1.Identification of a novel HLA allele, HLA-B*35:03:07, by sequencing-based typing.
Pei-Cong ZHAI ; Yan LIU ; Yi ZHANG ; Xiang-Min NIE ; Yong-Hong SONG ; Yun-Long ZHUANG ; Chuan-Fu ZHU
Journal of Experimental Hematology 2012;20(4):1010-1013
This study was purposed to analyze and identify a novel HLA allele in Chinese population. A new HLA-B allele which is closely related to HLA-B*35:03:01 was initially detected by PCR-SSOP, then DNA sequencing was performed to identify the difference between the novel allele and HLA-B*35:03:01 allele. The result showed that the sequence of the new allele was different from all other known sequence. It differs from the closest matching HLA-B*35:03:01 by a single substitution at position 387 C→G in exon 3, no resulting in amino acid change. It is concluded that this allele is a novel one and has been officially named B*35:03:07 by the WHO Nomenclature Committee.
Alleles
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Asian Continental Ancestry Group
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genetics
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HLA-B Antigens
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genetics
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Humans
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Male
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Sequence Analysis, DNA
2.Analysis on Polymorphism of Platelet Antigen Gene in Shandong Han Population.
Yan LIU ; Hai-Feng ZHU ; Wen-Ben QIAO ; Yi ZHANG ; Yong-Hong SONG ; Xiang-Min NIE ; Chuan-Fu ZHU ; Pei-Cong ZHAI
Journal of Experimental Hematology 2020;28(6):2066-2070
OBJECTIVE:
To study the Polymorphism of the human platelet antigen(HPA) gene 1-17 and human leukocyte antigen(HLA) gene-A and B locus in Shandong Han population.
METHODS:
A total of 962 samples from routine voluntary platelet donors were genotyped for HPA1-17 system and HLA-A site, B by PCR-SSP and PCR-SSOP respectively.Gene frequencies were calculated by counting. HPA1-17 and HLA genotype combinations were analyzed by Arelequin 3.5.
RESULTS:
The gene frequencies of HPA-la, -1b, HPA-2a, -2b, HPA-3a, -3b, HPA-4a, -4b, HPA-5a, -5b, HPA-6a, -6b, HPA-15a, -15b were 0.9918, 0.0082, 0.9419, 0.0592, 0.5841, 0.4174, 0.9969, 0.0031, 0.9892, 0.0108, 0.9835, 0.0175,0.5488 and 0.4512, respectively. The most common HPA genotype combination was HPA-(1, 2, 4, 5, 6, 7-14, 16, 17) aa-3ab-15ab (0.2048). Moreover, HLA-A*2(0.3094) and HLA-B*13(0.1513) showed the highest frequency in their respective locus. The most common HLA genotype combination was HLA-A*2-B*13(0.1397) .
CONCLUSION
Distributions of HPA and HLA show high polymorphism in Shandong Han population. The ethnic and territorial difference of HPA distribution is also confirmed. It is imperative to establish local genetic database of volunteer platelet donors.
Alleles
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Antigens, Human Platelet/genetics*
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Gene Frequency
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Genotype
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Humans
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Polymorphism, Genetic