We developed an identifier mapping application for bioinformatics research in Java programming language. It is easy to use and provides many usability functionalities that are expected as essentials for a professional application. It supports three widely used mapping services and can convert many ids from one source database into many target databases at once. Id mapping across service providers is possible by remapping the resultant ids. Because it adheres to the NetBeans platform architecture, it can be incorporated into other NetBeans platform applications as an id mapping provider without adaption or modification.
Computational Biology ; Indonesia ; Programming Languages

TIR (Translation Initiation Region) efficiency is very important in prokaryotic expression. The TIR's efficiency is highly dependent on SD (Shine-Dalgarno) sequence, distance between SD sequence and start codon, DB (Downstream Box) sequence, TIR's second structure, codon adaptation and so on. In this paper, we designed and implemented the software to optimize DB sequence and 5' rare codons. It generated some optimization sequences by analyzing the target sequence and comparing it with 16S RNA. And the optimization sequences is sorting by number of base pairing, location of base pairing and codon adaptation. We drew up the algorithm and the core of code in this paper.
Base Sequence ; Codon ; genetics ; Programming Languages ; Protein Biosynthesis ; genetics ; Software

To realize the real-time transmission of temperature data and display using the platform of intelligent mobile phone and bluetooth. Application of Arduino Uno R3 in temperature data acquisition of digital temperature sensor DS18B20 acquisition, through the HC-05 bluetooth transmits the data to the intelligent smart phone Android system, realizes transmission of temperature data. Using Java language to write applications program under Android development environment, can achieve real-time temperature data display, storage and drawing temperature fluctuations drawn graphics. Temperature sensor is experimentally tested to meet the body temperature measurement precision and accuracy. This paper can provide a reference for other smart phone mobile medical product development.
Body Temperature ; Cell Phone ; Humans ; Programming Languages ; Software ; Wireless Technology

Radiosurgery requires integral procedure where special devices and computer systems are needed for localization, dose planning and treatment. The aim of this work is to verify the overall mechanical accuracy of our LINAC and develop dose calculation algorithm for LINAC radiosurgery. The alignment of treatment machine and the performance testing of the entire system were extensively carried out and the basic data such as percent depth dose, off-axis ratio and output factor were measured. A three dimensional treatment planning system for stereotactic radiosurgery has been developed. We used an IBM personal computer with C programming language (IBM personal system/2, Model 80386, 1BM Co., USA) for calcu1ating the dose distribution. As a result, deviations at isocenter on gantry and table rotation for our treatment machine were acceptable since they were less than 2 mm. According to the phantom experiments, the focusing isocenter were successful by the error of less than 2 mm. Finally, the mechanical accuracy of our three dimensional planning system was confirmed by film dosimetry in sphere phantom.
Computer Systems ; Film Dosimetry ; Humans ; Microcomputers ; Programming Languages ; Radiosurgery*

A design scheme of a tele-screening system for diabetic retinopathy (DR) has been proposed, especially the communication subsystem. The scheme uses serial communication module consisting of ARM 7 microcontroller and relays to connect remote computer and fundus camera, and also uses C++ programming language based on MFC to design the communication software consisting of therapy and diagnostic information module, video/audio surveillance module and fundus camera control module. The scheme possesses universal property in some remote medical treatment systems which are similar to the system.
Computers ; Diabetic Retinopathy ; diagnosis ; Humans ; Programming Languages ; Telemedicine ; instrumentation

This paper describes a web service for biomedical image mosaicing. A web site based on CGI (Common Gateway Interface) is implemented. The system is based on Browser/Server model and is tested in www. Finally implementation examples and experiment results are provided.
Internet ; standards ; Programming Languages ; Radiology Information Systems ; Software

In this article, a new application model has been given for digital signing technology used in the Electronic Medical Record system, which uses digital signature to implement authentication mechanism and doctor signing, and uses a notarial digital signature server to implement the third party's digital signature for notarial mechanism. It can prevent the others from modifying the doctor's record and prevent the doctor himself from modifying the record as well. Case history database preserves signed data to ensure the authenticity and validity, in law, of the Electronic Medical Record.
Computer Security ; Medical Records Systems, Computerized ; Programming Languages ; Software

BACKGROUND AND OBJECTIVES: To measure nasal cavity function as an airway, rhinomanometry and acoustic rhinometry are currently being used in clinical settings. However, these methods are not helpful for continuously measuring the aerodynamic status of both nasal cavities simultaneously. Therefore, a new instrument to evaluate the nasal flow is required. MATERIALS AND METHODS: To measure the airflow of bilateral nasal cavity simultaneously, two thermocouples are held in the headset, with the tips of thermocouples positioned below nostrils. The thermocouples are connected to the analog-digital converter and the digitized data is transferred to a notebook computer, in which a graphical programming language software is installed. Eighteen adults were recruited for this study who had no structural abnormality in their nasal cavities. For every subject, measurements from acoustic rhinometry, the thermocouple device, and rhinomanometry were taken in succession. The data from the thermocouple device was compared with those taken from the acoustic rhinometry and rhinomanometry. RESULTS: A negative correlation was noted between the minimum cross-sectional area by acoustic rhinometry and the inspiratory slope by thermocouple. No correlation was noted between the results for rhinomanometry and the thermocouple device. CONCLUSION: The thermocouple device has some advantages over other devices for its non-invasive, continuous, and real-time measurements and its ability to measure bilateral nasal cavity simultaneously.
Adult ; Humans ; Nasal Cavity ; Programming Languages ; Rhinomanometry ; Rhinometry, Acoustic

This research aims at the process of three-dimensional(3D) reconstruction from medical body data using VRML and VC++, JavaScript language and focuses on the application of VRML for 3D reconstruction of medical digital images. The 2D medical digital images firstly are modified in VC++ language. Then, the images are manipulated by mould built in VRML and modified in JavaScript language. Finally, the 3D reconstruction of body internal organs can be formed in high quality near to those got in traditional methods. Furthermore, VRML browser can offer better windows of man-computer interaction in real time environment. As a new method and tool quite different from traditional ways of 3D reconstruction, VRML is useful for the visualization of medical 3D reconstruction based on 2D images and has a promising prospect in the field of medical image.
Image Processing, Computer-Assisted ; methods ; Imaging, Three-Dimensional ; methods ; Programming Languages ; Software

This research studies the process of dynamic concision and 3D reconstruction from medical body data using VRML and JavaScript language, focuses on how to realize the dynamic concision of 3D medical model built with VRML. The 2D medical digital images firstly are modified and manipulated by 2D image software. Then, based on these images, 3D mould is built with VRML and JavaScript language. After programming in JavaScript to control 3D model, the function of dynamic concision realized by Script node and sensor node in VRML. The 3D reconstruction and concision of body internal organs can be formed in high quality near to those got in traditional methods. By this way, with the function of dynamic concision, VRML browser can offer better windows of man-computer interaction in real time environment than before. 3D reconstruction and dynamic concision with VRML can be used to meet the requirement for the medical observation of 3D reconstruction and has a promising prospect in the fields of medical image.
Aged ; Algorithms ; Humans ; Image Processing, Computer-Assisted ; methods ; Imaging, Three-Dimensional ; methods ; Male ; Programming Languages ; Software