1.Horizontal gene transfer among nitrogen-fixing bacteria in the guts of termite Coptotermes gestroi
Sarannia Thanganathan ; Wendy Ying Ying Liu ; Kamariah Hasan
Malaysian Journal of Microbiology 2021;17(5):493-504
Aims:
Arthropods guts, such as termite harbor diverse microorganisms including those that are capable of fixing atmospheric nitrogen (N2). Nitrogen-fixing bacteria can help termite to overcome their shortage of dietary N by providing fixed N2. Nitrogenase enzyme is responsible for this trait and encoded by nif genes which are highly conserved and are primarily used in the identification of N2-fixing microorganisms. Here, we characterized N2-fixing bacteria isolated from the hindguts of termite Coptotermes gestroi.
Methodology and results:
A total of 46 bacterial isolates were obtained after a primary screening based on their ability to grow on Burk’s media. Subsequently, the nifH gene from two of these isolates, namely S7 and S20, were successfully amplified and sequenced. Molecular phylogenetic analysis of 16S rRNA gene sequence revealed that isolate S7 is closely related to Ralstonia pickettii ATCC27511 (99.34% similarity, 1059 bp), whereas isolate S20 is closely related to Microbacterium sp. NCCP-451 (LC488936) (99.06% similarity, 948 bp). Besides that, the recA gene of isolate S7 is closely related to Ralstonia pickettii 12D (CP001644) (100% similarity, 442 bp) and the type strain of Ralstonia pickettii (ATCC 27511) (NZ KN050646) (98.97% similarity, 438 bp). Meanwhile, nifH gene of isolate S7 showed highest similarity to the uncultured bacterium NR1606 (AF035490) (99.93% similarity, 277 bp). Moreover, the nifH gene of isolate S20 is clearly separated from Azoarcus sp. and distantly related to Microbacterium sp. The incongruence between the partial 16S rRNA and nifH gene sequences could indicate the possibility of horizontal transfer of nif genes.
Conclusion, significance and impact of study
The phylogenetic incongruence between housekeeping genes (16S rRNA and RecA) and nifH gene in these bacteria provides new insight on potential horizontal gene transfer (HGT) activity taking place in bacterial communities particularly in the guts of arthropods. The finding of this study on potential HGT can also aid in the prediction of origins and evolution of gene transfer among bacteria.
Nitrogen Fixation
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Nitrogenase
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Isoptera
3.Effects of different nitrogenous compounds on growth and nodulation of Abrus cantoniensis.
Rong-Shao HUANG ; Yong-Xiong YU ; Yan HU ; Xiao-Bang SHENG
China Journal of Chinese Materia Medica 2005;30(24):1906-1909
OBJECTIVEThe research aimed at the effects of different nitrogenous compounds on growth and nodulation of Abrus cantoniensis.
METHODAfter the seedlings of the herb were inoculated with rhizobia in potted culture, they were supplied with nutrition solutions which contained the three nitrogenous compounds, KNO3, NH4NO3, (NH4)2SO4 of different nitrogen concentration. The growth and nodulation of seedlings was determined after 70 days.
RESULTDifferent nitrogenous compounds were able to enhance the vegetable growth of seedlings variously. The effect of (NH4)2SO4 and NH4NO3 on growth was better than that of KNO3. Seedlings nodulation was obviously inhibited by these nitrogenous compounds. Their inhibitory effects ranked NH4NO3 > (NH4)2SO4 > KNO3. The treatments of KNO3 and the lower concentration treatments of NH4NO3 and (NH4)2 SO4 didn't inhibit the nodulation of seedlings, but the higher concentration treatment of NH4NO3 and (NH4)2SO4 severely inhibited nodulation or even made a no formation of nodule.
CONCLUSIONThe results showed that ammonium nitrogen the higher inhibitory ability to the nodulation of seedlings of A. cantoniensis than nitrate nitrogen. Therefore, the application of ammonium nitrogen fertilizer should be controlled in culture of the herb, which is in favor of increasing the function of biological nitrogen fixation and the quality of the medicinal materials of A. cantoniensis.
Abrus ; growth & development ; Ammonium Sulfate ; Biomass ; Fertilizers ; Nitrates ; Nitrogen Fixation ; physiology ; Plants, Medicinal ; growth & development ; Potassium Compounds ; Seedlings ; growth & development
4.Surgical Fitness for Trochanteric Fracture in Elderly: Prospective Study.
Gu Hee JUNG ; Jong Seo LEE ; Sung Gun HEO ; Jae Do KIM ; Hyun Ik CHO
Journal of the Korean Fracture Society 2014;27(4):261-266
PURPOSE: The purpose of this study was to evaluate the risks of undergoing intramedullary nailing with minimum surgical optimization (fast-track) for geriatric trochanter fracture due to fall from a standing height. MATERIALS AND METHODS: From May 2006 to August 2013, 48 fractures were enrolled in fast-track, and were an average age of patients was 77.6 years (range, 62-97 years). They underwent primary testing for anesthesia, including basic body fluid test, arterial blood, electrocardiography, and chest radiographs. The time from visit to surgery was 28.9 hours (range, 1-96 hours). RESULTS: During hospitalization, there was one case of stress-induced cardiac arrest; however, other complications, infection, and 30-day mortality did not occur. According to preoperative classic test, the average albumin was 3.45 g/dl, blood sugar, 169 mg/dl, blood urea nitrogen, 20.5 mg/dl, Cr, 1.5 mg/dl, Na, 135.3 mEq/L, and K, 4.21 mEq/L. The average PaCO2 of arterial blood was 37.6 mmHg. CONCLUSION: We found that the fast-track for trochanteric fracture due to slip-down was relatively safe, and could be considered as a therapeutic approach.
Aged*
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Anesthesia
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Blood Glucose
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Blood Urea Nitrogen
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Body Fluids
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Electrocardiography
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Femur*
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Fracture Fixation, Intramedullary
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Heart Arrest
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Hospitalization
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Humans
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Mortality
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Osteoporotic Fractures
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Prospective Studies*
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Radiography, Thoracic
5.Isolation and biological characteristics of rhizobia strains from Abrus cantoniensis.
Rong-shao HUANG ; Xiao-bang SHENG ; Yong-xiong YU
China Journal of Chinese Materia Medica 2005;30(13):971-977
OBJECTIVEThe research aimed at studying the biological characteristics of rhizobia isolated from Abrus cantoniensis.
METHODThe rhizobia strains, isolated from different environments in Guangxi, were studied for their growing characters and the generation time. They were also compared for survival capabilities under stresses caused by NaCl, pH, temperature, and different kinds and concentration of antibiotics.
RESULTThe strains obtained from A. cantoniensis in subtropical zone produced alkali in YMA medium, the average generation time was 14.8 hours, and thus they belong to slow-growing rhizobia. Rhizobia strains differed greatly in respect to tolerance of high temperature, adaptability of acidic environment and sensitivity to four antibiotics, but they had the same abilities of using different carbon and nitrogen sources. After 70 days from inoculated strains, the seedling formed nodules on the root (85.0%), and the dry matter of vine was increased by 51.1%.
CONCLUSIONThe rhizobia strains isolated from different ecological environments are good germplasm resources of tolerances to high temperature and acidic environment. The research will greatly help utilize the rhizobia resources and enhance the quality of crude drugs of medicinal leguminosae.
Abrus ; microbiology ; Anti-Bacterial Agents ; pharmacology ; Culture Media ; Hydrogen-Ion Concentration ; Nitrogen Fixation ; Plants, Medicinal ; microbiology ; Rhizobium ; drug effects ; growth & development ; isolation & purification ; Temperature