1.Detection of free DNA septin 9 gene methylation in plasma.
Zhi LUO ; Yingbin HU ; Xiaoyun PU
Journal of Central South University(Medical Sciences) 2021;46(2):127-134
OBJECTIVES:
To explore the correlation between cytosine-phosphoric-guanylic (CpG) site of Septin 9 gene and colorectal cancer, and to develop a real-time PCR detection system in plasma in patients with colorectal cancer.
METHODS:
The methylation of training samples was detected by high-throughput sequencing technology, and the sites highly consistent with the clinical information of colorectal cancer were identified. Then the detection system of real-time PCR was designed to analyze the consistency of plasma and tissue based on methylationa sensitive enzyme digestion. Finally, 100 clinical trials were conducted to evaluate the performance of the detection system with the methylation sensitive enzyme digestion-real-time PCR.
RESULTS:
The highly consistent sites, which were selected by high-throughput sequencing from 71 training set samples, was the 38th CpG. Based on the detection region, the screened methylation sensitive enzymes were
CONCLUSIONS
The 38th CpG site of Septin 9 detected by the detection system of methylation sensitive enzyme digestion-real-time PCR can highly predict the occurrence of colorectal cancer with great clinical application value.
Colorectal Neoplasms/genetics*
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CpG Islands/genetics*
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DNA
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DNA Methylation
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Humans
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Plasma/metabolism*
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Septins/metabolism*
2.Update of asthenospermia-related genes and proteins.
Qi-zhao ZHOU ; Chun-qiong FENG ; Xiang-ming MAO
National Journal of Andrology 2009;15(9):836-839
One of the most common causes of male infertility is asthenospermia, whose pathogenesis, however, is not yet clear. Recent researches have found that some genes (such as tektin-2, DNAI1, DNAH5, DNAH11, AKAP4, SEPT4 and Smcp) and proteins (such as sperm proteins ACTB, ANXA5, PRM1, PRM2 and SABP and seminal proteins Tf, PSA, PAP and Fractalkine) are associated with asthenospermia. The finding of these molecular markers has provided a base for the explanation of the molecular mechanism of asthenospermia, and these markers may become the diagnostic and therapeutic targets of the disease.
A Kinase Anchor Proteins
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genetics
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Animals
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Asthenozoospermia
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genetics
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metabolism
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Cytoskeletal Proteins
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genetics
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DNA Methylation
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genetics
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GTP Phosphohydrolases
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genetics
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Humans
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Male
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Mutation
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Septins
3.An observation of the effects of the truncated septin2 on mouse epidermal cell and fibroblast.
Jun ZHANG ; Sheng-Jian TANG ; Xiao-Ke WANG ; Xiao-Qin LIANG ; Wen-Juan SUN
Chinese Journal of Plastic Surgery 2007;23(2):147-150
OBJECTIVETo construct eukaryotic expression vector of the truncated septin2 and investigate the influence on the cultured mouse epidermal cell and fibroblast in vitro exerted by the transgenic expression product.
METHODSThe short splicing fragment was obtained by amplifying the reverse transcription product of the fetal mouse skin mRNA with PCR. Then its recombinant expression vector pcDNA3.1 (-)/septin2s was constructed and used to transfect the mouse epidermal cell and fibroblast cultured in vitro. The expression of the foreign gene was detected with RT-PCR and the changes of cell proliferation were observed and analysed.
RESULTSRT-PCR results indicated that pcDNA3.1/septin2 was expressed in the cultured mouse epidermal cells and fibroblasts in vitro. We found that the epidermal cells accelerated their reproduction, but the fibroblasts had no obvious changes.
CONCLUSIONWe successfully constructed eukaryotic expressive vectors of pcDNA3.1/ septin2s and transfected it into mouse epidermal cells and fibroblasts in vitro. The results settle a basis for showing effect of septin2s on fetal mouse skin.
Animals ; Cell Line ; Cytoskeletal Proteins ; genetics ; DNA, Recombinant ; Epithelial Cells ; cytology ; Fibroblasts ; cytology ; GTP-Binding Proteins ; genetics ; Genetic Vectors ; Mice ; Mice, Inbred BALB C ; Septins ; Skin ; cytology ; Transfection
4.Influence of SEPT7 on biological characters of glioma cell line TJ905.
Zhi-Fan JIA ; Pei-Yu PU ; Chun-Sheng KANG ; Guang-Xiu WANG ; Zhi-Yong ZHANG ; Ming-Zhe QIU ; Qiang HUANG
Chinese Journal of Surgery 2007;45(20):1420-1423
OBJECTIVETo investigate the influence of SEPT7 on biological characters of gliomas cells TJ905.
METHODSRecombinant SEPT7 constructs was transfected to human glioblastoma cell line TJ905 in which SEPT7 expression is absent. The positive clones were identified by RT-PCR and Western blot analysis. The cell proliferation was determined by MTT assay and flow cytometry, cell apoptosis was detected with Annexin V staining and cell invasion was evaluated by motility in three-dimensional culture. Moreover, the molecules regulating the cell cycle progression were examined by immunofluorescence staining and Western blot analysis.
RESULTSWhen SEPT7 was successfully transfected to TJ905 cells, the cell proliferation activity of TJ905 cell was inhibited, the cell cycle was arrested in G0/G1 phase and S phase fraction (SPF) was lowered, the positive regulatory molecules for cell cycle progression including cyclin D1, CDk4, cyclin E and CDk2 were downregulated while the negative modulators including p16 and p21 were upregulated, apoptotic cells were increased and cell invasive ability was attenuated.
CONCLUSIONSTransfection of SEPT7 construct into the glioma cells TJ905 is able to inhibit the proliferation activity and invasive ability of TJ905 cell and to induce cell apoptosis. These results revealed that SEPT7 exerted the suppressive effect on the glioma cell growth and invasion, and induced apoptosis, and suggested that SEPT7 as a gene of glioma suppressor.
Apoptosis ; Blotting, Western ; Brain Neoplasms ; genetics ; metabolism ; pathology ; Cell Cycle ; Cell Cycle Proteins ; genetics ; metabolism ; physiology ; Cell Line, Tumor ; Cell Proliferation ; Cell Survival ; Flow Cytometry ; Fluorescent Antibody Technique ; Glioma ; genetics ; metabolism ; pathology ; Humans ; Reverse Transcriptase Polymerase Chain Reaction ; Septins ; Transfection
5.Preliminary analysis of differentially expressed proteins of clear-cell renal cell carcinoma by comparative proteomic technologies.
Jin YANG ; Xu LI ; Mei-juan TIAN ; Li-na WANG ; Ting-ting CHENG ; Wei CHEN
Chinese Journal of Oncology 2012;34(8):571-576
OBJECTIVETo explore the different expression of proteins between human clear-cell renal cell carcinoma (ccRCC) cell line RLC-310 and normal renal proximal tubule epithelial cell line HK-2, and to search new differentially expressed proteins of RCC.
METHODSRLC-310 and HK-2 cells were cultured in vitro. The total proteins were separated by ProteomeLab PF 2D protein fractionation system and the differential expression protein fractions of the two cell lines were analyzed and identified by capillary liquid chromatography-electrospray ionization-mass spectrometry (LC-ESI-MS/MS). RT-PCR and Western blot were used to confirm the representative differential expression at mRNA and protein levels.
RESULTSOne hundred and ninty-six differentially expressed proteins were identified. These differentially expressed proteins involved in many aspects, including cell proliferation and anti-apoptosis, energy metabolism, mitochondria reduction and oxidation, oxidative stress and resistance, cell signaling, invasion and adhesion, cytoskeleton and motion, neovascularization, etc. Except for previously reported RCC associated proteins: annexin A2, fatty acid-binding protein, vimentin, fibronectin, and so on, Septin-9 was firstly found highly expressed in RLC-310 cells when compared with that in the HK-2 cells. Moreover, the overexpression of Septin-9 was confirmed by RT-PCR and Western blot analysis at both mRNA and protein levels (P < 0.05).
CONCLUSIONSThe human ccRCC cell line RLC-310 cells display differential protein profiles compared with those of the normal renal cell line HK-2 cells. The identified differential expression proteins are involved in many aspects of RCC development. It is worth further study and elucidate the molecular mechanisms of RCC. The representative differential protein Septin-9 deserves further study its role in the angiogenesis of ccRCC.
Carcinoma, Renal Cell ; metabolism ; pathology ; Cell Line ; Cell Line, Tumor ; Epithelial Cells ; cytology ; metabolism ; Gene Expression Profiling ; Gene Expression Regulation, Neoplastic ; Humans ; Kidney Neoplasms ; metabolism ; pathology ; Kidney Tubules, Proximal ; cytology ; Proteomics ; methods ; RNA, Messenger ; metabolism ; Septins ; genetics ; metabolism
6.MLL-SEPT5 Fusion Transcript in Two de novo Acute Myeloid Leukemia Patients With t(11;22)(q23;q11).
Nana WANG ; Xiaojin WU ; Guangying SHENG ; Liang MA ; Lijun WEN ; Hong YAO ; Suning CHEN
Annals of Laboratory Medicine 2016;36(5):501-503
No abstract available.
Base Sequence
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Cell Cycle Proteins/*genetics
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Chromosomes, Human, Pair 11
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Chromosomes, Human, Pair 22
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Female
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Gene Rearrangement
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Histone-Lysine N-Methyltransferase/*genetics
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Humans
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Immunophenotyping
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In Situ Hybridization, Fluorescence
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Karyotype
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Leukemia, Myeloid, Acute/*diagnosis/metabolism
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Male
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Myeloid-Lymphoid Leukemia Protein/*genetics
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Oncogene Proteins, Fusion/genetics
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Reverse Transcriptase Polymerase Chain Reaction
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Septins/*genetics
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Sequence Analysis, DNA
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Translocation, Genetic
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Young Adult
7.Study on the anti-invasion effect of SEPT7 gene for U251MG glioma cell in vitro.
Song XU ; Zhi-fan JIA ; Qiang HUANG ; Chunsheng KANG ; Guang-xiu WANG ; An-ling ZHANG ; Xiao-zhi LIU ; Xuan ZHOU ; Peng XU ; Pei-yu PU
Chinese Journal of Medical Genetics 2008;25(3):262-267
OBJECTIVETo study the anti-invasion effect of SEPT7 gene on U251MG glioma cells and its possible molecular mechanism.
METHODSRecombinant adenovirus vector carrying SEPT7 gene (rAd5-SEPT7) was transduced to human glioma cell line U251MG, and empty adenovirus vector was used as control. Tumor invasion was examined by Transwell method and 3 D-Matrigel assay, and tumor cell migration by wound-healing method and 2 D-Matrigel assay. Three major molecular events associated with cell motility and migration, including changes of expression in MMP2, MMP9, MT1-MMP, TIMP1 and TIMP2, the alteration of integrin alpha(v)beta(3) expression, and the structural change of cytoskeleton protein, tubulin-alpha, in U251 cells transduced with rAd5-SEPT7 were studied by Western blotting, immunofluorescence and laser scanning confocal microscope, respectively.
RESULTSThe invasive and migratory capabilities of cells transduced with rAd5-SEPT7 were inhibited. The expression of extracellular matrix metalloproteinases MMP-2, MMP-9, MT1-MMP and integrin alpha(v)beta(3) was significantly decreased, while the expression of matrix metalloproteinase inhibitor TIMP1, TIMP2 was upregulated. Intracellular cytoskeleton protein-tubulin-alpha in U251 cells exhibited prominent morphological changes which including the appearance of distortion and aggregation resulting from redistribution of tubulin-alpha, and this feature of alteration was similar to the tubulin-alpha structure in normal non-tumor cells.
CONCLUSIONSEPT7 gene can inhibit the invasion and migration ability of U251 glioma cells. Its molecular mechanism may include that SEPT7 gene reverses the imbalanced state of MMPs/TIMPs, downregulates the expression of integrin alpha(v)beta(3) and alters the structure of tubulin-alpha of U251MG glioma cells. It is suggested that SEPT7 gene could be a good candidate for gene therapy of gliomas.
Adenoviridae ; genetics ; Blotting, Western ; Cell Cycle Proteins ; genetics ; physiology ; Cell Line, Tumor ; Cell Movement ; genetics ; Genetic Vectors ; genetics ; Glioma ; metabolism ; pathology ; Humans ; Integrin alphaVbeta3 ; metabolism ; Matrix Metalloproteinase 14 ; metabolism ; Matrix Metalloproteinase 2 ; metabolism ; Matrix Metalloproteinase 9 ; metabolism ; Microscopy, Confocal ; Neoplasm Invasiveness ; genetics ; Septins ; Tissue Inhibitor of Metalloproteinase-1 ; metabolism ; Tissue Inhibitor of Metalloproteinase-2 ; metabolism