1.Identification and characterization of DIR gene family in Schisandra chinensis.
Yu-Qing DONG ; Ting-Yan QIANG ; Jiu-Shi LIU ; Bin LI ; Xue-Ping WEI ; Yao-Dong QI ; Hai-Tao LIU ; Ben-Gang ZHANG
China Journal of Chinese Materia Medica 2021;46(20):5270-5277
Dirigent(DIR) proteins are involved in the biosynthesis of lignin, lignans, and gossypol in plants and respond to biotic and abiotic stresses. Based on the full-length transcriptome of Schisandra chinensis, bioinformatics methods were used to preliminarily identify the DIR gene family and analyze the physico-chemical properties, subcellular localization, conserved motifs, phylogeny, and expression patterns of the proteins. The results showed that a total of 34 DIR genes were screened and the encoded proteins were 156-387 aa. The physico-chemical properties of the proteins were different and the secondary structure was mainly random coil. Half of the DIR proteins were located in chloroplast, while the others in extracellular region, endoplasmic reticulum, cytoplasm, etc. Phylogenetic analysis of DIR proteins from S. chinensis and the other 8 species such as Arabidopsis thaliana, Oryza sativa, and Glycine max demonstrated that all DIR proteins were clustered into 5 subfamilies and that DIR proteins from S. chinensis were in 4 subfamilies. DIR-a subfamily has the unique structure of 8 β-sheets, as verified by multiple sequence alignment. Finally, through the analysis of the transcriptome of S. chinensis fruit at different development stages, the expression pattern of DIR was clarified. Combined with the accumulation of lignans in fruits at different stages, DIR might be related to the synthesis of lignans in S. chinensis. This study lays a theoretical basis for exploring the biological functions of DIR genes and elucidating the biosynthesis pathway of lignans in S. chinensis.
Fruit/genetics*
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Lignans/analysis*
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Phylogeny
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Schisandra
;
Sequence Alignment
2.Differences between male and female leaves of Schisandra sphenanthera: based on RNA-Seq.
Jie LI ; Jia-Qi GAO ; Tie-Gui NAN ; Jun-Hui ZHOU ; Zhong-Yi HUA ; Jian YANG ; Chao JIANG ; Lu-Qi HUANG
China Journal of Chinese Materia Medica 2021;46(22):5797-5803
Schisandra sphenanthera is dioecious and only the fruits of female plants can be used as medicine and food. It is of great significance for the cultivation and production of S. sphenanthera to explore the differences between male and female plants at the non-flowering stage and develop the identification markers at non-flowering or seedling stage. In this study, the transcriptome of male and female leaves of S. sphenanthera at the non-flowering stage was sequenced by Illumina high-throughput sequencing technology and analyzed based on bioinformatics. A total of 236 682 transcripts were assembled by Trinity software and 171 588 were chosen as unigenes. Finally, 1 525 differentially expressed genes(DEGs) were identified, with 458 up-regulated and 1 067 down-regulated in female lea-ves. The down-regulated genes mainly involve photosynthesis, photosynthesis-antenna protein, carbon fixation in photosynthetic or-ganisms, and other pathways. Real-time quantitative PCR(qPCR) identified two genes between male and female leaves and one of them was a HVA22-like gene related to floral organ development and abscisic acid(ABA). Enzyme linked immunosorbent assay(ELISA) was applied to determine the content of ABA, auxin, gibberellin, and zeatin riboside(ZR) in leaves of S. sphenanthera. The results showed that the content of ABA and ZR in male leaves was significantly higher than that in female leaves. The involvement of down-regulated genes in female leaves in the photosynthesis pathway and the significant differences in the content of endogenous hormones between male and female leaves lay a scientific basis for analyzing the factors affecting sex differentiation of S. sphenanthera.
Abscisic Acid
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Gene Expression Profiling
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Gene Expression Regulation, Plant
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Plant Leaves/genetics*
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RNA-Seq
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Schisandra
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Transcriptome
3.Molecular cloning and characterization of three phenylalanine ammonia-lyase genes from Schisandra chinensis.
San-Peng FAN ; Wei CHEN ; Jiang-Chun WEI ; Xiao-Xu GAO ; Yong-Cheng YANG ; An-Hua WANG ; Gao-Sheng HU ; Jing-Ming JIA
Chinese Journal of Natural Medicines (English Ed.) 2022;20(7):527-536
Phenylalanine ammonia-lyase (PAL), which catalyzes the conversion from L-phenylalanine to trans-cinnamic acid, is a well-known key enzyme and a connecting step between primary and secondary metabolisms in the phenylpropanoid biosynthetic pathway of plants and microbes. Schisandra chinensis, a woody vine plant belonging to the family of Magnoliaceae, is a rich source of dibenzocyclooctadiene lignans exhibiting potent activity. However, the functional role of PAL in the biosynthesis of lignan is relatively limited, compared with those in lignin and flavonoids biosynthesis. Therefore, it is essential to clone and characterize the PAL genes from this valuable medicinal plant. In this study, molecular cloning and characterization of three PAL genes (ScPAL1-3) from S. chinensis was carried out. ScPALs were cloned using RACE PCR. The sequence analysis of the three ScPALs was carried out to give basic characteristics followed by docking analysis. In order to determine their catalytic activity, recombinant protein was obtained by heterologous expression in pCold-TF vector in Escherichia coli (BL21-DE3), followed by Ni-affinity purification. The catalytic product of the purified recombinant proteins was verified using RP-HPLC through comparing with standard compounds. The optimal temperature, pH value and effects of different metal ions were determined. Vmax, Kcat and Km values were determined under the optimal conditions. The expression of three ScPALs in different tissues was also determined. Our work provided essential information for the function of ScPALs.
Cloning, Molecular
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Escherichia coli/metabolism*
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Phenylalanine/metabolism*
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Phenylalanine Ammonia-Lyase/chemistry*
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Recombinant Proteins
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Schisandra/genetics*
4.Identification of Schisandra sphenanthera and S. chinensis by random amplified polymorphic DNA sequence characterized applied region.
Lijing CHEN ; Xin QI ; Yukun WANG ; Li ZHANG ; Zhifu GUO ; Jingwei LIN ; Yuning SONG ; Ming ZHONG
China Journal of Chinese Materia Medica 2011;36(22):3083-3085
OBJECTIVETo establish a new method for the identification of Schisandra sphenanthera and S. chinensis.
METHODRandom amplified polymorphic DNA-Sequence characterized applied region (RAPD-SCAR) method was applied to screen primers.
RESULTScreening from 100 primers, only 2 random primers, which can be used to identify S. sphenanthera and S. chinensis accurately with a good reproducibility. It worked to fit them into sequence characterized applied region.
CONCLUSIONRAPD-SCAR can be used to identify S. sphenanthera and S. chinensis accurately.
Base Sequence ; Molecular Sequence Data ; Polymerase Chain Reaction ; methods ; Random Amplified Polymorphic DNA Technique ; Schisandra ; genetics ; Sequence Analysis, DNA
5.Identification of Schisandra chinensis with white fruits based on ITS2 sequences.
Xian-Kuan LI ; Bing WANG ; Yan-Chao ZHENG ; Cong LIU ; Pu DING ; Xin SONG
China Journal of Chinese Materia Medica 2014;39(11):2011-2015
OBJECTIVETo analyse a special kind of Schisandra chinensis with the white fruit using ITS2 barcode at molecular levels.
METHODITS2 regions were sequenced bidirectionally. Sequence assembly and consensus sequence generation were performed using the CodonCode Aligner, MEGA 5.0 software was used to align the sequences. The ITS2 secondary structure was predicted using ITS2 web server, BLAST 1 method was used to identify the S. chinensis with the white fruit.
RESULTThe length of the ITS2 sequence was 231 bp. And the sample was identified as S. chinensis using the method of BLAST 1. Their mean interspecific genetic distance (K2P distance) among the populations of the S. chinensis with the white fruit and S. chinensis was far lower than the mean interspecific genetic distance between the S. chinensis and S. sphenanthera.
CONCLUSIONBy using ITS2 the S. chinensis with the white fruit was identified as S. chinensis, and the ITS2 barcode could be used to identify S. chinensis and S. sphenanthera.
DNA, Plant ; chemistry ; genetics ; DNA, Ribosomal Spacer ; chemistry ; genetics ; Fruit ; chemistry ; classification ; genetics ; Molecular Sequence Data ; Nucleic Acid Conformation ; Schisandra ; chemistry ; classification ; genetics ; Sequence Analysis, DNA ; Software
6.DNA identification of Zijingpi's adulterant species Schisandra sphenanthera based on NCBI nucleotide database analysis.
Xiao-li CHENG ; Cai-li LIAO ; Chun-sheng LIU ; Zhen-fang BAI ; Yao-jun YANG ; Jian ZHENG ; Ji ZHANG
China Journal of Chinese Materia Medica 2012;37(17):2534-2537
OBJECTIVETo provide basis for quality control of Zijingpi, DNA identification was used based on NCBI nucleotide database analysis.
METHODFirstly, total DNA of Zijingpi was extracted. Secondly, the ITS sequence was amplified by PCR with universal primer of ITS and PCR products was directly sequenced after purification. Finally, ITS sequence similarity and phylogenetic tree were used for identification.
RESULTThe ITS sequence information of the mainstream commercial drugs of Zijingpi was obtained.
CONCLUSIONIt is firstly reported that the mainstream commercial drugs of Zijingpi was the bark of Schisandra sphenanthera.
DNA, Plant ; genetics ; Databases, Nucleic Acid ; Drugs, Chinese Herbal ; chemistry ; standards ; Molecular Sequence Data ; Phylogeny ; Quality Control ; Schisandra ; classification ; genetics ; Sequence Analysis, DNA
7.Ribosomal DNA ITS sequences analysis of the Chinese crude drug fructus schisandrae sphenantherae and fruts of Schisandra viridis.
Jian-ping GAO ; Yan-han WANG ; Chun-feng QIAO ; Dao-feng CHEN
China Journal of Chinese Materia Medica 2003;28(8):706-710
OBJECTIVETo find the patterns of the rDNA ITS sequence variation of Schisandra sphenanthera and S. viridis, and to establish the molecular biological method for the identification of Fructus Schisandrae Sphenantherae and the fruits of S. viridis.
METHODPCR products were sequenced directly and the sequences were analyzed with PAUP 4.0b10. NJ systematic tree was obtained with neighbor-joining method.
RESULTThe Complete ITS sequence of S. sphenanthera was 691-692 bp, of which there were 282 bp of ITS1 and 246-247 bp of ITS2. The complete sequence of S. viridis was 694-695 bp, consisting of 285-286 bp of ITS1 and 246-247 bp of ITS2. There were three informative sites in ITS1 regions for the two species. In the NJ tree with Kadsura anamosma and K. coccinea as outgroups, five different populations of S. viridis were the monophyletic group with the bootstrap value of 68%. These populations included one from Tianmushan, Zhejiang province, three populations from Jigongshan, Henan Province and the other two populations of S. viridis cited the sequences from GeneBank (registration numbers are AF263438 and AF163703 respectively).
CONCLUSIONThe rDNA internal transcribed spacer is a good marker to distinguish the Fructus Schisandrae Sphenantherae from the fruits of S. viridis.
Base Sequence ; DNA, Plant ; genetics ; DNA, Ribosomal Spacer ; genetics ; Drug Contamination ; Fruit ; genetics ; Molecular Sequence Data ; Phylogeny ; Plants, Medicinal ; classification ; genetics ; RNA, Ribosomal, 5.8S ; genetics ; Schisandra ; classification ; genetics ; Sequence Analysis, DNA
8.Protective effects of extracts of Schisandra chinensis stems against acetaminophen-induced hepatotoxicity via regulation of MAPK and caspase-3 signaling pathways.
Yan-Zi LI ; Zhi-Na MA ; Yin-Shi SUN ; Shen REN ; Shuang JIANG ; Wei-Zhe ZHANG ; Zi WANG ; Wei LI
Chinese Journal of Natural Medicines (English Ed.) 2018;16(9):700-713
The present study was designed to evaluate protective activity of an ethanol extract of the stems of Schisandra chinensis (SCE) and explore its possible molecular mechanisms on acetaminophen (APAP) induced hepatotoxicity in a mouse model. The results of HPLC analysis showed that the main components of SCE included schisandrol A, schisandrol B, deoxyschisandrin, schisandrin B, and schisandrin C and their contents were 5.83, 7.11, 2.13, 4.86, 0.42 mg·g, respectively. SCE extract was given for 7 consecutive days before a single hepatotoxic dose of APAP (250 mg·kg) was injected to mice. Our results showed that SCE pretreatment ameliorated liver dysfunction and oxidative stress, which was evidenced by significant decreases in aspartate transaminase (AST), alanine aminotransferase (ALT), malondialdehyde (MDA) contents and elevations in reduced glutathione (GSH) and superoxide dismutase (SOD) levels. These findings were associated with the result that the SCE pretreatment significantly decreased expression levels of 4-hydroxynonenal (4-HNE) and 3-nitrotyrosine (3-NT). SCE also significantly decreased the expression levels of Bax, mitogen- activated protein kinase (MAPK), and cleaved caspase-3 by APAP exposure. Furthermore, supplementation with SCE suppressed the expression levels of inducible nitric oxide synthase (iNOS) and cyclooxygenase-2 (COX-2), suggesting alleviation of inflammatory response. In summary, these findings from the present study clearly demonstrated that SCE exerted significant alleviation in APAP-induced oxidative stress, inflammation and apoptosis mainly via regulating MAPK and caspase-3 signaling pathways.
Acetaminophen
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adverse effects
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Alanine Transaminase
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metabolism
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Animals
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Apoptosis
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drug effects
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Aspartate Aminotransferases
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metabolism
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Caspase 3
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genetics
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metabolism
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Chemical and Drug Induced Liver Injury
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genetics
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metabolism
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physiopathology
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prevention & control
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Drugs, Chinese Herbal
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administration & dosage
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chemistry
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Glutathione
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metabolism
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Humans
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Liver
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drug effects
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metabolism
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Male
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Malondialdehyde
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metabolism
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Mice
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Mice, Inbred ICR
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Mitogen-Activated Protein Kinases
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chemistry
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genetics
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metabolism
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Oxidative Stress
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drug effects
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Schisandra
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chemistry
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Signal Transduction
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drug effects
9.Schisandrin B protects against nephrotoxicity induced by cisplatin in HK-2 cells via Nrf2-ARE activation.
Mei LI ; Jing JIN ; Jia LI ; Cui-Wen GUAN ; Wen-Wen WANG ; Yu-Wen QIU ; Zhi-Ying HUANG
Acta Pharmaceutica Sinica 2012;47(11):1434-1439
This study is to investigate the protection effect of schisandrin B (Sch B) against oxidation stress of HK-2 cells induced by cisplatin and the mechanisms involved. HK-2 cells were cultured and divided into different groups: solvent control group, cisplatin exposure group, positive group, Sch B treatment group. Cell viability and toxicity were evaluated by MTT and LDH assay. GSH level and SOD enzymes activities were also measured. DCFH-DA as fluorescence probe was used to detect ROS level by fluorescence microplate reader. Nrf2 translocation was detected by Western blotting. Real time Q-PCR was used to detect expressions of NQO1, HO-1 and GCLC mRNA level. The results showed that Sch B could significantly inhibit the decline of cell viability induced by cisplatin treatment (P < 0.05) and the protective effect was in a dose dependent manner. Furthermore, Sch B treatment significantly inhibited the increase of ROS level induced by cisplatin and reversed the decrease of GSH level (P < 0.05). When Sch B concentration was up to 5 micromol x L(-1), SOD enzyme activities were also enhanced significantly compared with that of the cisplatin group (P < 0.05). It was shown that Sch B could cause nuclear accumulation of Nrf2 in association with downstream activation of Nrf2 mediated oxidative response genes such as GCLC, NQO1 and HO-1. These results suggested Sch B could protect against the oxidative damage of HK-2 cells induced by cisplatin via the activation of Nrf2/ARE signal pathway.
Antineoplastic Agents
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toxicity
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Antioxidants
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isolation & purification
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pharmacology
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Cell Line
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Cell Survival
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drug effects
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Cisplatin
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toxicity
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Cyclooctanes
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isolation & purification
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pharmacology
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Glutamate-Cysteine Ligase
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genetics
;
metabolism
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Glutathione
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metabolism
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Heme Oxygenase-1
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genetics
;
metabolism
;
Humans
;
Kidney Tubules, Proximal
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cytology
;
metabolism
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L-Lactate Dehydrogenase
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metabolism
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Lignans
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isolation & purification
;
pharmacology
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NAD(P)H Dehydrogenase (Quinone)
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genetics
;
metabolism
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NF-E2-Related Factor 2
;
genetics
;
metabolism
;
Polycyclic Compounds
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isolation & purification
;
pharmacology
;
RNA, Messenger
;
metabolism
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Reactive Oxygen Species
;
metabolism
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Schisandra
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chemistry
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Signal Transduction
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Superoxide Dismutase
;
metabolism
10.Dual effects of extract of Schisandra chinensis Baill on rat hepatic CYP3A.
Qian CHEN ; Yu-jing WU ; Neng-neng CHENG ; Ya-lin LI ; Yong-ming WANG
Acta Pharmaceutica Sinica 2010;45(9):1194-1198
This study is to investigate the effects of aqueous extract of Schisandra chinensis Baill (WWZ), kadsurin, schisandrin A, schisandrin B and schisandrol B on rat hepatic CYP3A. Rats received a daily gavage of aqueous extract of WWZ for different times. The livers were harvested after gavage and subjected to microsome preparation. Microsomal CYP3A activity was determined by measuring the amount of the metabolite of testosterone (6 beta-hydroxytestosterone) with HPLC. Aqueous extract of WWZ, kadsurin and schisandrin A were incubated with microsomes obtained from rat. Microsomal CYP3A activity was determined by HPLC. Primary hepatocytes were separated and extracted from rat, then were treated with aqueous extract of WWZ, schisandrin A, schisandrin B and schisandrol B. Then, the expression of CYP3A1 mRNA was analyzed by RT-PCR. As for the in vivo assay, aqueous extract of WWZ significantly inhibited the enzyme activity of CYP3A after 12 h gavage. The inhibitory effect was converted to inductive effect after 3-day gavage. Aqueous extract of WWZ could induce the enzyme activity of CYP3A after 6-day gavage. Aqueous extract of WWZ and kadsurin showed a dose-dependent inhibition of CYP3A (IC50 of 487.8 microg mL(-1) and 6.2 micromol L(-1), separately). In rat primary hepatocytes, aqueous extract of WWZ (2.5 mg mL(-1)), schisandrin A (0.1 micromol L(-1)), schisandrin B (0.1 micromol L(-1)) and schisandrol B (10 micromol L(-1)) increased significantly the expression of CYP3A1 mRNA by 23%, 55%, 42% and 27%, respectively. Aqueous extract of WWZ could show dual effect on the enzyme activity of CYP3A in rat in vivo. Meanwhile, kadsurin showed a dose-dependent inhibition of the enzyme activity of hepatic CYP3A in vitro. And schisandrin A, schisandrin B and schisandrol B showed significant inductive effect on the expression of rat CYP3A1 mRNA.
Animals
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Cyclooctanes
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administration & dosage
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isolation & purification
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pharmacology
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Cytochrome P-450 CYP3A
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genetics
;
metabolism
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Dioxoles
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administration & dosage
;
isolation & purification
;
pharmacology
;
Dose-Response Relationship, Drug
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Drugs, Chinese Herbal
;
administration & dosage
;
isolation & purification
;
pharmacology
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Hepatocytes
;
drug effects
;
enzymology
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Inhibitory Concentration 50
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Lignans
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administration & dosage
;
isolation & purification
;
pharmacology
;
Male
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Microsomes, Liver
;
enzymology
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Plants, Medicinal
;
chemistry
;
Polycyclic Compounds
;
administration & dosage
;
isolation & purification
;
pharmacology
;
RNA, Messenger
;
metabolism
;
Rats
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Rats, Sprague-Dawley
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Schisandra
;
chemistry