1.Molecular Genetic Characteristics of Trimethoprim Resistance in Clinical and Normal Fecal Isolates of Escherichia coli.
Sung Yong SEOL ; Dong Taek CHO ; Yoo Chul LEE ; Haeng Seop SHIN ; Neung Hee KIM
Journal of the Korean Society for Microbiology 1999;34(4):347-361
One hundred and thirty trimethoprim-resistant R plasmids derived from of Escherichia coli isolated from clinical specimens and feces of healthy collegians were examined for incompatibility, EcoRI endonuclease restriction fragment pattern, and Southern hybridization with DHFR I, II, III, V, and VII probe. 1. Most trimethoprim-resistant R plasmids were resistant to ampicillin, tetracycline, chloramphenicol, gentamicin, and kanamycin, and showed multiple drug resistance and various antimicrobial resistance patterns. 2. Trimethoprim-resistant R plasmids ranged from 90 to 50 kilobase and 42.3% of R plasmids tested were classified to incompatibilty group Inc FI, Inc FII or Inc FIV, 3. Among 48 random selected R plasmids from various origin, 14 R plasmids (including 9 of 14 Inc FII plasmids and 3 of 14 Inc FI plasmids) hybridized with DHFR VII oligonucleotide probe but others did not respond to any of DHFR probes used. 4. Most R plasmids showed various EcoRI endonuclease fragments and different reaction sites by Southern hybridization. Six plasmids showed identical or nearly identical molecular weight, EcoRI endonuclease fragment patterns and different sites of Southern hybridization. But 2 Inc FII plasmids derived from urine and feces showed identical pattern. These findings, if confirmed by further studies, suggest that normal flora E. coli can act as reservoir of resistant genes and, consequently, as a factor in the dissemination of these genes among enteric pathogens and need to be examined further.
Ampicillin
;
Chloramphenicol
;
Deoxyribonuclease EcoRI
;
Drug Resistance, Multiple
;
Escherichia coli*
;
Escherichia*
;
Feces
;
Gentamicins
;
Immunodeficiency Virus, Feline
;
Kanamycin
;
Molecular Biology*
;
Molecular Weight
;
Plasmids
;
R Factors
;
Tetracycline
;
Trimethoprim Resistance*
;
Trimethoprim*
2.Detection of Antibiotic Resistant Genes in Salmonella enterica Serovar Typhimurium Isolated from Foodborne Patients in Seoul Using Multiplex-PCR.
Young Hee OH ; Mi Ok SONG ; Moo Sang KIM ; Seog Gee PARK ; Young Ki LEE
Journal of Bacteriology and Virology 2005;35(3):183-190
The frequency of antibiotic resistance among Salmonella enterica serovar Typhimurium has increased due to the transfer of multiple resistance factors. We detected the 13 antibiotic resistance genes by multiplex-PCR and compared with the results of phage typing and antibiotic disk diffusion for 49 S. typhimurium isolated from food-poisoning outbreaks in Seoul from 1999 to 2002. Resistance genes for tetracycline, streptomycin, ampicillin, sulfonamide, amino-glycoside-modifying enzyme, chloramphenicol, kanamycin, and trimethoprim were detected in 67.3%, 57.1%, 26.5%, 8.1%, 8.1%, 5%, 2.0%, and 0% of isolates, respectively. Overall 28 isolates (57.1%) possessed two or more antibiotic resistance genes. Class 1 integron carrying multidrug resistace genes, ant(3")-IaB, blaPSE, qacE delta1/sul, and tet G were amplified especially in only DT104 isolates. Among the related resistance genes for same antibiotics, strA and strB for streptomycin resistance were simultaneously detected but tetA and tetB for tetracycline were sporadically detected. DT 104 isolates contained only aadA2 and tetG.
Ampicillin
;
Anti-Bacterial Agents
;
Bacteriophage Typing
;
Chloramphenicol
;
Diffusion
;
Disease Outbreaks
;
Drug Resistance, Microbial
;
Humans
;
Integrons
;
Kanamycin
;
R Factors
;
Salmonella enterica*
;
Salmonella*
;
Seoul*
;
Streptomycin
;
Tetracycline
;
Trimethoprim
3.Epidemiology of Salmonella enterica Serotype Typhi Infections in Korea for Recent 9 Years: Trends of Antimicrobial Resistance.
Sunmi YOO ; Hyunjoo PAI ; Jeong hum BYEON ; Youn Ho KANG ; Shukho KIM ; Bok Kwon LEE
Journal of Korean Medical Science 2004;19(1):15-20
The aim of this study is to characterize the epidemiological features of typhoid fever, categorized as class 1 notifiable disease in Korea and to analyze the recent change of antimicrobial resistance of Salmonella enterica serotype Typhi isolated nationwide. We retrospectively analyzed the 1,692 culture-proven cases from 1992 to 2000, using the data of the Korean National Institute of Health. The overall incidence of culture-proven typhoid fever was 0.41 per 100,000 population. It occurred all over the country, but the southeastern part of Korean peninsula had the higher incidence rate than other areas. There were several outbreaks suspected, of which two outbreaks were confirmed. The resistance rate against chloramphenicol showed mild increase, but the ampicillin, trimethoprim/sulfamethoxazole, kanamycin, or nalidixic acid resistance remained at the similar levels for the past 9 yr. There were 21 (1.3%) multidrug-resistant (MDR) strains isolated since 1992, and the number of those has increased. Two strains resistant to ciprofloxacin were first identified in Korea.
Ampicillin/pharmacology
;
Anti-Bacterial Agents/pharmacology
;
Chloramphenicol/pharmacology
;
*Drug Resistance, Microbial
;
Drug Resistance, Multiple
;
Human
;
Kanamycin/pharmacology
;
Korea
;
Nalidixic Acid/pharmacology
;
Retrospective Studies
;
Salmonella Infections/*epidemiology
;
Salmonella enterica/*metabolism
;
Seasons
;
Serotyping
;
Support, Non-U.S. Gov't
;
Time Factors
;
Trimethoprim/pharmacology
4.Detection and Characterization of Integrons in Nontyphoid Salmonella Clinical Isolates.
Jung Eun LEE ; Su Jin PARK ; Sung Han KIM ; Mi Na KIM ; Nam Yong LEE ; Bok Kwon LEE ; Sang Oh LEE ; Yang Soo KIM ; Jun Hee WOO ; Sang Ho CHOI
Infection and Chemotherapy 2009;41(3):165-173
BACKGROUND: Nontyphoid Salmonella (NTS) is a leading cause of human food-borne enteritiS. It has been known that integron, a naturally occurring gene capture and expression element, plays an important role in the development and dissemination of multidrug-resistance. In this study, we investigated the prevalences and molecular characteristics of integrons in NTS clinical strains. MATERIALS AND METHODS: Between 1995-96 and 2000-03, a total 261 NTS clinical strains comprising 39 serotypes were collected from clinical specimens. All strains were serotyped, and the MICs of ampicillin, chloramphenicol, streptomycin, sulfamethoxazole, tetracycline, and trimethoprim were determined by agar dilution method. Integrons were detected by PCR amplification of integrase genes, and gene cassettes were determined by PCR and sequencing. Conjugation experiments were performed using E. coli J53 as a recipient. The clonal relationship was analyzed by pulsed-field gel electrophoresis (PFGE). RESULTS: Of the 261 strains tested, class 1 integrons were present in 21 strains (8.0%). Class 2 and class 3 integrons were not found. The integron-positive rate was higher in S. Typhimurium (24.2% [8/33]) than in S. Enteritidis (2.0% [3/153]). Overall rates of antimicrobial resistance were higher in integron-positive strains. dhfr12-orfF-aadA2 gene cassette was detected in 5 strains, aadA2 in 4 strains, dhfr17-orfF-aadA5 in 2 strains, and addA1 in 1 strain. Ten integron-positive transconjugants were successfully selected. Among 8 integron-positive strains of S. Typhimurium, 7 had similar PFGE patterns. CONCLUSION: This study suggests that integrons are already playing a significant role in antimicrobial resistance in NTS. Continuous monitoring is needed to detect the emergence and spread of integron-mediated antimicrobial resistance.
Agar
;
Ampicillin
;
Chloramphenicol
;
Drug Resistance, Microbial
;
Electrophoresis, Gel, Pulsed-Field
;
Enteritis
;
Humans
;
Integrases
;
Integrons
;
Polymerase Chain Reaction
;
Prevalence
;
Salmonella
;
Sprains and Strains
;
Streptomycin
;
Sulfamethoxazole
;
Tetracycline
;
Trimethoprim
5.Detection and Characterization of Integrons in Nontyphoid Salmonella Clinical Isolates.
Jung Eun LEE ; Su Jin PARK ; Sung Han KIM ; Mi Na KIM ; Nam Yong LEE ; Bok Kwon LEE ; Sang Oh LEE ; Yang Soo KIM ; Jun Hee WOO ; Sang Ho CHOI
Infection and Chemotherapy 2009;41(3):165-173
BACKGROUND: Nontyphoid Salmonella (NTS) is a leading cause of human food-borne enteritiS. It has been known that integron, a naturally occurring gene capture and expression element, plays an important role in the development and dissemination of multidrug-resistance. In this study, we investigated the prevalences and molecular characteristics of integrons in NTS clinical strains. MATERIALS AND METHODS: Between 1995-96 and 2000-03, a total 261 NTS clinical strains comprising 39 serotypes were collected from clinical specimens. All strains were serotyped, and the MICs of ampicillin, chloramphenicol, streptomycin, sulfamethoxazole, tetracycline, and trimethoprim were determined by agar dilution method. Integrons were detected by PCR amplification of integrase genes, and gene cassettes were determined by PCR and sequencing. Conjugation experiments were performed using E. coli J53 as a recipient. The clonal relationship was analyzed by pulsed-field gel electrophoresis (PFGE). RESULTS: Of the 261 strains tested, class 1 integrons were present in 21 strains (8.0%). Class 2 and class 3 integrons were not found. The integron-positive rate was higher in S. Typhimurium (24.2% [8/33]) than in S. Enteritidis (2.0% [3/153]). Overall rates of antimicrobial resistance were higher in integron-positive strains. dhfr12-orfF-aadA2 gene cassette was detected in 5 strains, aadA2 in 4 strains, dhfr17-orfF-aadA5 in 2 strains, and addA1 in 1 strain. Ten integron-positive transconjugants were successfully selected. Among 8 integron-positive strains of S. Typhimurium, 7 had similar PFGE patterns. CONCLUSION: This study suggests that integrons are already playing a significant role in antimicrobial resistance in NTS. Continuous monitoring is needed to detect the emergence and spread of integron-mediated antimicrobial resistance.
Agar
;
Ampicillin
;
Chloramphenicol
;
Drug Resistance, Microbial
;
Electrophoresis, Gel, Pulsed-Field
;
Enteritis
;
Humans
;
Integrases
;
Integrons
;
Polymerase Chain Reaction
;
Prevalence
;
Salmonella
;
Sprains and Strains
;
Streptomycin
;
Sulfamethoxazole
;
Tetracycline
;
Trimethoprim
6.Antimicrobial Resistance and Integrons Found in Commensal Escherichia coli Isolates from Healthy Humans.
Je Chul LEE ; Hee Young KANG ; Jae Young OH ; Jae Ho JEONG ; Sung Yong SEOL ; Dong Taek CHO ; Jungmin KIM ; Yoo Chul LEE
Journal of Bacteriology and Virology 2006;36(3):133-139
The emergence and spread of antimicrobial resistance among the pathogenic and commensal Enterobacteriaceae are of great concern worldwide. We characterized the antimicrobial resistance and integrons found in commensal Escherichia coli from healthy humans in the community. Class 1 integrase (intl1) and class 2 integrase (intl2) genes were identified in 22 (13.3%) and 2 (1.2%) of 165 E. coli isolates, respectively. dfrA17-aadA5 and dfrA1-aadA2 were the most common class 1 integrons. The prevalence of each type of class 1 integron among commensal E. coli isolates during 2001~2003 was similar to that of clinical E. coli isolates from hospital-acquired infections during 1994~1999. The resistant rates of commensal E. coli isolates carrying intl1 to ampicillin, streptomycin, gentamicin, sulfamethoxazole, trimethoprim, chloramphenicol, and tetracycline were significantly higher than those of intl1-negative E. coli isolates (p<0.05). Integrons were directly associated with multidrug resistance in commensal E. coli isolates. It is hypothesized that multidrug-resistant Enterobacteriaceae from hospital-acquired infections are a potential reservoir for integrons associated with resistance genes found in commensal E. coli isolates in the community
Ampicillin
;
Chloramphenicol
;
Drug Resistance, Multiple
;
Enterobacteriaceae
;
Escherichia coli*
;
Escherichia*
;
Gentamicins
;
Humans*
;
Integrases
;
Integrons*
;
Prevalence
;
Streptomycin
;
Sulfamethoxazole
;
Tetracycline
;
Trimethoprim
7.Clinical Characteristics of Community Acquired Enterococcal Urinary Tract Infections In Children.
Seong Heon KIM ; Taek Jin LIM ; Hye Young KIM ; Su Eun PARK ; Su Young KIM
Journal of the Korean Society of Pediatric Nephrology 2013;17(1):19-24
PURPOSE: Recently, enterococcus spp. have become one of the most common nosocomial pathogens with increasing rates of multi-drug resistance. However, study on enterococcal urinary tract infections (UTIs) in children is very limited, especially community acquired UTIs. We studied the clinical characteristics of enterococcus spp. in community acquired UTIs and antibiotic resistance within our urban area. METHODS: All children with first episode of community acquired UTIs due to enterococcus spp. and Echerichia coli who were admitted in Pusan National University Children's Hospital between January 2010 and January 2013 were included in our study. We retrospectively reviewed their medical records. RESULTS: During the study period, 201 patients were identified to have first episode of community acquired UTIs. 154 cases were E.coli UTIs (76.6%) and 11 cases were enterococcal UTIs (5.5%) and all enterococcus spp. were Enterococcus feacalis. In enterococcal UTI group, voiding cystourethrogram(VCUG) was performed in 7/11 patients and demonstrated 4 vesicoureteral refluxes (VURs) with renal scar and 3 patients underwent corrective surgery. In E.coli UTI group, VCUG was performed in 121/154 patients and demonstrated 23 VURs and 11 patients underwent corrective surgery. Enterococcal group had significant high rate of underlying urinary abnormalities and surgical corrections compared with E. coli group. All enterococcus spp. were susceptible to ampicillin, vancomycin and linezolid, but all were resistant to tetracycline. They also showed 71.4% resistance to trimethoprim-sulfamethoxazole and 20% resistance to ciprofloxacin. CONCLUSION: Community acquired enterococcal UTIs in children were rare within our urban area. However, they could be indicative of severe underlying urinary tract abnormalities.
Acetamides
;
Ampicillin
;
Child
;
Cicatrix
;
Drug Resistance, Microbial
;
Drug Resistance, Multiple
;
Enterococcus
;
Humans
;
Oxazolidinones
;
Retrospective Studies
;
Tetracycline
;
Trimethoprim, Sulfamethoxazole Drug Combination
;
Urinary Tract
;
Urinary Tract Infections
;
Vancomycin
;
Vesico-Ureteral Reflux
;
Linezolid
8.Non-typhoidal Salmonella Gastroenteritis in Childhood: Clinical Features and Antibiotics Resistance.
So Young NA ; Byung Chan KIM ; Hye Ran YANG ; Soo Jin JUNG ; Kyung Hoon LEE ; Jae Sung KO ; Hoan Jong LEE ; Eui Chong KIM ; Jeong Kee SE
Korean Journal of Pediatric Gastroenterology and Nutrition 2002;5(2):150-157
PURPOSE: As the incidence of non-typhoidal salmonella strains resistant to antibiotics has been increased, we attempted to investigate clinical aspects of non-typhoidal salmonella gastroenteritis and antibiotics resistance. METHODS: From January 2000 to June 2002, 99 children with positive stool culture of non-typhoidal salmonella were studied about clinical features, the incidence of antibiotics and multi-drug resistance and the difference of incidence of antibiotics resistance according to immune status. RESULTS: There were 66 males and 33 females. The majority of them were under 5 years of age (71%). 25 children were immunocompromised due to chemotherapy, steroid or immunosuppressive treatment. Serogroup D was the most common isolates (65%) followed by B (16%), C (8%) and E (8%). Resistance rate of 30% to ampicillin, 12% to chloramphenicol, 20% to trimethoprim- sulfamethoxazole (TMP-SMX), 11% to cefotaxime and 8% to cefixime were obtained. All isolates were susceptible to ciprofloxacine. Resistance rate to cefotaxime and cefixime in immunocompromised patients was 24% and 14.3% respectively, which were significantly higher compared to that in immunocompetent patients (6.8%, 5.6%, p<0.05). 11 isolates were resistant to three or more antibiotics. The incidence of multi-drug resistant isolates was significantly higher in immunocompromised patients (24%) than that of immunocompetent patients (6.8%). CONCLUSION: Because of the high prevalence of non-typhoidal salmonella strains resistant to ampicillin, chloramphenicol and TMP-SMX, third-generation cephalosporin might be the treatment of choice in non-typhoidal salmonella gastroenteritis. In particular, antibiotics should be carefully selected in immunocompromised patients because non-typhoidal salmonellas from them showed the higher incidence of antibiotic resistance and multi-drug resistance.
Ampicillin
;
Anti-Bacterial Agents*
;
Cefixime
;
Cefotaxime
;
Child
;
Chloramphenicol
;
Ciprofloxacin
;
Drug Resistance, Microbial
;
Drug Resistance, Multiple
;
Drug Therapy
;
Female
;
Gastroenteritis*
;
Humans
;
Immunocompromised Host
;
Incidence
;
Male
;
Prevalence
;
Salmonella*
;
Sulfamethoxazole
;
Trimethoprim, Sulfamethoxazole Drug Combination
9.Epidemiological Study of Serratia marcescens Isolates by Molecular Analysis.
Sung Yong SEOL ; Dong Taek CHO ; Yoo Chul LEE ; Haeng Seop SHIN ; Hee Kyung CHANG ; Sung Joe BAE
Journal of the Korean Society for Microbiology 1997;32(5):503-520
Ninety-two strains of Serratia marcescens isolated from 5 hospitals were analyzed for plasmid profile, antimicrobial drug resistance pattern, biotyping, and production of pigment. Ninety-three percents of strains were resistant to chloramphenicol (Cm), tetracycline (Tc), sulfisoxazole (Su), cefazolin (Cz), ampicillin (Ap), and rifampin (Rf). A majority of strains were susceptible to amikacin (Ak), ciprofloxacin (Ci), and cefotaxim (Ct). Fifty-four resistance patterns were found in 94 strains and the most prevalent resistance pattern was CmTcSuApCzRf. Seventeen (17.4%) isolates could transfer their partial resistance to E. coli or Klebsiella pneumoniae by conjugation. Twenty-seven plasmid profiles in 54 strains (58.7%) were detected, however no predominant patterns were seen in isolates from each hospital. Eleven biotypes were detected. The common types were A3b (29.4%) and A8b (27.1%), predominant types were found in each hospital. Twenty strains from 4 of 5 hospitals showed consistence of 3 types. These results indicate that plasmid profile analysis, Grimont biotyping, and resistance pattern type of strains in combination are useful as an epidemiological tool for S. marcescens isolates and some of isolates were confirmed as nosocomial strains.
Amikacin
;
Ampicillin
;
Cefazolin
;
Cefotaxime
;
Chloramphenicol
;
Ciprofloxacin
;
Drug Resistance, Microbial
;
Epidemiologic Studies*
;
Klebsiella pneumoniae
;
Plasmids
;
Rifampin
;
Serratia marcescens*
;
Serratia*
;
Sulfisoxazole
;
Tetracycline
10.Antibiotic Resistance Patterns and Serotypes of Salmonella spp. Isolated at Jeollanam-do in Korea.
Ki Bok YOON ; Byung Joon SONG ; Mi Yeong SHIN ; Hyun Cheol LIM ; Yeon Hee YOON ; Doo Young JEON ; Hoon HA ; Soo In YANG ; Jung Beom KIM
Osong Public Health and Research Perspectives 2017;8(3):211-219
OBJECTIVES: Few long-term studies have been conducted on the serotype and antibiotic resistance patterns of Salmonella speices (spp.) The aim of this study was to determine the serotypes and antibiotic resistance patterns of Salmonella spp. isolated at Jeollanam-do in Korea from 2004 to 2014. METHODS: A total of 276 Salmonella samples were evaluated. Serotyping was carried out according to the Kauffmann–White scheme. Antibiotic susceptibility was determined using the Vitek II system with an AST-N169 card. RESULTS: A total of 22 different serotypes were identified, and the major serotypes were Salmonella Enteritidis (116 strains, 42.0%) and Salmonella Typhimurium (60 strains, 21.7%). The highest resistance was observed in response to nalidixic acid (43.4%), followed by ampicillin (40.5%) and tetracycline (31.6%). Resistance to nalidixic acid was detected in 81.0% of S. Enteritidis. Multidrug resistance was detected in 43.3% of Salmonella spp. S. Enteritidis and S. Typhimurium presented the highest resistance (98.3%) and multidrug resistance rate (73.3%), respectively. The most highly observed antibiotic resistance pattern among Salmonella spp. in this study was ampicillin-chloramphenicol (14 strains, 5.7%). CONCLUSION: Overall, S. Enteritidis and S. Typhimurium showed higher antibiotic resistance than the other Salmonella serotypes tested in this study. Our study will provide useful information for investigating the sources of Salmonella infections, as well as selecting effective antibiotics for treatment.
Ampicillin
;
Anti-Bacterial Agents
;
Drug Resistance, Microbial*
;
Drug Resistance, Multiple
;
Jeollanam-do*
;
Korea*
;
Nalidixic Acid
;
Salmonella enteritidis
;
Salmonella Infections
;
Salmonella typhimurium
;
Salmonella*
;
Serogroup*
;
Serotyping
;
Tetracycline