2.Analysis of child with pyruvate carboxylase deficiency type A due to compound heterozygous variants of the PC gene.
Xiaoling ZHAO ; Jie DING ; Danqun JIN
Chinese Journal of Medical Genetics 2022;39(9):996-1000
OBJECTIVE:
To analyze the clinical features and genetic basis for a child with pyruvate carboxylase deficiency type A (PCD-A).
METHODS:
Clinical data of the child was retrospectively analyzed. The child and his parents were subjected to trio-whole exome sequencing, and candidate variants were verified by bioinformatics analysis.
RESULTS:
The child was admitted due to fever with vomiting and disturbance of consciousness. His clinical manifestations included severe decompensated acidosis, hypotension and intractable shock. Cranial MRI showed abnormal signal in the brain, and chest X-ray revealed acute pulmonary edema. DNA sequencing revealed that he has harbored compound heterozygous variants of the PC gene, namely c.182T>C (p.I61T) and c.2581G>A (p.V861M), which were respectively inherited from his father and mother. Neither variant was retrievable in the ClinVar and HGMD databases. Through prediction of protein structure, both variants may affect the functional stability of the protein product.
CONCLUSION
The compound heterozygous variants of the PC gene probably underlay the PCD-A in this child. Combined with the clinical features, the child was ultimately diagnosed as PCD-A. Above finding has enriched the spectrum of PC gene variation underlying PCD-A.
Child
;
Family
;
Humans
;
Male
;
Mutation
;
Pyruvate Carboxylase Deficiency Disease
;
Retrospective Studies
;
Exome Sequencing
3.Leigh Syndrome in a Filipino Child: A case report.
Michelle G. SY ; Ma. Antonia Aurora MORAL-VALENCIA
Journal of Medicine University of Santo Tomas 2022;6(2):1027-1038
Introduction:
Leigh disease and Leigh-like syndrome are a heterogenous group of neurodegenerative disorders involving any level of the neuraxis and may present with a variety of clinical presentations, prominent among them is psychomotor regression. Despite the remarkable number of established disease genes and novel mutations being discovered, many cases of Leigh syndrome remain without a genetic diagnosis, indicating that there are still more disease genes to be identified.
Case:
Here we present a case of a two and a half-year-old girl who presented with delayed acquisition of developmental milestones with subsequent regression, ataxia, and dyskinesia. Her work-up showed raised blood lactate levels and lactate peak in MR spectroscopy. Mitochondria genome showed absence of mitochondrial DNA mutation, while whole exome sequence analysis revealed a novel dynein gene variant, p.A1577S. Her parents underwent genetic testing as well, and her father also had the same dynein mutation, however, is non-symptomatic. She had an older brother who initially presented with ophthalmoplegia and eventually developed psychomotor regression. He subsequently expired from respiratory failure after almost 2 years from initial presentation. Both siblings were diagnosed with Leigh syndrome.
Conclusion
The diagnosis of Leigh syndrome remains based on characteristic clinical and radiologic findings. However, a specific defect must be identified if reliable genetic counseling is to be provided.
Neurodegenerative Diseases|leigh Disease
4.Clinical and molecular genetic analysis of a case of MEGDEL syndrome.
Xin ZHANG ; Dan LI ; Nan LYU ; Jie YANG ; Chengxia YANG ; Xuyan ZHANG ; Wenjun MA ; Dongxiao LI
Chinese Journal of Medical Genetics 2021;38(3):271-274
OBJECTIVE:
To explore the clinical and genetic characteristics of a child with MEGDEL syndrome.
METHODS:
Clinical data of the child was reviewed. Peripheral blood samples of the child and his parents were collected. Mitochondrial genome and the whole exome of the child were analyzed by next-generation sequencing. Candidate variants and its origin were verified by Sanger sequencing and fluorescence quantitative PCR.
RESULTS:
The patient, a 2-year-and-6-month-old male, has featured hypoglycemia, mental and motor retardation with regression. Cranial MRI showed bilateral putamen damage suggestive of Leigh syndrome. Testing of urine organic acid indicated that the level of 3-methylpentenoic acid was slightly increased. Whole exome sequencing revealed that the child has harbored heterozygous deletion of exons 6 to 17 and c.307A>T nonsense variant of the SERAC1 gene, which were respectively inherited from his parents who were asymptomatic. Treatment with Levocarnitine, vitamin B1, vitamin B2, coenzyme Q10, baclofen and glucuronolactone resulted in improvement of sleep and mental state.
CONCLUSION
A case of MEGDEL syndrome without deafness was diagnosed. Discovery of the nonsense mutation and large fragment deletion have enriched the spectrum of SERAC1 gene variants.
Child, Preschool
;
Hearing Loss, Sensorineural/genetics*
;
Humans
;
Leigh Disease
;
Male
;
Metabolism, Inborn Errors/genetics*
;
Molecular Biology
;
Mutation
6.Analysis of mitochondrial gene mutations in a child with Leigh syndrome.
Chinese Journal of Medical Genetics 2019;36(4):318-321
OBJECTIVE:
To explore the genetic basis for a child with Leigh syndrome.
METHODS:
Clinical features and laboratory test of the patient were analyzed. Sanger sequencing and multiplex ligation-dependent probe amplification (MLPA) of the mitochondrial genome were carried out. Next generation sequencing (NGS) was used to capture and sequence nuclear genes related to mitochondrial structure and function.
RESULTS:
The child presented with developmental delay, unsteady gait, falling episodes, bilateral upper extremity tremor, muscle hypertonia, convulsions, and mouth angle asymmetry. Serum lactic acid was significantly increased. Cranial MRI showed abnormal signal in bilateral cerebellar hemispheres, bilateral basal ganglia, left thalamus, and corona radiata. Her mother and brother did not show any anomalies. Sanger sequencing revealed the child, her mother and brother all carried the MT-ND3 m.10191 T>C mutation, with heterogeneous rates respectively being 74.34%, 9.73%, and 6.28%. MLPA revealed heterogeneity of (MT-ND6, MTCYB-390nt)] deletion in all three individuals. No significant mutation was found by NGS sequencing of the children, their parents and brother.
CONCLUSION
Leigh syndrome can be caused by the simultaneous existence of multiple mitochondrial genes, and multiple mutations may play a synergic role in the occurrence of the disease.
Child
;
DNA, Mitochondrial
;
Female
;
Genes, Mitochondrial
;
High-Throughput Nucleotide Sequencing
;
Humans
;
Leigh Disease
;
genetics
;
Male
;
Mutation
8.Leigh Syndrome: Subgroup Aanalysis according to Mitochondrial DNA Mutation.
Na Lee JEE ; Sun Mi HER ; Se Hoon KIM ; Min Jung LEE ; Chul Ho LEE ; Young Mock LEE
Journal of the Korean Child Neurology Society 2018;26(1):7-12
PURPOSE: Leigh syndrome (LS) is a rare, progressive neurodegenerative disorder with characteristic abnormalities in the central nervous system. Such patients present with heterogeneous clinical symptoms and genetic abnormalities; thus, prognosis is difficult to anticipate. The present study investigates whether distinct patient characteristics are associated with mitochondrial DNA (mtDNA) mutation in LS patients. METHODS: We retrospectively analyzed data from patients diagnosed with LS at our hospital who were assessed using genomic sequencing of mtDNA. A subgroup analysis was performed to divide patients according to the mtDNA sequencing results. RESULTS: Among the 85 patients enrolled, 18 had mtDNA mutations. Most patients had lactic acidosis and a lactate/pyruvate ratio above 20, indicating respiratory chain abnormalities. In the subgroup analysis, the mutation group had a significantly higher female-to-male ratio, alanine level, ocular involvement, and midbrain and medulla abnormalities on magnetic resonance imaging (MRI). CONCLUSION: The subgroup analysis indicates that mtDNA sequencing is recommended for female patients, or those who exhibit ocular involvement, high alanine levels, or MRI findings with lesions in the midbrain and medulla.
Acidosis, Lactic
;
Alanine
;
Brain Stem
;
Central Nervous System
;
DNA, Mitochondrial*
;
Electron Transport
;
Female
;
Humans
;
Leigh Disease*
;
Magnetic Resonance Imaging
;
Mesencephalon
;
Mitochondria
;
Neurodegenerative Diseases
;
Prognosis
;
Retrospective Studies
9.Clinical, Neuroimaging, and Pathological Analyses of 13 Chinese Leigh Syndrome Patients with Mitochondrial DNA Mutations.
Xiao-Lin YU ; Chuan-Zhu YAN ; Kun-Qian JI ; Peng-Fei LIN ; Xue-Bi XU ; Ting-Jun DAI ; Wei LI ; Yu-Ying ZHAO
Chinese Medical Journal 2018;131(22):2705-2712
Background:
Leigh syndrome (LS) is a rare disease caused by mitochondrial defects and has high phenotypic and genotypic heterogeneity. We analyzed the clinical symptoms, neuroimaging, muscular histopathology, and genotypes of 13 Chinese LS patients with mitochondrial DNA (mtDNA) mutations.
Methods:
Mutations in mtDNA were identified by targeted sequencing. The brain imaging features on magnetic resonance imaging (MRI) were analyzed. The levels of lactate in fasting blood and cerebrospinal fluid (CSF) were routinely tested. The levels of urinary organic acids, plasma amino acids, and acylcarnitines were examined with gas chromatography-mass spectrometry and tandem mass spectrometry. The histopathological traits of skeletal muscles were analyzed under microscope.
Results:
Among 13 patients, mutations of MT-NDs (n = 8) and MT-ATP6 (n = 4) genes were most common. Strabismus (8/13), muscle weakness (8/13), and ataxia (5/13) were also common, especially for the patients with late-onset age after 2 years old. However, respiratory distress was common in patients with early-onset age before 2 years old. The most frequently affected brain area in these patients was the brain stem (12/13), particularly the dorsal part of midbrain, followed by basal ganglia (6/13), thalamus (6/13), cerebellum (5/13), and supratentorial white matter (2/13). Besides, the elevated lactate levels in CSF (6/6) were more common than those in serum (7/13). However, the analysis of abnormal plasma amino acid and urinary organic acid showed limited results (0/3 and 1/4, respectively). Muscular histopathology showed mitochondrial myopathy in the three late-onset patients but not in the early-onset ones.
Conclusions
Noninvasive genetic screening is recommended for mtDNA mutations in MT-NDs and MT-ATP6 genes in patients with ophthalmoplegia, muscle weakness, ataxia, and respiratory disorder. Furthermore, the lactate detection in CSF and the brain MRI scanning are suggested as the diagnosis methods for LS patients with mtDNA mutations.
Child
;
Child, Preschool
;
Creatine Kinase
;
blood
;
Cytochrome-c Oxidase Deficiency
;
DNA, Mitochondrial
;
genetics
;
Fasting
;
blood
;
cerebrospinal fluid
;
Female
;
Humans
;
Infant
;
Lactic Acid
;
blood
;
cerebrospinal fluid
;
Leigh Disease
;
diagnostic imaging
;
genetics
;
Magnetic Resonance Imaging
;
Male
;
Mutation
;
genetics
;
Neuroimaging
;
methods
10.Leigh Syndrome in Childhood: Neurologic Progression and Functional Outcome.
Jin Sook LEE ; Hunmin KIM ; Byung Chan LIM ; Hee HWANG ; Jieun CHOI ; Ki Joong KIM ; Yong Seung HWANG ; Jong Hee CHAE
Journal of Clinical Neurology 2016;12(2):181-187
BACKGROUND AND PURPOSE: Few studies have analyzed the clinical course and functional outcome in Leigh syndrome (LS). The aim of this study was to determine the clinical, radiological, biochemical, and genetic features of patients with LS, and identify prognostic indicators of the disease progression and neurological outcome. METHODS: Thirty-nine patients who had been diagnosed with LS at the Seoul National University Children's Hospital were included. Their medical records, neuroimaging findings, and histological/biochemical findings of skeletal muscle specimens were reviewed. Targeted sequencing of mitochondrial DNA was performed based on mitochondrial respiratory chain (MRC) enzyme defects. RESULTS: Isolated complex I deficiency was the most frequently observed MRC defect (in 42% of 38 investigated patients). Mitochondrial DNA mutations were identified in 11 patients, of which 81.8% were MT-ND genes. The clinical outcome varied widely, from independent daily activity to severe disability. Poor functional outcomes and neurological deterioration were significantly associated with early onset (before an age of 1 year) and the presence of other lesions additional to basal ganglia involvement in the initial neuroimaging. CONCLUSIONS: The neurological severity and outcome of LS may vary widely and be better than those predicted based on previous studies. We suggest that age at onset and initial neuroimaging findings are prognostic indicators in LS.
Basal Ganglia
;
Disease Progression
;
DNA, Mitochondrial
;
Electron Transport
;
Humans
;
Leigh Disease*
;
Medical Records
;
Muscle, Skeletal
;
Neuroimaging
;
Seoul


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