1.Molecular epidemiological study on rubella virus circulating in Yunnan Province during 2011-2021.
Li Qun LI ; Jiang Rong LI ; Wen YU ; Jie ZHANG ; Li Fang HE ; Qiong Yu GONG ; Rong Rong ZHOU ; Zhen ZHU
Chinese Journal of Preventive Medicine 2023;57(8):1194-1198
Objective: To understand the genotype distribution and transmission pattern of rubella virus (RuV) circulating in Yunnan Province. Methods: Throat swab samples were collected from rubella outbreaks and sporadic cases in nine prefectures/cities of Yunnan Province from 2011 to 2021. Virus isolation, amplification of target genes and sequence determination were performed on the RuV-positive samples. The genotypes and lineages of Yunnan strains were determined by comparing them with the reference strains, and further phylogenetic analysis was performed with Yunnan strains and strains circulating in other provinces of China during the same period. Results: RuV circulating in Yunnan province during 2011-2021 showed significant genetic diversity, and three lineages, 1E-L1, 2B-L1 and 1E-L2, were detected. Two lineage-switches were also identified, including the conversion of 1E-L1 to 2B-L1 between 2012 and 2013, and the replacement of 2B-L1 to 1E-L2 after 2018. The time of the switches was basically consistent with the outbreak in Yunnan province in 2012 and the time of the rubella reemergence and epidemic between 2018 and 2019. The amino acid sequence of RuV virus strains in Yunnan province was highly conserved, and no important functional regions were changed. Conclusions: The transmission pattern of RuV in Yunnan province is generally consistent with the epidemic trend of RuV in other provinces of China.
Humans
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Rubella virus/genetics*
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Phylogeny
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China/epidemiology*
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Rubella/epidemiology*
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Genotype
2.Molecular epidemiological study on rubella virus circulating in Yunnan Province during 2011-2021.
Li Qun LI ; Jiang Rong LI ; Wen YU ; Jie ZHANG ; Li Fang HE ; Qiong Yu GONG ; Rong Rong ZHOU ; Zhen ZHU
Chinese Journal of Preventive Medicine 2023;57(8):1194-1198
Objective: To understand the genotype distribution and transmission pattern of rubella virus (RuV) circulating in Yunnan Province. Methods: Throat swab samples were collected from rubella outbreaks and sporadic cases in nine prefectures/cities of Yunnan Province from 2011 to 2021. Virus isolation, amplification of target genes and sequence determination were performed on the RuV-positive samples. The genotypes and lineages of Yunnan strains were determined by comparing them with the reference strains, and further phylogenetic analysis was performed with Yunnan strains and strains circulating in other provinces of China during the same period. Results: RuV circulating in Yunnan province during 2011-2021 showed significant genetic diversity, and three lineages, 1E-L1, 2B-L1 and 1E-L2, were detected. Two lineage-switches were also identified, including the conversion of 1E-L1 to 2B-L1 between 2012 and 2013, and the replacement of 2B-L1 to 1E-L2 after 2018. The time of the switches was basically consistent with the outbreak in Yunnan province in 2012 and the time of the rubella reemergence and epidemic between 2018 and 2019. The amino acid sequence of RuV virus strains in Yunnan province was highly conserved, and no important functional regions were changed. Conclusions: The transmission pattern of RuV in Yunnan province is generally consistent with the epidemic trend of RuV in other provinces of China.
Humans
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Rubella virus/genetics*
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Phylogeny
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China/epidemiology*
;
Rubella/epidemiology*
;
Genotype
3.Analysis on molecular epidemiology of rubella virus in Shandong province during 2000-2007.
Chang-Yin WANG ; Zhen ZHU ; Ai-Qiang XU ; Ping XIONG ; Li-Zhi SONG ; Qing XU ; Lei FENG ; Wen-Bo XU
Chinese Journal of Virology 2010;26(6):471-476
Analyze the genetic characteristics of sixteen strains of wild-type rubella viruses derived from Vero cells, Rk13 cells or Vero/slam cells, and isolated from throat samples in Shandong province during 2000-2007. The 1107 nucleotide sequence of nucleoprotein (E1) gene of these isolates were amplified by RT-PCR, and the PCR products were directly sequenced. Comparing with the gene tree that was constructed based on the 739 gene sequences of the WHO reference strains, twelve isolated strains belonged to 1E genotype, one strain belonged to 1F genotype, three strains belonged to 2A genotype. The first strain belonged to 1E genotype was isolated in Shandong province in 2001, then genotype 1E became dominant genotype of wild rubella viruses circulated. The 1E genotype circulated from 2006-2007 was different compared with that circulated from 2001 to 2002, but no significant deviation in temporal and geographic distribution was found. The strain belonged to Genotype 1F was only isolated during 2000 to 2001. The three strains of 2A genotype of rubella viruses were similar to rubella viruses vaccine strain (BRDII). The most nucleotide mutation of rubella viruses among the sixteen strains were nonsense mutation, and the amino acid sequences were highly conservative with no change in important antigen sites. Alike the previous reports, there was the same amino acid mutation in protein E1 at the site of 338 in all of the 1E genotype rubella viruses isolated during 2001- 2007 in Shandong (Leu338 --> Phe338).
Animals
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Cercopithecus aethiops
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China
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epidemiology
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Humans
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Molecular Epidemiology
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Molecular Sequence Data
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Phylogeny
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Rubella
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epidemiology
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virology
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Rubella virus
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classification
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genetics
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isolation & purification
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Vero Cells
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Viral Proteins
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genetics
5.Epidemiological analysis of rubella in Beijing 100013, China.
Dong-lei LIU ; Meng CHEN ; Li LU ; Jiang WU
Chinese Journal of Epidemiology 2011;32(9):949-950
Adolescent
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Adult
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Child
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Child, Preschool
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China
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epidemiology
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Female
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Humans
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Infant
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Male
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Rubella
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epidemiology
;
Young Adult
6.Rubella Seroprevalence in Korean Children.
Moran KI ; Bo Youl CHOI ; Myoung Hee KIM ; Young Jeon SHIN ; Taesung PARK
Journal of Korean Medical Science 2003;18(3):331-336
The aim of this study was to determe the age-specific rubella seroprevalence and the related factors in Korean children. Subjects of the study were 5,393 students from 8 elementary schools in Gyeonggi Province, Korea. Questionnaire surveys with blood sampling were conducted in 1993, 1996, and 1999. ELISA tests, used to detect rubella specific IgG antibody, were Imx & (Abbott, U.S.A.) in 1993 and 1999, and Enzygnost & (Behring, Germany) in 1996. The age-adjusted rubella susceptibility rate was 22.9% (95% CI: 22.8-23.0%) and it increased with age from 14% to 28%. The susceptibility rates of vaccinees, nonvaccinees, and the unknown group were 21%, 35%, and 27%, respectively (p=0.000). The rates by parental education levels for elementary and below, middle school, high school, and college and over were 37%, 26%, 24%, and 20%, respectively. The geometric mean titers (GMTs) of nonvaccinees, the unknown group, and vaccinees were 47 IU/mL, 42 IU/mL, and 37 IU/mL, respectively (p=0.000). The susceptibility level was too high to prevent the rubella epidemic in Korea, which necessitates a programme that will enhance the coverage for 1st and 2nd MMR vaccination among school children. In particular, more attention should be paid to the vaccination of the children whose parental education level is relatively low.
Age Distribution
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Antibodies, Viral/blood
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Child
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Data Collection
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Female
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Human
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Immunoglobulin G/blood
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Korea/epidemiology
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Male
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Rubella/*epidemiology/immunology/prevention & control
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Rubella Vaccine
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Seroepidemiologic Studies
8.Epidemiologic survey of outbreak of rubella in Nanjing City.
Xue-ping ZHU ; Yi-chao LAI ; Hai-yan CHEN
Chinese Journal of Epidemiology 2004;25(9):828-828
Adolescent
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Antibodies, Viral
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blood
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Child
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China
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epidemiology
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Disease Outbreaks
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Female
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Humans
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Immunoglobulin M
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blood
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Incidence
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Male
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Rubella
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epidemiology
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Rubella virus
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isolation & purification
9.Genetic characterization analysis on epidemic rubella virus strains isolated in Liaoning from 2007 to 2012.
Yan WANG ; Yan MA ; Xiao-Ting XU ; Xue-Song FAN ; Qian LIN ; Dan SUI ; Ye YIN ; Feng-Tong WU ; Bai-Ling PAN ; Guang-Yuan LIU ; Ji-Jian WANG ; Yue HAN ; Jun-Qiao GUO ; Zhuo ZHAO
Chinese Journal of Virology 2013;29(6):589-595
To analyze the genetic characterization of epidemic rubella virus strains isolated in Liaoning from 2007-2012, a total of 145 rubella virus strains were isolated using Vero/Slam cell line from the patients' throat swabs during rubella outbreaks and sporadics cases in Liaoning Province from 2007 to 2012. Fragments of 945 nucleotides containing 1E gene from 145 rubella virus isolates were amplified by RT-PCR, the PCR products were sequenced and analyzed. Based on the 739 nucleotides of 1E gene, the phylogenetic trees were constructed with 32 WHO rubella reference strains of 13 genotypes downloaded from GenBank and 145 rubella virus strains. The results showed that the 145 rubella virus strains in 2007 -2012 belonged to genotype 1E, nucleotide acids and amino acids similarities were 97.2%-100.0% and 97.6%-100.0%, respectively. Compared to the 1E reference strains(Rvi/ Dezhou.CHN/02, RVi/MYS/01), the nucleotide acids and amino acids similarities were 96.6%-99.2% and 98.2%-100.0%, respectively except for one amino acid change (Val246-Ala246) of RVi/Shenyang. Liaoning. CHN/13.11/13, and Asp262-Asn262 of RVi/Shenyang. Liaoning. CHN/13.11/4 and RVi/Liaoyang. Liaoning. CHN/26. 11/2. there had no change found in the important antigenic epitope sites, the hemagglutination inhibition and neutralization epitopes of the other rubella viruses. All the 145 strains isolated had the same amino acid change (Leu338--Phe338) in E1 protein. These findings suggested that genotype 1E of rubella virus was the predominant genotype in Liaoning province. the rubella prevailed in recent six years was mainly caused by rubella viruses genotype 1E with multi-transmission routes.
Amino Acid Sequence
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China
;
epidemiology
;
Epidemics
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Genotype
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Humans
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Molecular Sequence Data
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Phylogeny
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Rubella
;
epidemiology
;
virology
;
Rubella virus
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classification
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genetics
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isolation & purification
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Sequence Alignment
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Viral Envelope Proteins
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chemistry
;
genetics
10.Study on the epidemiological characteristics of rubella from 1990-2006 in Shanghai.
Jia-Yu HU ; Li-Na TAO ; Jie SHEN ; Yu-Chao WANG
Chinese Journal of Epidemiology 2007;28(7):645-648
OBJECTIVEThis paper analyzed the epidemiological characteristics of rubella in Shanghai from 1990 to 2006.
METHODSDescriptive epidemiological study was applied to analyze the cases from infectious diseases reported system on rubella during 1990-2006 in Shanghai. Excel was used for data analysis.
RESULTSThe reported rubella incidence rate in Shanghai was 0.15-451.57 per 100,000 during the period from 1990 to 2006. A rubella epidemic happened in 1993, with the number of reported cases as 58,104. The year 1998 was the low year on rubella with only 19 reported cases. In the years without rubella vaccine (RV), that was, from 1990 to 1994, the annual reported incidence rate of rubella was 93 per 100,000, and there was a distinct characteristic of seasonal difference, with peak in march through June each year. Rubella cases mostly affected children aged 5-9 and adolescent of 10-14 years old. Since the wide use of RV in Shanghai since 1995, RV and measles, mumps, rubella (MMR) had been widely accepted by parents. The vaccination rate of MMR reached up to 85 percent. The incidence of rubella was descending as year went by. The annual reported cases were less than 100 since then (with exception in the year 1995). Local outbreaks were further reduced and the age group structure had also changed since the adoption of RV. Patients with RV fallen into the age group of 0-4 were increasing quickly, accounting for 21.00% percent of all the patients and the age become older. 31.62% of the patients fell into 20 years of age and above. During 1995-2006, the incidence rates of rubella in age 25-29 and 30-34 were both much higher than that in the year without vaccine.
CONCLUSIONThe trend of older age among patients wilt Rubella increased the risk on fertile woman and geting congenital rebella syndrome.
Adolescent ; Adult ; Age Distribution ; Child ; Child, Preschool ; China ; epidemiology ; Disease Outbreaks ; Female ; Humans ; Incidence ; Infant ; Infant, Newborn ; Male ; Measles-Mumps-Rubella Vaccine ; administration & dosage ; Middle Aged ; Rubella ; epidemiology ; prevention & control ; Rubella Vaccine ; administration & dosage ; Vaccination ; statistics & numerical data ; Young Adult