1.Relationship among the Expression of Cyclin D1, p21, and p53 Protein, and Prognosis in Non-Small Cell Lung Carcinomas.
Seok Woo YANG ; Sang Ho CHO ; Woo Ick YANG ; Woo Hee JUNG ; Chul Min AHN ; Doo Yun LEE
Korean Journal of Pathology 1999;33(12):1120-1130
Recently, cell cycle regulators have been suggested as new prognostic factors of the lung cancer. In this study, we evaluated the expression of cyclin D1, p21, and p53 using the X2-test, with regard to the stage of the patients, histologic type, and histologic differentiation in the 135 cases of non-small cell lung carcinomas (NSCLC). To evaluate the confounding effects among cyclin D1, p21, and p53 on X2-test analysis, we used the Mantel-Haenzel test. The NSCLC in this study included 82 cases of squamous cell carcinoma and 53 cases of adenocarcinoma. Each nuclear staining of cyclin D1, p21, and p53 was observed in 65 cases (48.1%), in 54 cases (40.0%), and in 81 cases (60.0%) of NSCLCs, respectively. Only p53 expression was significantly associated with the stage (stage I, II, IIIa) (p<0.05) and squamous cell carcinoma (p<0.05). On the other hand, cyclin D1 expression was significantly associated with the histologic differentiation. The confounding effects among cyclin D1, p21, and p53 revealed that only p21 expression changed the relationship between p53 and stage. In this regard, further study is needed.
Adenocarcinoma
;
Carcinoma, Squamous Cell
;
Cell Cycle
;
Cyclin D1*
;
Cyclins*
;
Hand
;
Humans
;
Lung Neoplasms
;
Lung*
;
Prognosis*
2.Sequence Generation and Genotyping of 15 Autosomal STR Markers Using Next Generation Sequencing.
Eun Hye KIM ; Sang Eun JUNG ; Kyoung Jin SHIN ; Woo Ick YANG ; In Seok YANG
Korean Journal of Legal Medicine 2014;38(2):48-58
Recently, next generation sequencing (NGS) has received attention as the ultimate genotyping method to overcome the limitations of capillary electrophoresis (CE)-based short tandem repeat (STR) analysis, such as the limited number of STR loci that can be measured simultaneously using fluorescent-labeled primers and the maximum size of STR amplicons. In this study, we analyzed 15 autosomal STR markers via the NGS method and evaluated their effectiveness in STR analysis. Using male and female standard DNA as single-sources and their 1:1 mixture, we sequentially generated sample amplicons by the multiplex polymerase chain reaction (PCR) method, constructed DNA libraries by ligation of adapters with a multiplex identifier (MID), and sequenced DNA using the Roche GS Junior Platform. Sequencing data for each sample were analyzed via alignment with pre-built reference sequences. Most STR alleles could be determined by applying a coverage threshold of 20% for the two single-sources and 10% for the 1:1 mixture. The structure of the STR in each allele was accurately determined by examining the sequences of the target STR region. The mixture ratio of the mixed sample was estimated by analyzing the coverage ratios between assigned alleles at each locus and the reference/variant ratios from the observed sequence variations. In conclusion, the experimental method used in this study allowed the successful generation of NGS data. In addition, the NGS data analysis protocol enables accurate STR allele call and repeat structure determination at each locus. Therefore, this approach using the NGS system will be helpful to interpret and analysis the STR profiles from singe-source and even mixed samples in forensic investigation.
Alleles
;
DNA
;
Electrophoresis, Capillary
;
Female
;
Gene Library
;
Humans
;
Ligation
;
Male
;
Microsatellite Repeats
;
Multiplex Polymerase Chain Reaction
;
Statistics as Topic
3.Analysis of Kinship Index Distributions in Koreans Using Simulated Autosomal STR Profiles.
In Seok YANG ; Hwan Young LEE ; Su Jeong PARK ; Woo Ick YANG ; Kyoung Jin SHIN
Korean Journal of Legal Medicine 2013;37(2):57-65
Kinship testing in forensic casework is largely based on a likelihood ratio (LR) approach with short tandem repeat (STR) markers; however, in order to efficiently identify potential relatives in a specific population, the threshold values for kinship prediction should be determined by analyzing the kinship index distributions of the population in question. In this study, 250,000 DNA profiles were simulated using allele frequencies at 20 autosomal STR loci in Koreans, then the LRs were calculated for true close relatives and unrelated pairs. The LR distributions in related and unrelated pairs under a given relationship were compared in 2 sets of 13 Combined DNA Index System (CODIS) and 20 STR profiles. Using 13 CODIS STRs, true relatives in parent/child and full-sibling relationships were sufficiently discriminated from unrelated pairs with LR thresholds of 1,000 and 100, respectively. However, the CODIS STRs lacked the discriminatory power to differentiate between related and unrelated pairs in uncle/nephew and first cousin relationships due to high false-positive and false-negative rates with a LR threshold of 10. Increasing the number of STR loci to 20 increased discrimination of close relatives, but high false results remained in uncle/nephew and first cousin relationships. The kinship index data from this study will help make decisions on various kinship testing and familial searching in Koreans.
Asian Continental Ancestry Group
;
Discrimination (Psychology)
;
DNA
;
Gene Frequency
;
Humans
;
Microsatellite Repeats
4.A Inflammed Plantar Epidermal Cyst Misdiagnosed as Secondary Infection of Calluses.
Yoon Seok YANG ; Soeun PARK ; Soo Jung SHIN ; Chang Sun YOO ; Chul Woo KIM ; Sang Seok KIM
Korean Journal of Dermatology 2014;52(2):153-154
No abstract available.
Bony Callus*
;
Coinfection*
;
Epidermal Cyst*
5.Morphological studies on recombinant virus(recB-8) selected by coinfection of the baculoviruses bombyx mori and autographa californica nuclear palyhedrosis viruses.
Ji Hyun] PARK ; Soo Dong WOO ; Beom Seok PKR ; Kang Sun PYU ; Jai Myung YANG ; In Shik CHUNG ; Seok Kwon KANG
Journal of the Korean Society of Virology 1993;23(1):95-104
No abstract available.
Baculoviridae*
;
Bombyx*
;
Coinfection*
6.Diffusion Metrics as a Potential Prognostic Biomarker in Cervical Myelopathy
Hea Eun YANG ; Seok Woo KIM ; Woo Kyoung YOO
Brain & Neurorehabilitation 2019;12(1):e1-
Diffusion tensor imaging (DTI) has a diagnostic value in cervical myelopathy. The usefulness of diffusion metrics as a potential prognostic biomarker was assessed in this review. Various diffusion metrics, such as fractional anisotropy, mean diffusivity, apparent diffusion coefficient, and radial diffusivity, were significant in correlation with functional recovery after surgery. Changes in diffusion metrics not only at the compression level, but also above and below the compression level were confirmed. However, it was difficult to confirm the results owing to the diversity of studies. Further efforts to make a consensus on spinal cord DTI are needed.
Anisotropy
;
Consensus
;
Diffusion Tensor Imaging
;
Diffusion
;
Recovery of Function
;
Spinal Cord
;
Spinal Cord Diseases
7.Ectopic Implantation of Chorionic Villi presenting as Hemorrhagic Vaginal Mass associated with Second Trimester of Normal Pregnancy.
Jin Woo SHIN ; Yong Ho LEE ; Yang Seok CHAE ; Young Tae KIM ; Kyu Wan LEE
Korean Journal of Obstetrics and Gynecology 2000;43(7):1243-1245
Although a lot of articles examining concomitant intrauterine and ectopic pregnancy have been presented, we have not found any reports on ectopic implantation of chorionic villi in the vagina with normal intrauterine pregnancy. We experienced a case of chorionic villi on the vaginal wall as a hemorrhagic mass during the second trimester of pregnancy. A pregnant woman (gestational age of 16 weeks and 1 day) visited our hospital due to vaginal bleeding. There was no abnormal finding except vaginal hemorrhagic mass, and the mass revealed a product of conception.
Chorion*
;
Chorionic Villi*
;
Female
;
Fertilization
;
Humans
;
Pregnancy
;
Pregnancy Trimester, Second*
;
Pregnancy*
;
Pregnancy, Ectopic
;
Pregnant Women
;
Uterine Hemorrhage
;
Vagina
8.Solid pseudopapillary tumor with hepatic metastasis.
Woo Seok NAM ; Yong Sung WON ; Dong Do YOU ; Jin Mo YANG ; Jee Han JUNG
Journal of the Korean Surgical Society 2011;81(Suppl 1):S55-S58
Solid pseudopapillary tumor of the pancreas is a rare tumor that affects young females with low malignant potential and good prognosis with more than 90% survival at 5 years. Metastasis is very rare. We report the case of a 74-year-old female who had pancreatic solid-pseudopapillary tumor and synchronous hepatic metastasis.
Aged
;
Female
;
Humans
;
Neoplasm Metastasis
;
Pancreas
;
Pancreatic Neoplasms
;
Prognosis
9.CT Appearance of Internal Hernia:Whorling Sign of Mesentery and Mesenteric Vessels.
Tae Hun KIM ; Won Ho KIM ; Geun Seok YANG ; Sung Woo KIM ; Duk Sik KANG
Journal of the Korean Radiological Society 1995;32(2):297-302
PURPOSE: To evaluate CT findings of internal hernia. MATERIALS AND METHODS: Three patients with internal hernia had abdominal CT scans and two of them had small bowel follow through examinations. The CT features of two patients with retroanastomotic and one patient with left paraduodenal hernia were evaluated and correlated with small bowel follow through examinations, and surgical findings. Two patients with retroanastomotic hernia had a history of subtotal gastrectomy with antecolic gastrojejunostomy. The diagnosis of internal hernia was made on the basis of surgical find ings in two patients of retroanastomotic hernia, and characteristic barium study findings in one patient of left paraduodenal hernia. RESULTS: The small bowel follow through examination showed small bowel loops gathered in a circumscribed mass in the left mid abdomen, and delay in passage through these loops. In case of left paraduodenal hernia, abrupt narrowing of the distal duodenum could be identified. The characteristic CT findings of all three patients were whorling of the mesentery and mesenteric vessels in the left mid-abdomen. In the patient with left paraduodenal hernia, after resolution of the gastrointestinal symptoms, a follow-up CT scan showed spontaneous disappearance of whorling of the mesentery and mesenteric vessels suggesting spontaneous resolution of the hernia. In the other two cases, upon exploration of the abdomen, dilatation of afferent duodenum caused by adhesion between ligament of Treitz and adjacent bowel walls, and retro- anastomotic herniation of the efferent loops were found. CONCLUSION: The usual diagnosis of internal hernia is based on the appearance of the small bowel follow through examination. However, we consider that the whorling appearance(we call it whorling sign) of the mesentery and mesenteric vessels on CT scan is also suggestive of internal hernia in patients under clinical suspicion.
Abdomen
;
Barium
;
Diagnosis
;
Dilatation
;
Duodenum
;
Follow-Up Studies
;
Gastrectomy
;
Gastric Bypass
;
Hernia
;
Humans
;
Ligaments
;
Mesentery*
;
Tomography, X-Ray Computed
10.Radiologic Findings of the Anthrax: Focus on Alimentary Anthrax.
Tae Hun KIM ; Duk Sik KANG ; Won Ho KIM ; Geun Seok YANG ; Sung Woo KIM
Journal of the Korean Radiological Society 1995;33(4):599-603
PURPOSE: To evaluate the radiologic findings of alimentary anthrax. MATERIALS AND METHODS: 19 patients with alimentary anthrax, which was caused by ingestion of contaminated beef, were included in this study. The diagnosis was made .b.y demonstration of Bacillus anthracis in smear and culture of the contaminated meat. We evaluated the clinical manifestations and the findings of thoracic, abdominal radiographs, cervical, abdominal ultrasonograms and abdominal CT scans. RESULTS: Out of the 19 patients with the alimentary infection, 9 had oropharyngeal form, 18 had abdominal form and 8 had combination of oropharyngeal and abdominal form. The patients had general symptoms and signs such as fever, chill, myalgia. Clinical symptoms and signs were sore throat, throat injection, throat ulcer and patch in oropharyngeal form, and nausea, vomiting, abdominal pain, diarrhea, and gross GI bleeding in abdominal form. Radiologic findings included enlarged cervical lymph nodes(36%) in oropharyngeal form, and paralytic ileus(26%), ascites(26%), hepatomegaly(21%), enlarged mesenteric lymph nodes(26%), small bowel wall thickening(5%) in abdominal form. In two patients, late complications occurred as intestinal obstruction due to ileal stricture with perforation, and inflammatory changes of pelvic cavity due to ileovesical fistula. CONCLUSION: Radiologic findings of alimentary anthrax are difficult in differentiation from those of other inflammatory bowel disease, but those radiologic findings with clinical manifestations may be helpful in diagnosis and evaluation of disease process in patients with alimentary anthrax.
Abdominal Pain
;
Anthrax*
;
Bacillus anthracis
;
Constriction, Pathologic
;
Diagnosis
;
Diarrhea
;
Eating
;
Fever
;
Fistula
;
Hemorrhage
;
Humans
;
Inflammatory Bowel Diseases
;
Intestinal Obstruction
;
Meat
;
Myalgia
;
Nausea
;
Pharyngitis
;
Pharynx
;
Tomography, X-Ray Computed
;
Ulcer
;
Ultrasonography
;
Vomiting