion centrifugation, and cesium chloride (CsCl) equilibrium density centrifugation. Recombinant HPV-16 L1 capsid protein (56 kD) expressed in Sf9 cell culture was clearly detected by SDS-PAGE and Western blotting analysis. Each purification step was evaluated to determine reduction factor for viral clearance by infectivity assay. In individual purification steps, detergent treatment (0.50% v/v, NP-40/PBS) and CsCl equilibrium density centrifugation were found to be effective in JEV and BVDV clearance. Overall cumulative reduction factors of JEV and BVDV infectivity titer for the purification procedure implemented in this study were 12.53 and 10.05 log TCID(50)/pool, respectively. The results suggest that the purification procedure employed in this study for the HPV-16 L1 VLPs produced from recombinant baculovirus-infected Sf9 cells will be effective over 10 log TCID(50)/pool reduction factor in the clearance of enveloped, adventitious viruses with a buoyant density lower than approximately 1.23 g/ml.
Blotting, Western
;
Capsid Proteins
;
Cell Line
;
Centrifugation
;
Cesium
;
Detergents
;
Diarrhea
;
Electrophoresis, Polyacrylamide Gel
;
Encephalitis Virus, Japanese
;
Human papillomavirus 16*
;
Humans
;
Insects
;
Sf9 Cells
;
Sonication
;
Sucrose
2.Development of One-step Real-time Reverse Transcription-polymerase Chain Reaction in Combination with Automated RNA Extraction for Detection and Quantitation of Hepatitis A Virus.
Byoung Guk KIM ; Hye Sung JEONG ; Sun Young BAEK ; Jin Ho SHIN ; Jae Ok KIM ; Kyung Il MIN ; Seung Rel RYU ; Bok Soon MIN ; Do Keun KIM ; Mi Kyung PARK ; Mi Jin AHN ; Seok Ho LEE ; Sue Nie PARK
Journal of Bacteriology and Virology 2003;33(3):209-218
One-step real-time reverse transcription-polymerase chain reaction (RT-PCR) assay using the MagNA Pure LC and LightCycler(TM) system was developed and validated for the detection and quantitation of hepatitis A virus (HAV) RNA. The assay was evaluated using in-house synthetic HAV RNA standard. The real-time RT-PCR assay could quantitate a dynamic range of HAV RNA standard between 10(2) and 10(8) copies per reaction. The regression coefficient of the standard curve was an 0.99. The detection limit of the assay was 31.3 RNA copies per reaction. The coefficient variations (CVs) of the assay in combination with automated RNA extraction were less than 1.91% in both intra- and inter-assay. The real-time RT-PCR assay for quantitative detection of HAV would serve a useful method for improving the safety of biological products.
Biological Products
;
Hepatitis A virus*
;
Hepatitis A*
;
Hepatitis*
;
Limit of Detection
;
RNA*
3.Evaluation of Limit of Detection and Range of Quantitation for RT-PCR, Real-Time RT-PCR and RT-PCR-ELISA Detection of Bovine Viral Diarrhoea Virus Contamination in Biologics Derived from Cell Cultures.
Seung Rel RYU ; Jin Ho SHIN ; Sun Young BAEK ; Jae Ok KIM ; Kyung Il MIN ; Bok Soon MIN ; Byoung Guk KIM ; Do Keun KIM ; Mi Kyung PARK ; Mi Jin AHN ; Kyung Sook CHAE ; Hye Sung JEONG ; Seok Ho LEE ; Sue Nie PARK
Journal of Bacteriology and Virology 2003;33(2):161-168
Risk of viral contamination is one of major concerns common to all biologics derived from cultivated cells. Bovine viral diarrhoea virus (BVDV) has widely been known as a contaminant of cell culture-derived vaccines. The objective of the study was to assess the limit of detection and range of quantitation of the detection methods for BVDV using a reverse transcription-polymerase chain reaction (RT-PCR) assay, real-time RT-PCR assay, and RT-PCR-ELISA. One milliliter of cell culture supernatant containing 106.5+/-0.2 median tissue culture infectious dose (TCID50)/ml of BVDV NADL strain was subjected to RNA isolation. The isolated RNA was 10-fold serially diluted and each diluted sample (10-1 to 10-6) was subjected to RT-PCR on a GeneAmpR PCR System 9700 and/or LightCycler(TM). The amplified products were analyzedly (1) agarose gel electrophoresis for RT-PCR assay, (2) melting curve analysis for real-time RT-PCR assay (in this case a program is automatically linked to amplification step), and (3) ELISA using capture and detection probes for RT-PCR-ELISA. The limit of detection of the 3 assay methods was equally estimated to be 316 TCID50/ml of starting virus culture supernatant subjected to the assay. The quantitation range of real-time RT-PCR assay and RT-PCR-ELISA was estimated to be from 3.16x105 to 3.16x102 TCID50/ml of starting virus culture supernatant. The overall results suggested that the 3 assay methods for BVDV detection can be reliably applied to evaluate BVDV contamination in biologics derived from cell cultures.
Biological Products*
;
Cell Culture Techniques*
;
Electrophoresis, Agar Gel
;
Enzyme-Linked Immunosorbent Assay
;
Freezing
;
Limit of Detection*
;
Polymerase Chain Reaction
;
Reverse Transcription
;
RNA
;
Vaccines
4.Construction of A Stable Full-Length cDNA Clone of Japanese Encephalitis Virus Strain SA14-14-2 Using Low Copy Number Plasmid.
Kyung Il MIN ; Young Min KIM ; Mi Sung CHOO ; Sun Young BAEK ; Jae Ok KIM ; Seung Rel RYU ; Bok Soon MIN ; Yeonhee KIM ; Mi Kyung PARK ; Woo Hyeon BYEON ; Sook Jin HUR
Journal of Bacteriology and Virology 2004;34(4):339-353
Recently the reverse genetics system contributed to the progresses in the investigation of positive-stranded RNA viruses. Here, we report the successful construction of a stable full-length infectious cDNA clone of the live attenuated JEV vaccine strain SA14-14-2. The eleven kilobase viral RNA genome was reverse transcribed, amplified as four overlapping DNA fragments and successively ligated into the low copy number plasmid pACYC184, which contains the p15A origin of replication. In vitro-transcribed RNAs had a specific infectivity of approximately 104 PFU/microgram RNA, and the resulting virus exhibited growth kinetics and plaque morphology similar to the parental virus in cell culture. The structural and functional integrity of the cDNA clone was stably maintained even after at least 150 generations in Escherichia coli strain TOP10. The cDNA clone was engineered to contain single nucleotide change to create a XhoI site and knock out a XbaI site (A to C at nt 9134) acting as a genetic marker. This genetic marker was retained in the recovered progeny virus. Our results suggest that the instability of the full-length infectious JEV cDNA clone can be overcome by employing low copy number plasmid pACYC184. This infectious JEV cDNA clone will aid future studies of pathogenesis, virulence, and replication. Furthermore, it will facilitate the development of SA14-14-2 based recombinant vaccines.
Asian Continental Ancestry Group*
;
Cell Culture Techniques
;
Clone Cells*
;
DNA
;
DNA, Complementary*
;
Encephalitis Virus, Japanese*
;
Encephalitis, Japanese*
;
Escherichia coli
;
Family Characteristics
;
Genetic Markers
;
Genome
;
Humans
;
Kinetics
;
Parents
;
Plasmids*
;
Replication Origin
;
Reverse Genetics
;
RNA
;
RNA Viruses
;
RNA, Viral
;
Vaccines, Synthetic
;
Virulence
5.Construction of A Stable Full-Length cDNA Clone of Japanese Encephalitis Virus Strain SA14-14-2 Using Low Copy Number Plasmid.
Kyung Il MIN ; Young Min KIM ; Mi Sung CHOO ; Sun Young BAEK ; Jae Ok KIM ; Seung Rel RYU ; Bok Soon MIN ; Yeonhee KIM ; Mi Kyung PARK ; Woo Hyeon BYEON ; Sook Jin HUR
Journal of Bacteriology and Virology 2004;34(4):339-353
Recently the reverse genetics system contributed to the progresses in the investigation of positive-stranded RNA viruses. Here, we report the successful construction of a stable full-length infectious cDNA clone of the live attenuated JEV vaccine strain SA14-14-2. The eleven kilobase viral RNA genome was reverse transcribed, amplified as four overlapping DNA fragments and successively ligated into the low copy number plasmid pACYC184, which contains the p15A origin of replication. In vitro-transcribed RNAs had a specific infectivity of approximately 104 PFU/microgram RNA, and the resulting virus exhibited growth kinetics and plaque morphology similar to the parental virus in cell culture. The structural and functional integrity of the cDNA clone was stably maintained even after at least 150 generations in Escherichia coli strain TOP10. The cDNA clone was engineered to contain single nucleotide change to create a XhoI site and knock out a XbaI site (A to C at nt 9134) acting as a genetic marker. This genetic marker was retained in the recovered progeny virus. Our results suggest that the instability of the full-length infectious JEV cDNA clone can be overcome by employing low copy number plasmid pACYC184. This infectious JEV cDNA clone will aid future studies of pathogenesis, virulence, and replication. Furthermore, it will facilitate the development of SA14-14-2 based recombinant vaccines.
Asian Continental Ancestry Group*
;
Cell Culture Techniques
;
Clone Cells*
;
DNA
;
DNA, Complementary*
;
Encephalitis Virus, Japanese*
;
Encephalitis, Japanese*
;
Escherichia coli
;
Family Characteristics
;
Genetic Markers
;
Genome
;
Humans
;
Kinetics
;
Parents
;
Plasmids*
;
Replication Origin
;
Reverse Genetics
;
RNA
;
RNA Viruses
;
RNA, Viral
;
Vaccines, Synthetic
;
Virulence
6.A Quantitative Assay of Japanese Encephalitis Virus as a Model Virus for Viral Clearance Validation in Insect Cell-Derived Biotechnology Products.
Hye Sung JEONG ; Young Nam PARK ; Jung Yun CHOI ; Young Lim KIM ; Byoung Guk KIM ; Seung Rel RYU ; Jin Ho SHIN ; Sun Young BAEK ; Seok Ho LEE ; Sue Nie PARK
Journal of Bacteriology and Virology 2002;32(2):187-194
Commercial interests towards insect cell cultures have greatly been increased recently, in part due to the widespread use of insect virus-based vectors for efficient expressions of foreign proteins. Insect cell-derived biotechnology products should be free of adventitious agents such as arboviruses and mycoplasmas. The objective of this study was to establish techniques for the viral safety evaluation of insect cell-derived biotechnology products using Japanese encephalitis virus (JEV) as a model, since JEV is a member of arthropod-borne flaviviruses which has been known to be infectious to insect cells such as Sf9 cells. Quantitative assays for viral infectivity, concentrations of an antigen or a genome are a prerequisite for the studies of viral clearance validation. Here, we report the development of a quantitative assay for JEV RNA using real-time reverse transcription-polymerase chain reaction (RT-PCR). The assay was performed using LightCycler and RNA amplification kit SYBR Green I. Viral RNA extracted from stock suspension of JEV with known infectivity titer was made to 10-fold serial dilution, and each dilution was subjected to the assay for the generation of a standard curve. A JEV specific primer was selected from 3' untranslated region with the expected band size of 323 base pairs. The real-time RT-PCR assay resulted in a successful amplification within 5 log dilution ranges of JEV RNA samples, and the sensitivity of the assay was calculated to be approximately 15 TCID50 per reaction. Highly reproducible standard curves were obtained from experiments performed on three different days. The real-time RT-PCR assay for the quantification of JEV will be an efficient alternative tool for viral clearance validation studies of insect cell-derived biotechnology products.
3' Untranslated Regions
;
Arboviruses
;
Asian Continental Ancestry Group*
;
Base Pairing
;
Biotechnology*
;
Cell Culture Techniques
;
Encephalitis Virus, Japanese*
;
Encephalitis, Japanese*
;
Flavivirus
;
Genome
;
Humans
;
Insects*
;
Mycoplasma
;
RNA
;
RNA, Viral
;
Sf9 Cells