1.Frequency of different subtypes of spinocerebellar ataxia in the Han nationality of Hunan province in China.
Xing-wang SONG ; Bei-sha TANG ; Hong JIANG ; Lu SHEN ; Qian YANG ; Shu-sheng LIAO ; Qing-hua LI ; Jian-guang TANG
Journal of Central South University(Medical Sciences) 2006;31(5):702-705
OBJECTIVE:
To determine the frequency of different subtypes of spinocerebellar ataxias (SCAs) in the Han nationality of Hunan province in China.
METHODS:
The mutations of SCA1, SCA2, SCA3, SCA6, SCA7, SCA17, and dentatorulral-pallidoluysian (DRPLA) were detected with the polymerase chain reaction (PCR), denaturing polyacrylamide gel and DNA sequencing techniques in 139 autosomal dominant SCA families and 61 sporadic SCA patients.
RESULTS:
Of the 139 families, 11 (7.9%) were positive for SCA1, 9(6.5%) were positive for SCA2, 71 (51.1%) were positive for SCA3, 4 (2.9%) were positive for SCA6, 2 (1.4%) were positive for SCA7, and none was positive for SCA17 and DRPLA. There was 1 SCA2 patient, 3 SCA3 patients, 1 SCA6 patient in the 61 sporadic SCA patients.
CONCLUSION
The frequency of SCA3 is substantially higher than that of SCA1 and SCA2 in the autosomal dominant SCA patients in the Han nationality of Hunan province. SCA6 and SCA7 are rare subtypes.
Adolescent
;
Adult
;
Ataxin-1
;
Ataxin-3
;
Ataxin-7
;
Ataxins
;
Child
;
China
;
ethnology
;
DNA Mutational Analysis
;
Female
;
Humans
;
Male
;
Middle Aged
;
Nerve Tissue Proteins
;
genetics
;
Nuclear Proteins
;
genetics
;
Repressor Proteins
;
genetics
;
Spinocerebellar Ataxias
;
classification
;
diagnosis
;
genetics
;
Trinucleotide Repeats
;
genetics
2.Studies on the CAG repeat expansion in patients with hereditary spinocerebellar ataxia from Chinese Han.
Junling WANG ; Qian XU ; Lifang LEI ; Lu SHEN ; Hong JIANG ; Xiaohui LI ; Yafang ZHOU ; Jiping YI ; Jie ZHOU ; Xinxiang YAN ; Qian PAN ; Kun XIA ; Beisha TANG
Chinese Journal of Medical Genetics 2009;26(6):620-625
OBJECTIVETo investigate the CAG trinucleotide repeat expansion in spinocerebellar ataxia (SCA) types 1, 2, 3, 6, 7, 12, and 17 from Chinese Han.
METHODSThe pathological CAG triplet repeat expansions of the SCA1, SCA2, SCA3/Machado-Joseph disease (MJD), SCA6, SCA7, SCA12 and SCA17 genes were analyzed in a cohort of 559 Mainland Chinese patients affected by spinocerebellar ataxia, including 363 probands from families with autosomal dominant SCA and 196 sporadic cases. Polymerase chain reaction, agarose gel electrophoresis, recombinant DNA technology by T-vector cloning and direct sequencing were performed to detect the CAG-repeat number of abnormal allele.
RESULTSAmong the 559 SCA patients, twenty-three were positive for SCA1, the ranges of expanded CAG repeats were from 39 to 60 (mean:51.09+/-4.88); thirty-two were positive for SCA2, the ranges of expanded CAG repeats were from 36 to 51 (mean:40.34+/-4.40); three hundred and five were positive for SCA3/MJD, the ranges of expanded CAG repeats were from 49 to 86 (mean:73.84+/-5.07); nine were positive for SCA6, the ranges of expanded CAG repeats were from 23 to 29 (mean:25.56+/-1.94); twenty-seven were positive for SCA7, the ranges of expanded CAG repeats were from 38 to 71(mean:58.22+/-10.90); three were positive for SCA12, the ranges of expanded CAG repeats were from 51 to 52 (mean:51.33+/-0.58); and finally, two were positive for SCA17, the range of expanded CAG repeats were from 53 to 55 (mean:54.00+/-1.41).
CONCLUSIONThe 39 CAG repeats of SCA1, 49 CAG repeats of SCA3 and 51 CAG repeats of SCA12 are all the shortest known causative expanded alleles, while the 86 CAG repeats of SCA3/MJD is the largest full expanded allele that has never been reported. Furthermore, it is the first report of SCA17 subtype in Mainland Chinese and first research that established the abnormal reference standard of CAG repeat number of different subtypes of SCA in Chinese Han.
Adolescent ; Adult ; Aged ; Asian Continental Ancestry Group ; ethnology ; genetics ; Ataxin-7 ; Ataxins ; Base Sequence ; Child ; Child, Preschool ; Cohort Studies ; Humans ; Male ; Middle Aged ; Molecular Sequence Data ; Nerve Tissue Proteins ; genetics ; Protein Phosphatase 2 ; genetics ; Spinocerebellar Ataxias ; ethnology ; genetics ; Trinucleotide Repeat Expansion ; Young Adult
3.Construction of the eukaryotic expression vector of MJD1 and its expression in SH-SY5Y cells.
Jian-guang TANG ; Bei-sha TANG ; Lu SHEN ; Hong JIANG ; Zhi-ping HU ; Li CAO ; Kun XIA ; Fang CAI
Journal of Central South University(Medical Sciences) 2005;30(6):640-644
OBJECTIVE:
To construct the eukaryotic expression vector of MJD1 with normal copies of CAG trinucleotide repetition and MJD1 with CAG trinucleotide repetition expansion mutation respectively, and to determine whether the polyglutamine expansion in ataxin-3 could lead to the formation of intranuclear aggregation.
METHODS:
The coding sequence of wild-type MJD1 and mutant MJD1 was amplified by PCR from pAS2-1-MJD20Q and pAS2-1-MJD68Q respectively. After being digested with BamH I and Hind III, the PCR products were inserted into pcDNA3. 1-Myc-His(-) B. The recombinant plasmids pcDNA3.1-Myc-His(-) B-MJD20Q and pcDNA3.1-Myc-His(-) B-MJD68Q were identified by enzyme digestion analysis and DNA sequencing. The recombinant plasmid was transfected into SH-SYSY cells and the expression of MJD1 in the transfected cells was analyzed by Western blot. The immunofluorescence of the transfected cells was examined using a confocal microscope to observe the formation of intranuclear aggregation.
RESULTS:
Enzyme digestion analysis and DNA sequencing showed that the target gene was cloned into pcDNA3. 1-Myc-His(-) B. The expression of MJD1 in the transfected cells was confirmed by Western blot; The SH-SY5Y cells transfected with pcDNA3. 1-Myc-His(-) B-MJD68Q showed the formation of intranuclear aggregation, but the cells transfected with pcDNA3.1-Myc-His(-) B-MJD20Q did not show such phenomenon.
CONCLUSION
The eukaryotic expression vectors of MJD1 has been successfully constructed; The polyglutamine expansion in ataxin-3 could lead to the formation of intranuclear aggregation.
Ataxin-1
;
Ataxin-3
;
Ataxins
;
Base Sequence
;
Eukaryotic Cells
;
metabolism
;
Genetic Vectors
;
Humans
;
Mediator Complex
;
Molecular Sequence Data
;
Nerve Tissue Proteins
;
biosynthesis
;
genetics
;
Neuroblastoma
;
metabolism
;
pathology
;
Nuclear Proteins
;
biosynthesis
;
genetics
;
Plasmids
;
genetics
;
Receptors, Thyroid Hormone
;
genetics
;
Recombinant Proteins
;
biosynthesis
;
genetics
;
Repressor Proteins
;
biosynthesis
;
genetics
;
Transfection
;
Tumor Cells, Cultured
4.Analysis and application of SCA1 and SCA3/MJD gene CAG repeats in Han population in Northeastern China.
Miao JIANG ; Chun-lian JIN ; Chang-kun LIN ; Guang-rong QIU ; Zong-lan LIU ; Chao-xiang WANG ; Kai-lai SUN
Chinese Journal of Medical Genetics 2004;21(1):83-85
OBJECTIVETo investigate the normal range of (CAG)n in spinocerebellar ataxia type 1 (SCA1) gene and spinocerebellar ataxia type 3 (SCA3/MJD) gene in 110 normal subjects of Han population in Northeastern China, to assess the genotypes for clinically diagnosed spinocerebellar ataxia(SCA) individuals including 25 patients from 8 families and 6 sporadic patients, and to make presymptomatic and prenatal diagnosis.
METHODSDNA fragments from the normal subjects and the patients were detected by fluorescence-PCR. Homozygosities were selected for DNA sequencing.
RESULTSThe normal ranges of (CAG)n of SCA1 and SCA3/MJD were 20-39 and 14-38 repeats respectively, SCA1 was found mostly to be 26 and 27 repeats, allele frequency 34.09% and 20.91%; heterozygosity was 84.55%, SCA3/MJD was found mostly to be 14 repeats, allele frequency 39.55%, heterozygosity was 78.18%.(CAG)(68) of SCA3/MJD gene of one affected individual had been found in a family but no CAG mutative expansion in related members was observed.
CONCLUSIONThe normal ranges of CAG repeats vary with areas and races. SCAs genotyping is the first choice in presymptomatic and prenatal diagnosis.
Ataxin-1 ; Ataxin-3 ; Ataxins ; China ; DNA ; chemistry ; genetics ; Family Health ; Female ; Gene Frequency ; Genotype ; Humans ; Machado-Joseph Disease ; diagnosis ; genetics ; Male ; Nerve Tissue Proteins ; genetics ; Nuclear Proteins ; genetics ; Pedigree ; Repressor Proteins ; Sequence Analysis, DNA ; Spinocerebellar Ataxias ; diagnosis ; genetics ; Trinucleotide Repeat Expansion ; genetics ; Trinucleotide Repeats ; genetics
6.Copy number variation of trinucleotide repeat in dynamic mutation sites of autosomal dominant cerebellar ataxias related genes.
Pu CHEN ; Mingyi MA ; Huifang SHANG ; Dan SU ; Sizhong ZHANG ; Yuan YANG
Chinese Journal of Medical Genetics 2009;26(6):626-633
OBJECTIVETo standardize the experimental procedure of the gene test for autosomal dominant cerebellar ataxias (ADCA), and provide the basis for quantitative criteria of the dynamic mutation of spinocerebellar ataxia (SCA) genes in Chinese population.
METHODSGenotyping of the dynamic mutation loci of the SCA1, SCA2, SCA3, SCA6 and SCA7 genes was performed, using florescence PCR-capillary electrophoresis followed by DNA sequencing, to investigate the variation range of copy number of CAG tandem repeat of the genes in 263 probands of ADCA pedigrees and 261 non-related normal controls. Based on the sequencing result, the bias of the CAG copy number estimation using capillary electrophoresis with different DNA controls was compared to analyze the technical detailes of the electrophresis method in testing the dynamic mutation sites.
RESULTSPCR products containing dynamic mutation loci of the SCA genes showed significantly higher mobility than that of molecular weigh marker with relatively balanced GC content. This was particularly obvious in the SCA2, SCA 6 and SCA7 genes whereas the deviation of copy number could be corrected to +/-1 when known CAG copy number fragments were used as controls. The mobility of PCR products was primarily related to the copy number of CAG repeat when the fragments contained normal CAG repeat. In the 263 ADCA pedigrees, 6 (2.28%) carried SCA1 gene mutation, 8 (3.04%) had SCA2 mutation and 81 (30.80%) harbored SCA3 mutation. The gene mutation of SCA6 and SCA7 was not found. The normal variation range of the CAG repeat was 17-36 copies in SCA1 gene, 13-30 copies in SCA2, 14-39 copies in SCA3, 6-16 copies in SCA6 and 6-13 copies in SCA7. The heterozygosity was 76.1%, 17.7%, 74.4%, 72.1% and 41.3%, respectively. The mutation range of the CAG repeat was 49-56 copies in SCA1 gene, 36-41 copies in SCA2, 59-81 copies in SCA3. Neither homozygous mutation of an SCA gene nor double heterozygous mutation of the SCA genes was observed in the study.
CONCLUSIONThe copy number of the CAG repeat in SCA genes could be calculated accurately based on the result of florescence PCR-capillary electrophoresis when limited amount of known repeat copy number controls were used. Our result supported that the notion that SCA3 gene mutation was the most common cause for ADCA, and the obtained data would be helpful for establishing quantitative criteria of the dynamic mutation of the SCA genes in Chinese.
Adolescent ; Adult ; Aged ; Ataxin-7 ; Ataxins ; Base Sequence ; Calcium Channels ; genetics ; Cerebellar Ataxia ; genetics ; Gene Dosage ; Genes, Dominant ; Genetic Variation ; Humans ; Male ; Middle Aged ; Molecular Sequence Data ; Mutation ; Nerve Tissue Proteins ; genetics ; Trinucleotide Repeats ; Young Adult
7.Cloning, expression and purification of neural specific HuD cDNA.
Jian-hua CHEN ; Xiu-qin LIU ; Yu-pu GUO ; Bin ZHANG ; Yan ZHOU ; Xiao-yan HU ; Jian-gang YUAN ; Bo-qin QIANG ; Xiao-zhong PENG
Acta Academiae Medicinae Sinicae 2002;24(3):250-253
OBJECTIVETo prokaryoticly express and purify HuD protein and its RNA recognition motifs.
METHODSHuD protein was prokaryoticly expressed and purified by molecular cloning technology. Its biologic activity was testified by Western Blot.
RESULTSPurified HuD protein and its RNA recognized motifs were observed.
CONCLUSIONSThe result might aid for basic research and clinical application.
Antibodies, Antinuclear ; biosynthesis ; genetics ; isolation & purification ; Carcinoma, Small Cell ; genetics ; immunology ; metabolism ; Cloning, Molecular ; DNA, Complementary ; genetics ; ELAV Proteins ; ELAV-Like Protein 4 ; Humans ; Lung Neoplasms ; genetics ; immunology ; metabolism ; Nerve Tissue Proteins ; biosynthesis ; genetics ; isolation & purification ; Neurons ; immunology ; Paraneoplastic Syndromes, Nervous System ; genetics ; immunology ; metabolism ; RNA-Binding Proteins ; biosynthesis ; genetics ; isolation & purification
8.Expressions of Sca-1, CD24 and Muc1 in quiescent mammary glands of female rats.
Jin-Quan CHEN ; Jun LIU ; Jing AN
Journal of Southern Medical University 2007;27(4):488-491
OBJECTIVETo investigate the expressions of the stem cell antigen-1 (Sca-1), Mucin1 (Muc1) and CD24 in quiescent mammary glands of female rats.
METHODSThe expressions of CD24 and Sca-1 were detected in 6- and 9-week-old female rat mammary gland by Western blotting. Sections (4 microm) of 6- and 9-week-old female SD rat mammary gland were prepared to observe the expressions of Sca-1, Muc1 and CD24 by immunohistochemical labeling and immunofluorescence labeling.
RESULTSCD24 and Sca-1 in the mammary glands were expressed at lower level in 6-week-old female rats than in 9-week-old female rats. Sca-1 expression was detected in the mammary gland ductus, branching ductus, and areas surrounding the gland alveolus; CD24 was expressed in the mammary gland branching ductus and fat pads, and also the regions surrounding the gland alveolus. Muc1 expression was localized in the mammary gland ductus and branching ductus.
CONCLUSIONSSca-1-, CD24- and Muc1-positive cells may represent mammary gland progenitor cells, mammary gland stem cells, and mammary gland mature epithelium cells, respectively. This study provides some morphological evidences for identifying these cells, but they still need further verifications in cellular transplantation experiments.
Animals ; Ataxin-1 ; Ataxins ; CD24 Antigen ; metabolism ; Female ; Gene Expression Profiling ; Mammary Glands, Animal ; metabolism ; Mucin-1 ; metabolism ; Nerve Tissue Proteins ; metabolism ; Nuclear Proteins ; metabolism ; Rats
9.Molecular and prenatal diagnosis of a pedigree with spinocerebellar ataxia.
Dong-hua CAO ; Mei-hong REN ; Xiao-li LIU ; Chun-lian JIN ; Zhao-yi MENG ; Guang-bin QIU
Chinese Journal of Medical Genetics 2010;27(3):320-323
OBJECTIVETo identify the type of a pedigree with spinocerebellar ataxia, and carry out asymptomatic carrier detection and prenatal diagnosis.
METHODSThe blood samples of two patients in the spinocerebellar ataxia pedigree were collected. Based on the clinical characteristics of the pedigree and the disease incidence in China, the regions containing the CAG repeat of the SCA1, SCA2 and SCA3/MJD genes were amplified by polymerase chain reaction (PCR). The numbers of CAG repeats in the normal and abnormal allele fragments were identified by using agarose gel electrophoresis and DNA sequencing. We further carried out tests on the children of the patients and fetus to identify the presence of the abnormal allele.
RESULTSThe numbers of CAG repeat in the SCA1 and SCA2 genes were in the normal range. The CAG repeat number in one allele of SCA3/MJD gene was in the normal range, while that in the other allele was in the abnormal range. One of the children of the patients and the fetus carried the abnormal allele.
CONCLUSIONIt was confirmed that the pedigree was SCA3/MJD by gene diagnosis. One of the children of the patients was asymptomatic carrier and the fetus also carried the abnormal allele.
Ataxin-3 ; Ataxins ; Female ; Genetic Predisposition to Disease ; Humans ; Male ; Middle Aged ; Nerve Tissue Proteins ; genetics ; Nuclear Proteins ; genetics ; Pedigree ; Polymerase Chain Reaction ; Pregnancy ; Prenatal Diagnosis ; methods ; Repressor Proteins ; genetics ; Spinocerebellar Ataxias ; genetics