1.GRA Proteins of Toxoplasma gondii: Maintenance of Host-Parasite Interactions across the Parasitophorous Vacuolar Membrane.
The Korean Journal of Parasitology 2009;47(Suppl):S29-S37
The dense granule of Toxoplasma gondii is a secretory vesicular organelle of which the proteins participate in the modification of the parasitophorous vacuole (PV) and PV membrane for the maintenance of intracellular parasitism in almost all nucleated host cells. In this review, the archives on the research of GRA proteins are reviewed on the foci of finding GRA proteins, characterizing molecular aspects, usefulness in diagnostic antigen, and vaccine trials in addition to some functions in host-parasite interactions.
Animals
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Antigens, Protozoan/*metabolism
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Cytoplasmic Granules/metabolism
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*Host-Parasite Interactions
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Humans
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Protozoan Proteins/*metabolism
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Toxoplasma/*metabolism
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Toxoplasmosis/*parasitology
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Vacuoles/*metabolism
2.Identification of endoplasmic reticulum-shaping proteins in Plasmodium parasites.
Sha SUN ; Li LV ; Zhi YAO ; Purnima BHANOT ; Junjie HU ; Qian WANG
Protein & Cell 2016;7(8):615-620
3.Genetic Polymorphisms in VIR Genes among Indian Plasmodium vivax Populations.
Purva GUPTA ; Veena PANDE ; Aparup DAS ; Vineeta SINGH
The Korean Journal of Parasitology 2014;52(5):557-564
The vir genes are antigenic genes and are considered to be possible vaccine targets. Since India is highly endemic to Plasmodium vivax, we sequenced 5 different vir genes and investigated DNA sequence variations in 93 single-clonal P. vivax isolates. High variability was observed in all the 5 vir genes; the vir 1/9 gene was highly diverged across Indian populations. The patterns of genetic diversity do not follow geographical locations, as geographically distant populations were found to be genetically similar. The results in general present complex genetic diversity patterns in India, requiring further in-depth population genetic and functional studies.
Antigens, Protozoan/*genetics
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Humans
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India/epidemiology
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Malaria, Vivax/epidemiology/parasitology
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Phylogeny
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Plasmodium vivax/*genetics
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*Polymorphism, Genetic
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Protozoan Proteins/genetics/*metabolism
4.Cloning and expression of extracellular region gene located in N-terminus of Leishmania Donovani.
Xian CHEN ; Jianping CHEN ; Jia'nan XU ; Xin WANG ; Rui LU ; Dianxiang LU ; Xiaosu HO
Journal of Biomedical Engineering 2009;26(4):820-824
The objective of this study was to construct and express recombinant prokaryotic plasmid pET32a (+)- ast1 in E. coli BL21(DE3). Amastin gene was amplified from genomic DNA of Leishmania Donovani and its transmembran region was predicted by the methods of SOSUI and Tmpred; astl located in N-terminus of amastin gene was amplified and cloned into prokaryotic plasmid pET32a(+), which was named pET32a(+)-ast1, and then rAST1 was expressed in E. coli BL21(DE3). The results of SDS-PAGE and immunobloting assay showed that a fusion protein rAST1 (relative molecular mass about 27 kDa) was able to express in BL21. The recombinant prokaryotic plasmid pET32a(+)- ast1 was successfully constructed, and noted to be efficiently expressed in E. coli BL21(DE3).
Animals
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Cloning, Molecular
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Escherichia coli
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genetics
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metabolism
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Extracellular Space
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Genes, Protozoan
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Leishmania donovani
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genetics
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Plasmids
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genetics
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Protozoan Proteins
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biosynthesis
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genetics
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Recombinant Fusion Proteins
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biosynthesis
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genetics
5.Identification of the binding site on glycophorin A for Plasmodium falciparum EBA-175.
Xiao-min SUN ; Wen-bo HAO ; Ming LI ; Ren LUO ; Yu-hua JIA
Journal of Southern Medical University 2007;27(11):1696-1698
OBJECTIVETo identify the binding site on glycophorin A (GPA) for EBA-175 to provide clue for developing short peptide vaccine and therapeutic agents against Plasmodium falciparum.
METHODSWith the recombinant protein of EBA-175 as the target molecule, the mimetic peptides of GPA were screened from a 12-mer random peptide library. Three rounds of biopanning were carried out, and enzyme-linked immunosorbent assay (ELISA), competitive ELISA, Dot-ELISA and Western blotting used to evaluate the binding between the phage-borne peptides and EBA-175. The insert DNA sequences of positive clones were determined and their amino acid sequences deduced.
RESULTSThirty clones from the third round were randomly selected, of which 27 were found positive by sandwich ELISA. Competitive ELISA proved that most of the phage-borne peptides could competitively inhibit the binding of antibody (EBA-175 Ab) with EBA-175. Analysis of DNA and amino acid sequences indicated that 24 positive phage clones contained the conservative sequence of IRR, which was highly homologous with the 114-116 amino acids of GPA.
CONCLUSIONThese phage-displayed peptides can bind with EBA-175, and the amino acid sequence IRR might play an important role in the binding between EBA-175 and GPA.
Antigens, Protozoan ; metabolism ; Binding Sites ; Enzyme-Linked Immunosorbent Assay ; Glycophorin ; chemistry ; Humans ; Peptide Library ; Plasmodium falciparum ; Protozoan Proteins ; metabolism ; Sequence Analysis, DNA ; Sequence Analysis, Protein
6.Bioinformatics analysis of the RNA binding protein DDX39 of Toxoplasma gondii.
Z YANG ; J WANG ; Y QI ; X TIAN ; X MEI ; Z ZHANG ; S WANG
Chinese Journal of Schistosomiasis Control 2023;35(4):358-365
OBJECTIVE:
To analyze the RNA binding protein of Toxoplasma gondii (TgDDX39) using bioinformatics technology, and to evaluate the immunogenicity of TgDDX39, so as to provide insights into development of toxoplasmosis vaccines.
METHODS:
The amino acid sequences of TgDDX39 were retrieved from the ToxoDB database, and the physicochemical properties, transmembrane structure domain, signal peptide sites, post-translational modification sites, coils, secondary and tertiary structures, hydrophobicity, and antigenic epitopes of the TgDDX39 protein were predicted using online bioinformatics tools, incluiding ProtParam, TMHMM 2.0, SignalP 5.0, NetPhos 3.1, COILS, SOPMA, Phyre2, ProtScale, ABCpred, SYFPEITHI and DNA-STAR.
RESULTS:
TgDDX39 protein was predicted to be an unstable hydrophilic protein with the molecular formula of C2173H3458N598O661S18, which contained 434 amino acids and had an estimated molecular weight of 49.1 kDa and a theoretical isoelectric point of 5.55. The protein was predicted to have an extremely low possibility of signal peptides, without transmembrane regions, and contain 27 phosphorylation sites. The β turn and random coils accounted for 39.63% of the secondary structure of the TgDDX39 protein, and a coiled helix tended to produce in one site. In addition, the TgDDX39 protein contained multiple B and T cell antigenic epitopes.
CONCLUSIONS
Bioinformatics analyses predict that TgDDX39 protein has high immunogenicity and contains multiple antigenic epitopes. TgDDX39 protein is a potential candidate antigen for vaccine development.
Humans
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Toxoplasma/metabolism*
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Toxoplasmosis/prevention & control*
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Vaccines
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Epitopes, T-Lymphocyte
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Computational Biology
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Protozoan Proteins/chemistry*
7.Interactions between secreted GRA proteins and host cell proteins across the paratitophorous vacuolar membrane in the parasitism of Toxoplasma gondii.
Hye Jin AHN ; Sehra KIM ; Hee Eun KIM ; Ho Woo NAM
The Korean Journal of Parasitology 2006;44(4):303-312
Interactions between GRA proteins of dense granules in Toxoplasma gondii and host cell proteins were analyzed by yeast two-hybrid technique. The cMyc-GRA fusion proteins expressed from pGBKT7 plasmid in Y187 yeast were bound to host cell proteins from pGADT7-Rec-HeLa cDNA library transformed to AH109 yeast by mating method. By the selection procedures, a total of 939 colonies of the SD/-AHLT culture, 348 colonies of the X-alpha-gal positive and PCR, 157 colonies of the X-beta-gal assay were chosen for sequencing the cDNA and finally 90 colonies containing ORF were selected to analyze the interactions. GRA proteins interacted with a variety of host cell proteins such as enzymes, structural and functional proteins of organellar proteins of broad spectrum. Several specific bindings of each GRA protein to host proteins were discussed presumptively the role of GRA proteins after secreting into the parasitophorous vacuoles (PV) and the PV membrane in the parasitism of this parasite.
Vacuoles/*metabolism
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Two-Hybrid System Techniques
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Toxoplasma/metabolism/*pathogenicity
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Protozoan Proteins/*metabolism/secretion
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Proteins/*metabolism
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Organelles/metabolism
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Intracellular Membranes/*metabolism
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Humans
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Hela Cells
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Gene Library
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Cytoplasmic Granules
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Animals
8.Trypanosome Glycosylphosphatidylinositol Biosynthesis.
Yeonchul HONG ; Taroh KINOSHITA
The Korean Journal of Parasitology 2009;47(3):197-204
Trypanosoma brucei, a protozoan parasite, causes sleeping sickness in humans and Nagana disease in domestic animals in central Africa. The trypanosome surface is extensively covered by glycosylphosphatidylinositol (GPI)-anchored proteins known as variant surface glycoproteins and procyclins. GPI anchoring is suggested to be important for trypanosome survival and establishment of infection. Trypanosomes are not only pathogenically important, but also constitute a useful model for elucidating the GPI biosynthesis pathway. This review focuses on the trypanosome GPI biosynthesis pathway. Studies on GPI that will be described indicate the potential for the design of drugs that specifically inhibit trypanosome GPI biosynthesis.
Animals
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Biosynthetic Pathways
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Glycosylphosphatidylinositols/*biosynthesis/chemistry
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Humans
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Protozoan Proteins/genetics/metabolism
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Trypanosoma brucei brucei/chemistry/genetics/*metabolism
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Trypanosomiasis, African/*parasitology
9.Trypanosome Glycosylphosphatidylinositol Biosynthesis.
Yeonchul HONG ; Taroh KINOSHITA
The Korean Journal of Parasitology 2009;47(3):197-204
Trypanosoma brucei, a protozoan parasite, causes sleeping sickness in humans and Nagana disease in domestic animals in central Africa. The trypanosome surface is extensively covered by glycosylphosphatidylinositol (GPI)-anchored proteins known as variant surface glycoproteins and procyclins. GPI anchoring is suggested to be important for trypanosome survival and establishment of infection. Trypanosomes are not only pathogenically important, but also constitute a useful model for elucidating the GPI biosynthesis pathway. This review focuses on the trypanosome GPI biosynthesis pathway. Studies on GPI that will be described indicate the potential for the design of drugs that specifically inhibit trypanosome GPI biosynthesis.
Animals
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Biosynthetic Pathways
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Glycosylphosphatidylinositols/*biosynthesis/chemistry
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Humans
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Protozoan Proteins/genetics/metabolism
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Trypanosoma brucei brucei/chemistry/genetics/*metabolism
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Trypanosomiasis, African/*parasitology
10.Expression, purification and serological reactivity of a chimeric antigen of GRA6 with P30 from Toxoplasma gondii.
Yue-Xi LI ; Jin-Hai ZHANG ; Kai-Hua TAO ; Pei-Tang HUANG
Chinese Journal of Biotechnology 2003;19(6):674-679
Major surface protein (p30) and Dense Granule Antigen GRA6 of Toxoplasma gondii have good antigenicity, and could be used for detection of IgM against Toxoplasma gondii. GRA6 may complement P30 to reach more high sensitivity for detection of antibodies to Toxoplasma gondii, so, we try to express the chimeric protein of GRA6 and P30 by genetic engineering, identify its antignenicity and use for developing diagnosis reagent. Antigenic domains of p30 and GRA6 of Toxoplasma gondii were screened by analyzing their sequences using the software ANTHEWIN. Two DNA fragments encoding respectively antigenic domains of p30 and GRA6 were cloned, they were inserted into the same expression vector pET28a( + ) and expressed as a chimeric protein in Escherichia coli. BL21(DE3), the expressed chimeric protein of p30 with GRA6 in a form of inclusion body was about 25% of total proteins of E. coli. BL21(DE3). The inclusion body was washed once with 0.5% Triton X-100 and dissolved with 0.5% SKL, after renaturation by gradient dialysis, the recombinant protein was purified by DEAE-Sepharose FF cation column and then detected with 12% SDS-PAGE, it exists mainly in the eluted peak with 300 mmol/L NaCl and has high purity. By using enzyme-linked immunosorbent assay (ELISA), the recombinant protein was examined for reactivity with immunoglobulin M (IgM) antibodies in 6 sera from patients infected with Toxoplasma gondii ., it was reactive with all the 6 sera but not with sera from normal people, these results showed that the recombinant chimeric antigen has good antigenicity and specificity and could be used for detection of IgM against Toxoplasma gondii. The expressed chimeric protein could be used for epidemic investigation of Toxoplasma gondii, blood donor screening, especially for detection of pregnant women, and is of great significance in prevention of Toxoplasma gondii infection.
Animals
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Antigens, Protozoan
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genetics
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immunology
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metabolism
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Electrophoresis, Polyacrylamide Gel
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Enzyme-Linked Immunosorbent Assay
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Female
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Humans
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Immunoglobulin M
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immunology
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Models, Genetic
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Polymerase Chain Reaction
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Pregnancy
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Protozoan Proteins
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genetics
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metabolism
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Recombinant Fusion Proteins
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genetics
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immunology
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metabolism
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Toxoplasma
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genetics
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immunology