1.Genetic analysis of a child with combined oxidative phosphorylation deficiency 14 due to variant of FARS2 gene.
Jian MA ; Hongwei ZHANG ; Yuqiang LYU ; Min GAO ; Dong WANG ; Zhongtao GAI ; Yi LIU
Chinese Journal of Medical Genetics 2022;39(12):1393-1397
OBJECTIVE:
To explore the genetic etiology for an infant featuring convulsive status epilepticus, developmental delay and elevated plasma lactate.
METHODS:
Whole exome sequencing and mitochondrial D-loop sequencing were carried out for the infant. Candidate variants were verified by Sanger sequencing. Previously reported FARS2 gene variants were searched from the PubMed, Wanfang and CNKI databases.
RESULTS:
The infant was found to harbor compound heterozygous variants of the FARS2 gene, namely c.925G>A (p.G309S) and c.405C>A (p.H135Q), which were inherited from its mother and father, respectively. The former has been recorded by the HGMD as a pathogenic variant, whilst the latter was predicted to be likely pathogenic based on the guidelines of the American College of Medical Genetics and Genomics. A total of 30 COXPD14 cases were retrieved from the literature, with common mutations including missense variants, in-frame deletions, splice-site variants and large deletions.
CONCLUSION
The common manifestations of COXPD14 have included developmental delay (96%), status epilepticus (97%) and increased lactic acid (96%). The compound heterozygous variants of the FARS2 gene probably underlay the disorder in this child.
Female
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Humans
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Infant
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Genetic Testing
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Mitochondrial Diseases
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Mitochondrial Proteins/genetics*
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Phenylalanine-tRNA Ligase
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Status Epilepticus
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Exome Sequencing
2.Cloning, expression, purification and activity assay of Trypanosoma brucei phenylalanyl-tRNA synthetase in Escherichia coli.
Ying YAO ; Guangwei GAO ; Dawei LI
Chinese Journal of Biotechnology 2010;26(1):130-135
Phenylalany--tRNA synthetase is a key enzyme for protein synthesis in Trypanosoma. Its validation as an inhibition. target will enable the development of a new generation of anti-Trypanosoma drugs. However, little is known about the isolation of the Trypanosoma Phenylalanyl-tRNA synthetase. Here we report the cloning, expression, purification, and activity assay of Phenylalanyl-tRNA synthetase from Trypanosoma brucei in Escherichia coli host. We co-cloned the alpha-subunit and beta-subunit of Phenylalanyl-tRNA synthetase from Trypanosoma brucei genomic DNA into the co-expression vector pCOLADuet. We successfully expressed the Trypanosoma brucei Phenylalanyl-tRNA synthetase in E. coli host, purified the whole enzyme by Ni-Hind affinity column and verified it by Western blotting. In addition, we tested its enzymatic activity by isotope labeling. The whole work laid a solid foundation for in vitro the screening and optimization of Trypanosoma brucei phenylalanyl-tRNA synthetase inhibitors.
Cloning, Molecular
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Escherichia coli
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genetics
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metabolism
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Genetic Vectors
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genetics
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Phenylalanine-tRNA Ligase
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biosynthesis
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genetics
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Protozoan Proteins
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biosynthesis
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genetics
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Recombinant Proteins
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biosynthesis
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genetics
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metabolism
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Trypanosoma brucei brucei
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enzymology
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genetics