2.Two novel STK11 mutations in three Chinese families with Peutz-Jeghers syndrome.
Ya-gang ZUO ; Ke-jian XU ; Bin SU ; Michael G HO ; Yue-hua LIU
Chinese Medical Journal 2007;120(13):1183-1186
BACKGROUNDPeutz-Jeghers syndrome (PJS) is an autosomal dominantly inherited disease. STK11/LKB1 gene germline mutations have been identified as responsible for PJS. In our study, we investigated the molecular basis of PJS and evaluated correlation between the STK11 mutations and the Chinese population.
METHODSWe collected three pedigrees of PJS and screened the 9 exons and their flanking intronic sequences of STK11/LKB1 gene in the probands and normal individuals in the families using polymerase chain reaction (PCR) and direct sequencing.
RESULTSSequencing of the STK11 gene in the probands of 3 families revealed two novel mutations (c180C-->G and c998-1002delGCAGC) in exon 1 and exon 8, respectively. The mutation of c180C-->G resulted in a premature termination codon. The other mutation, a deletion of five nucleotides (998-1002delGCAGC) in exon 8, predicted to generate a translational frameshift and a termination at codon 1070.
CONCLUSIONSThe growing number of mutations in PJS pedigrees suggests the molecular basis of PJS. STK11 gene mutation can be detected in most patients with PJS.
Child ; Female ; Humans ; Male ; Mutation ; Pedigree ; Peutz-Jeghers Syndrome ; genetics ; Protein-Serine-Threonine Kinases ; genetics
3.DRD2/ANKK1 Taq IA polymorphism and early infant temperament.
Jing MA ; Chun-Xiang HUANG ; Pi-Xiang PI ; Ai-Bin XIA ; Lin-Yan SU
Chinese Journal of Contemporary Pediatrics 2010;12(2):106-109
OBJECTIVETo investigate whether there is an association between DRD2/ANKK1 Taq IA polymorphism and early infant temperament.
METHODSDRD2/ANKK1 Taq IA polymorphism (rs1800497) was determined using polymerase chain reaction-ligase detection reaction (PCR-LDR) techniques in 149 Chinese Han infants from Changsha City. Their mothers were asked to complete the Early Infant Temperament Questionnaires (EITQ) when the infants were 1 to 4 months old (mean: 2.75 months). There were three genotypes found in these infants: C/C, T/T and C/T. The subjects were subdivided into T-carrier (CT, TT) and non-T-carrier (CC) groups for statistical analysis.
RESULTSThere were no differences in the temperament style distribution between the T-carrier and non-T carrier groups. There were also no statistically significant differences between the two groups in the score of the nine temperament dimensions.
CONCLUSIONSDRD2/ANKK1 Taq IA polymorphism is not associated with early infant temperament.
Genotype ; Humans ; Infant ; Polymorphism, Genetic ; Protein-Serine-Threonine Kinases ; genetics ; Receptors, Dopamine D2 ; genetics ; Temperament
4.Characterization the response of Chlamydomonas reinhardtii serine/threonine protein kinase mutant to blue light.
Wangning LI ; Mengjing LIANG ; Ze YANG ; Yanan LI ; Chunhui ZHANG ; Chunli JI ; Runzhi LI ; Song QIN ; Jinai XUE ; Hongli CUI
Chinese Journal of Biotechnology 2023;39(11):4563-4579
In order to investigate the molecular mechanism of silk/threonine protein kinase (STK)-mediated blue light response in the algal Chlamydomonas reinhardtii, phenotype identification and transcriptome analysis were conducted for C. reinhardtii STK mutant strain crstk11 (with an AphvIII box reverse insertion in stk11 gene coding region) under blue light stress. Phenotypic examination showed that under normal light (white light), there was a slight difference in growth and pigment contents between the wild-type strain CC5325 and the mutant strain crstk11. Blue light inhibited the growth and chlorophyll synthesis in crstk11 cells, but significantly promoted the accumulation of carotenoids in crstk11. Transcriptome analysis showed that 860 differential expression genes (DEG) (559 up-regulated and 301 down-regulated) were detected in mutant (STK4) vs. wild type (WT4) upon treatment under high intensity blue light for 4 days. After being treated under high intensity blue light for 8 days, a total of 1 088 DEGs (468 upregulated and 620 downregulated) were obtained in STK8 vs. WT8. KEGG enrichment analysis revealed that compared to CC5325, the crstk11 blue light responsive genes were mainly involved in catalytic activity of intracellular photosynthesis, carbon metabolism, and pigment synthesis. Among them, upregulated genes included psaA, psaB, and psaC, psbA, psbB, psbC, psbD, psbH, and L, petA, petB, and petD, as well as genes encoding ATP synthase α, β and c subunits. Downregulated genes included petF and petJ. The present study uncovered that the protein kinase CrSTK11 of C. reinhardtii may participate in the blue light response of algal cells by mediating photosynthesis as well as pigment and carbon metabolism, providing new knowledge for in-depth analysis of the mechanism of light stress resistance in the algae.
Chlamydomonas reinhardtii/genetics*
;
Photosynthesis/genetics*
;
Plants/metabolism*
;
Protein Kinases
;
Threonine/metabolism*
;
Carbon/metabolism*
;
Serine/metabolism*
5.Advance of the study on LRRK2 gene in Parkinson's disease.
Chinese Journal of Medical Genetics 2008;25(6):657-659
The leucine-rich repeat kinase2 (LRRK2) has been identified to be the gene causing autosomal dominant inherited Parkinson's disease(PD)8. The clinical features of this type of PD are similar to those of idiopathic PD, but the pathological changes are diverse. The mutation types and frequencies of the LRRK2 distribute unevenly in different populations. LRRK2 is a large complex protein with multiple functions and expresses widely in human body. Sequence alignment shows that LRRK2 might be a multiple function kinase for substrate phosphorylation and might also act as a scaffolding protein. Further study on the physiological function and pathogenic mechanism of LRRK2 will help to find out the possible pathogenesis and new treatment for PD.
Animals
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Continental Population Groups
;
genetics
;
Humans
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Leucine-Rich Repeat Serine-Threonine Protein Kinase-2
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Mutation
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Parkinson Disease
;
genetics
;
pathology
;
Protein-Serine-Threonine Kinases
;
chemistry
;
genetics
;
metabolism
;
Sequence Alignment
7.Biological functions and ubiquitin modification of TBK1 in innate immunity.
Henan XU ; Xinyu LI ; Min FANG ; Wei JIANG
Chinese Journal of Biotechnology 2021;37(4):1189-1204
The innate immune system initiates innate immune responses by recognizing pathogen-related molecular patterns on the surface of pathogenic microorganisms through pattern recognition receptors. Through cascade signal transduction, it activates downstream transcription factors NF-κB and interferon regulatory factors (IRFs), and then leads to the production of inflammatory cytokines and type Ⅰ interferon, which resists the infection of pathogenic microorganism. TBK1 is a central adapter protein of innate immune signaling pathway and can activate both NF-κB and IRFs. It is a key protein kinase in the process of anti-infection. The finetuning regulation of TBK1 is essential to maintain immune homeostasis and resist pathogen invasion. This paper reviews the biological functions and ubiquitin modification of TBK1 in innate immunity, to provide theoretical basis for clinical treatment of pathogenic infections and autoimmune diseases.
Immunity, Innate
;
Interferon Regulatory Factor-3/metabolism*
;
Protein-Serine-Threonine Kinases/genetics*
;
Signal Transduction
;
Ubiquitin
8.Mining Polo-Box domain of Polo-like kinase 1 as a new therapeutic target for cancer.
Zhenghao FU ; Meihua SU ; Xiaoping LIU ; Yunyu CHEN
Chinese Journal of Biotechnology 2020;36(11):2298-2312
Polo-like kinase 1 (Plk1) is widely regarded as one of the most promising targets for cancer therapy due to its essential role in cell division and tumor cell survival. At present, most Plk1 inhibitors have been developed based on kinase domain, some of which are in clinical trial. However, inhibitors targeting kinase domain face off-target effect and drug resistance owing to the conserved nature and the frequent mutations in the ATP-binding pocket. In addition to a highly conserved kinase domain, Plk1 also contains a unique Polo-Box domain (PBD), which is essential for Plk1's subcellular localization and mitotic functions. Inhibitors targeting Plk1 PBD show stronger selectivity and less drug resistance for cancer therapy. Therefore, Plk1 PBD is an attractive target for the development of anti-cancer agents. In this review, we will summarize the up-to date drug discovery for targeting Plk1 PBD, including the molecular structure and cellular functions of Plk1 PBD. Small-molecule inhibitors targeting Plk1 PBD not only provide an opportunity to specifically inhibit Plk1 activity for cancer treatment, but also unveil novel biological basis regarding the molecular recognition of Plk1 and its substrates.
Cell Cycle Proteins/genetics*
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Neoplasms/drug therapy*
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Protein Kinase Inhibitors/pharmacology*
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Protein-Serine-Threonine Kinases/genetics*
;
Proto-Oncogene Proteins/genetics*
9.Identification of a de novo interstitial 21q22.12q22.13 deletion in a patient with intellectual disability.
Ying PENG ; ZhengJun JIA ; Jialun PANG ; Jiancheng HU ; Hui XI ; Hua WANG
Chinese Journal of Medical Genetics 2019;36(7):704-707
OBJECTIVE:
To explore the genetic basis of a child featuring intellectual disability, developmental delay and epilepsy.
METHODS:
Cytogenetic and molecular analysis including chromosomal karyotyping analysis, single nucleotide polymorphism array (SNP array) and qPCR were performed.
RESULTS:
The karyotype of the child was determined as 46, XX; SNP array: arr [19]21q22.12q22.13(36 860 195-38 801 482)×1 dn. A heterozygous 1.9 Mb microdeletion was detected at 21q22.12q22.13. qPCR has confirmed deletion of exon 1 of the DYRK1A gene, which has occurred de novo.
CONCLUSION
A 21q22 deletion was diagnosed with multiple genetic methods. Genotype-phenotype correlation suggested DYRK1A to be a candidate for intellectual disability.
Child
;
Developmental Disabilities
;
genetics
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Epilepsy
;
genetics
;
Genetic Association Studies
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Humans
;
Intellectual Disability
;
genetics
;
Karyotyping
;
Protein-Serine-Threonine Kinases
;
genetics
;
Protein-Tyrosine Kinases
;
genetics
;
Sequence Deletion
10.Screening hv-S/TPK from TAC library of a Triticum aestivum-Haynaldia villosa translocation line.
Yulei SUN ; Aizhong CAO ; Xueming YANG ; Xiaoyun WANG ; Peidu CHEN
Chinese Journal of Biotechnology 2008;24(8):1327-1332
Hv-S/TPK gene, a resistance related gene to powdery mildew, was cloned by using genechip, and its expression was upregulated after the inoculation of Blumeria graminis to Haynaldia villosa. Using the specific primers of Hv-S/TPK to screen a genomic TAC (Transformation-competent artificial chromosome) library of translocation line 6VS/6AL, a positive TAC was screened. A 5-kb fragment containing Hv-S/TPK was subcloned and identified. This 5160-bp fragment (GenBank Accession No. EU153366) was determined by specific primer walking. The analysis of Hv-S/TPK genomic sequence showed three introns and four extrons between start code and stop code. In the promoter region of Hv-S/TPK, there were W-box and OCS-like elements which were the elements related to disease resistance. In this study, the positive TAC clone was used to as probe in situ hybridized to mitotic metaphase chromosomes of translocation line. The result of fluorescence in situ hybridization (FISH) indicated that the TAC clone containing Hv-S/TPK was from Haynaldia villosa chromosome.
Base Sequence
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Chromosomes, Artificial
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Cloning, Molecular
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Genomic Library
;
Molecular Sequence Data
;
Plant Diseases
;
genetics
;
Poaceae
;
genetics
;
Protein-Serine-Threonine Kinases
;
genetics
;
Serine
;
genetics
;
Translocation, Genetic
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Triticum
;
genetics
;
virology