1.A mutation 1633-26(C-->A) in EXT1 gene causes multiple exostoses.
Zhi-guo XIE ; Zheng-mao HU ; Qian PAN ; Rui-fang ZHANG ; De-sheng LIANG ; Ling-qian WU ; Zhi-gao LONG ; He-ping DAI ; Kun XIA ; Jia-hui XIA
Chinese Journal of Medical Genetics 2006;23(2):147-150
OBJECTIVETo study the gene mutation in a patient with multiple exostoses, identify the disease-causing gene mutation.
METHODSPolymerase chain reaction and DNA sequencing were used to screen the EXT1 or EXT2 gene mutation, while mismatch primer amplification and restriction endonuclease digestion were performed to confirm the mutation.
RESULTSBy DNA sequencing, a mutation in the seventh intron was detected and located at 26 bp of 3' splice site upstream in EXT1 gene, which was unreported before. Mismatch primer amplification and restriction fragment length polymorphism analysis suggested that this mutation was not detected in the normal control.
CONCLUSIONThe mutation 1633-26(C-->A) may be the disease-causing mutation in this patient with multiple exostoses.
DNA Mutational Analysis ; Exostoses, Multiple Hereditary ; genetics ; Female ; Humans ; Mutation ; N-Acetylglucosaminyltransferases ; genetics ; Young Adult
4.Analysis of EXT1 and EXT2 gene mutations in two Chinese pedigrees affected with hereditary multiple exostosis.
Ying BAI ; Ning LIU ; Shuang HU ; Qinghua WU ; Xiangdong KONG
Chinese Journal of Medical Genetics 2019;36(5):451-455
OBJECTIVE:
To detect EXT1 and EXT2 gene mutations in two pedigrees affected with hereditary multiple exostosis (HME).
METHODS:
The coding regions and exon/intron boundaries of the EXT1 and EXT2 genes were analyzed by targeted next-generation sequencing (NGS). Suspected mutations were confirmed by Sanger sequencing of the probands, their family members and 200 unrelated healthy controls. Gross deletion was confirmed by quantitative PCR (qPCR) analysis and multiple ligation-dependent probe amplification (MLPA) analysis.
RESULTS:
Two mutations were detected in the pedigrees, which included EXT2 gene c.337_338insG mutation in pedigree 1 and deletion of entire EXT1 in pedigree 2. Analysis of sequencing data revealed that a novel heterozygous mutation (c.337_338insG) in EXT2 gene in proband 1 and his father. The same mutation was not found among healthy family members and 200 unrelated healthy controls. As shown by NGS and MLPA analysis, proband 2 carried a heterozygous deletion of entire EXT1 gene. The same deletion was also found in her mother by qPCR.
CONCLUSION
Mutations of the EXT1 and EXT2 genes probably underlie the HME in both pedigrees. NGS combined with Sanger sequencing, qPCR and MLPA is effective for attaining the diagnosis.
DNA Mutational Analysis
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Exostoses, Multiple Hereditary
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genetics
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Female
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Humans
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Mutation
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N-Acetylglucosaminyltransferases
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genetics
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Pedigree
5.O-GlcNAc transferase regulates centriole behavior and intraflagellar transport to promote ciliogenesis.
Fan YU ; Te LI ; Yanchao SUI ; Qingxia CHEN ; Song YANG ; Jia YANG ; Renjie HONG ; Dengwen LI ; Xiumin YAN ; Wei ZHAO ; Xueliang ZHU ; Jun ZHOU
Protein & Cell 2020;11(11):852-857
6.Genetic diagnosis for a Chinese Han family with hereditary multiple osteochondromas.
Xue-shuang HUANG ; Jian-shu LIU ; Hai-ou JIANG ; Qing-li QUAN ; Xiao-qing SHEN
Chinese Journal of Medical Genetics 2013;30(6):645-648
OBJECTIVETo identify the genetic cause for a Chinese Han family affected with hereditary multiple osteochondromas.
METHODSTwo patients, five unaffected relatives of the family and 100 unrelated healthy controls were collected. The coding sequences and intron/exon boundaries of EXT1 gene were amplified with polymerase chain reaction (PCR) and sequenced.
RESULTSA heterozygous c.600G>A (p.Trp200X) mutation in exon 1 of the EXT1 gene was detected in the patients. The same mutation was not found in unaffected family members and 100 healthy controls.
CONCLUSIONThe hereditary multiple osteochondromas in the family is caused by a nonsense mutation (p.Trp200X) in the EXT1 gene.
Asian Continental Ancestry Group ; genetics ; Child ; Exostoses, Multiple Hereditary ; diagnosis ; genetics ; Female ; Heterozygote ; Humans ; Male ; Mutation ; N-Acetylglucosaminyltransferases ; genetics ; Pedigree
7.Mutation analysis and prenatal diagnosis of EXT1 gene mutations in Chinese patients with multiple osteochondromas.
Hai-Yan ZHU ; Ya-Li HU ; Ying YANG ; Xing WU ; Rui-Fang ZHU ; Xiang-Yu ZHU ; Hong-Lei DUAN ; Ying ZHANG ; Jin-Yong ZHOU
Chinese Medical Journal 2011;124(19):3054-3057
BACKGROUNDMultiple osteochondromas (MO), an inherited autosomal dominant disorder, is characterized by the presence of multiple exostoses on the long bones. MO is caused by mutations in the EXT1 or EXT2 genes which encode glycosyltransferases implicated in heparin sulfate biosynthesis.
METHODSIn this study, efforts were made to identify the underlying disease-causing mutations in patients from two MO families in China.
RESULTSTwo novel EXT1 gene mutations were identified and no mutation was found in EXT2 gene. The mutation c.497T > A in exon 1 of the EXT1 gene was cosegregated with the disease phenotype in family 1 and formed a stop codon at amino acid site 166. The fetus of the proband was diagnosed negative. In family 2, the mutation c.1430-1431delCC in exon 6 of the EXT1 gene would cause frameshift and introduce a premature stop codon after the reading frame being open for 42 amino acids. The fetus of this family inherited this mutation from the father.
CONCLUSIONSMutation analysis of two MO families in this study demonstrates its further application in MO genetic counseling and prenatal diagnosis.
Adult ; Asian Continental Ancestry Group ; genetics ; Child, Preschool ; Exostoses, Multiple Hereditary ; genetics ; Female ; Humans ; Male ; Mutation ; N-Acetylglucosaminyltransferases ; genetics
8.A splicing mutation of EXT1 in a Chinese pedigree with hereditary multiple exostoses.
Wei WANG ; Zheng-Qing QIU ; Hong-Mei SONG
Chinese Journal of Contemporary Pediatrics 2014;16(2):174-180
OBJECTIVEHereditary multiple exostoses (HME) is an autosomal dominant monogenic disorder of paraplasia ossium. Mutations in EXT1 and EXT2 have been suggested to be responsible for over 70% of HME cases. This study aimed to analyze the clinical features and pathogenic mutations in a Chinese family with HME (6 patients in 24 members of 3 generations) and to review the relative literature regarding mutations in EXT1 and EXT2 in the Chinese population.
METHODSClinical pedigree dada from a Chinese family of HME were collected and analysed. EXT gene mutations in this pedigree assessed by PCR and sequencing. Pubmed and Wanfang (a Chinese database) were searched for the literature related to gene mutations in Chinese HME patients.
RESULTSIn the pedigree analyzed, the age of onset of HME was becoming younger, the disease was becoming more severe, and the number of osteochondromas was increasing, in successive generations. A splicing mutation IVS5+1G>A, first identified in Chinese population, was found in all diseased members of this pedigree. According the currently available literature, EXT1 and EXT2 mutations have been detected in 29% (26/90) and 43% (39/90) Chinese families with HME.
CONCLUSIONSHME starts earlier and becomes more severe and extensive with each successive generation in members of the pedigree analyzed. A splicing mutation, IVS5+1G>A, of EXT1, first identified in Chinese population, may be responsible for HME in the studied pedigree. EXT1 and EXT2 mutation rates may be different between the Chinese and Western populations.
Adolescent ; Adult ; Aged ; Alternative Splicing ; Exostoses, Multiple Hereditary ; genetics ; Female ; Humans ; Male ; Middle Aged ; Mutation ; N-Acetylglucosaminyltransferases ; genetics ; Pedigree
9.Potential coordination role between O-GlcNAcylation and epigenetics.
Donglu WU ; Yong CAI ; Jingji JIN
Protein & Cell 2017;8(10):713-723
Dynamic changes of the post-translational O-GlcNAc modification (O-GlcNAcylation) are controlled by O-linked β-N-acetylglucosamine (O-GlcNAc) transferase (OGT) and the glycoside hydrolase O-GlcNAcase (OGA) in cells. O-GlcNAcylation often occurs on serine (Ser) and threonine (Thr) residues of the specific substrate proteins via the addition of O-GlcNAc group by OGT. It has been known that O-GlcNAcylation is not only involved in many fundamental cellular processes, but also plays an important role in cancer development through various mechanisms. Recently, accumulating data reveal that O-GlcNAcylation at histones or non-histone proteins can lead to the start of the subsequent biological processes, suggesting that O-GlcNAcylation as 'protein code' or 'histone code' may provide recognition platforms or executive instructions for subsequent recruitment of proteins to carry out the specific functions. In this review, we summarize the interaction of O-GlcNAcylation and epigenetic changes, introduce recent research findings that link crosstalk between O-GlcNAcylation and epigenetic changes, and speculate on the potential coordination role of O-GlcNAcylation with epigenetic changes in intracellular biological processes.
Acetylglucosamine
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metabolism
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Animals
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Epigenesis, Genetic
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Glycoside Hydrolases
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metabolism
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Humans
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N-Acetylglucosaminyltransferases
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metabolism
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Neoplasms
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genetics
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metabolism
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Protein Processing, Post-Translational
10.Analysis of a multiple osteochondroma case caused by novel splice mutation (c.1164+1G to A) of EXT1 gene.
Xiaoyan GUO ; Wenxu CHEN ; Mingrui LIN ; Tengfei SHI ; Dianhua HUANG ; Zhihong WANG
Chinese Journal of Medical Genetics 2017;34(3):411-415
OBJECTIVETo detect potential mutation of EXT1 gene in a pedigree affected with multiple osteochondroma and explore its pathogenic mechanism.
METHODSThe coding regions and their flanking sequences of the EXT1/EXT2 genes were subjected to PCR amplification and Sanger sequencing. Suspected mutations were verified by excluding possible single nucleotide polymorphisms and bioinformatics analysis. Transcripts of the EXT1 gene in the proband were analyzed by TA clone-sequencing, with its abundance compared with that of healthy controls.
RESULTSDNA sequencing has identified in the proband a novel heterozygous point mutation (c.1164+1G to A) at the 5'splice sites of intron 3 of the EXT1 gene. The same mutation was not found in the healthy controls. Bioinformatics analysis indicated that the mutation is highly conserved and can lead to skipping of exon 3 or aberrant splicing. TA clone-sequencing indicated that the numbers of transcripts with skipping of exon 3 has significantly increased in the proband (< 0.05) compared with the controls.
CONCLUSIONThe c.1164+1G to A mutation has resulted in skipping of exon 3 in a proportion of EXT1 gene transcripts. As the result, the number of transcripts with tumor suppressing function is relatively reduced and has ultimately led to the tumors.
Adult ; Base Sequence ; Child ; Exostoses, Multiple Hereditary ; genetics ; Female ; Humans ; Male ; Molecular Sequence Data ; N-Acetylglucosaminyltransferases ; genetics ; Point Mutation ; RNA Splice Sites ; RNA Splicing