1.Cloning and characterization of the promoters of the key genes CPT, SRPP and REF involved in Periploca sepium rubber biosynthesis.
Shuai CUI ; Ren CHEN ; Leqing QU
Chinese Journal of Biotechnology 2023;39(7):2794-2805
Hevea brasiliensis is the main source of natural rubber. Restricted by its tropical climate conditions, the planting area in China is limited, resulted in a low self-sufficiency. Periploca sepium which can produce natural rubber is a potential substitute plant. cis-prenyltransferase (CPT), small rubber particle protein (SRPP) and rubber elongation factor (REF) are key enzymes involved in the biosynthesis of cis-1, 4-polyisoprene, the main component of natural rubber. In this study, we cloned the promoter sequences of CPT, SRPP and REF through chromosome walking strategy. The spatial expression patterns of the three promoters were analyzed using GUS (β-glucuronidase) as a reporter gene driven by the promoters through Agrobacterium-mediated genetic transformation. The results showed that GUS driven by CPT, SRPP or REF promoter was expressed in leaves and stems, especially in the leaf vein and vascular bundle. The GUS activity in stems was higher than that in leaf. This study provided a basis for analyzing the biosynthesis mechanism of natural rubber and breeding new varieties of high yield natural rubber.
Peptide Elongation Factors/genetics*
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Plant Proteins/metabolism*
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Periploca/metabolism*
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Rubber
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Plant Breeding
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Cloning, Molecular
2.Genetic analysis of a rare fetus with mandibulofacial dysostosis Guion-Almeida type.
Lulu YAN ; Liyun TIAN ; Juan CAO ; Bihua ZHOU ; Yuxin ZHANG ; Yingwen LIU ; Chunxiao HAN ; Haibo LI
Chinese Journal of Medical Genetics 2021;38(8):791-794
OBJECTIVE:
To delineate the clinical and genetic features of a fetus with micrognathia, low-set ears, microtia, polyhydramnios and anechoic stomach by ultrasonography.
METHODS:
Whole exome sequencing (WES) was carried out to detect genetic variant in the fetus, for which routine chromosomal karyotyping and chromosomal microarray analysis (CMA) yielded no positive finding. Candidate variants were verified by Sanger sequencing and bioinformatic analysis.
RESULTS:
WES revealed that the fetus has carried a de novo nonsense c.2302C>T (p.Q768X) variant in exon 23 of the EFTUD2 gene, which was detected in neither parent. The variant was unreported previously and may lead to premature termination of the translation of EFTUD2 protein at the 768th amino acid. Bioinformatic analysis predicted the amino acid to be highly conserved and may alter the structure and function of the EFTUD2 protein.
CONCLUSION
The c.2302C>T variant of the EFTUD2 gene probably underlay the mandibulofacial dysostosis Guion-Almeida type in the fetus. Discovery of the novel variant has enriched variant spectrum of the EFTUD2 gene and provided a basis for genetic counseling and prenatal diagnosis for the family.
Female
;
Fetus
;
Humans
;
Mandibulofacial Dysostosis/genetics*
;
Mutation
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Peptide Elongation Factors/genetics*
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Phenotype
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Pregnancy
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Ribonucleoprotein, U5 Small Nuclear/genetics*
4.Detection of antibodies against glucose 6-phosphate isomerase in synovial fluid of rheumatoid arthritis using surface plasmon resonance (BIAcore).
Ji Yeon KIM ; Mi Hong LEE ; Kyung In JUNG ; Hye Young NA ; Hoon Suk CHA ; Eun Mi KO ; Tae Jin KIM
Experimental & Molecular Medicine 2003;35(4):310-316
We have used a surface plasmon resonance biosensor (SPR, BIACORE 2000) to detect antibodies against glucose 6-phosphate isomerase (GPI) in synovial fluids of rheumatoid arthritis (RA) and osteoarthritis (OA). Recombinant human GPI proteins fused with or without NusA were expressed in E. coli, purified to homogeneity and immobilized in flow cells of CM5 sensor chips. The flow cells immobilized with NusA protein or bovine serum albumin were used to monitor non-specific binding. Synovial fluid samples from RA patients showed a significantly higher level of binding to recombinant GPI proteins than samples from OA patients. Proteins which bound to the recombinant GPI proteins were confirmed to be immunoglobulin through the administration of anti-human immunoglobulin. NusA fusion protein was excellent for this assay because of a low background binding activity in the SPR analysis and its advantage of increased solubility in recombinant protein production. These results suggested a useful utilization of recombinant NusA-GPI fusion protein for the detection of autoantibodies against GPI in RA patients.
Aged
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Antibodies/*immunology
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Arthritis, Rheumatoid/*immunology
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Female
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Glucose-6-Phosphate Isomerase/genetics/*immunology/metabolism
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Human
;
Male
;
Middle Aged
;
Osteoarthritis/immunology
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Peptide Elongation Factors/genetics/metabolism
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Recombinant Fusion Proteins/genetics/metabolism
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Surface Plasmon Resonance
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Synovial Fluid/*immunology
;
Transcription Factors/genetics/metabolism