1.Quantitative estimation of dust fall and smoke particles in Quetta Valley.
Muhammad SAMI ; Amir WASEEM ; Sher AKBAR
Journal of Zhejiang University. Science. B 2006;7(7):542-547
Tightening of air quality standards for populated urban areas has led to increasing attention to assessment of air quality management areas, where violation of air quality standards occurs, and development of control strategies to eliminate such violation of air quality standards. The Quetta urban area is very densely built and has heavy motorized traffic. The increase of emissions mainly from traffic and industry are responsible for the increase in atmospheric pollution levels during the last years. The dust examined in the current study was collected by both deposit gauge and Petri dish methods at various sites of Quetta Valley. Smoke particles were obtained by bladder method from the exhausts of various types of motor vehicles. The concentration of lead found in the smoke ranged from 1.5x10(-6) to 4.5x10(-6).
Air Pollution
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analysis
;
Cities
;
statistics & numerical data
;
Dust
;
analysis
;
Environmental Monitoring
;
methods
;
Pakistan
;
Particle Size
;
Smoke
;
analysis
;
Vehicle Emissions
;
analysis
2.Inflamatory Pseudotumor of the Bladder: A Histopathological Diagnostic Challenge from Its Malignant Variant
Muhammad Akbar ; Praveen S ; Christopher HCK ; Goh EH ; Swaminathan ; Zulkifli MZ
Journal of Surgical Academia 2012;2(1):46-49
Inflammatory Pseudotumor (IP) of bladder is one of a variety of lesions which may arise from spindle cell lesions in the bladder. It is benign in nature compared to the other end of the spectrum of spindle cell lesions, such as sarcoma, sarcomatoid carcinoma and leiomyosarcoma. The diagnosis of IP and its differentiation from a malignant pathology is a diagnostic dilemma for Urologist and Pathologist as both entities share certain similar morphological and histo-pathological appearance as well as immuno-histo chemistry staining. It is however crucial to avoid misdiagnosis as the treatment option varies significantly between a radical or partial cystectomy with future surveillance cystoscopes. Hereby, we highlight a case of a benign variant of spindle cell tumour of bladder which needed second pathology review for confirmation and thus avoiding a radical cystectomy. We also review the literature on its presentation and emphasis characteristics differentiating a benign from a malignant pathology.
3.Validating a point of care lactate meter in adult patients with sepsis presenting to the emergency department of a tertiary care hospital of a low- to middle-income country
Baig Akbar MUHAMMAD ; Shahzad HIRA ; Hussain ERFAN ; Mian ASAD
World Journal of Emergency Medicine 2017;8(3):184-189
BACKGROUND: Timely identification of high blood lactate levels in septic patients may allow faster detection of those patients requiring immediate resuscitation. Point-of-care (POC) testing is being increasingly utilized in the emergency department (ED). We examined the accuracy and time-saving effect of a handheld POC lactate device for the measurement of fingertip and whole blood lactate as compared with reference laboratory blood testing in septic ED patients. METHODS: A convenience sample of adult ED patients receiving serum lactate testing were enrolled prospectively in the ED of a multidisciplinary tertiary care hospital serving the population of one of the major cities of Pakistan. Participants underwent fingertip POC lactate measurement with a portable device and simultaneous whole blood sampling for analysis by both the POC lactate device and standard laboratory method. Lactate measurements were compared by intraclass correlation (ICC) and Bland and Altman plots. RESULTS: Forty-three septic patients were included in the study. The fingertip POC & whole blood POC lactate measurements each correlated tightly with the reference method (ICC=0.93& ICC=0.92, respectively). Similarly at 6 hours, the fingertip POC & whole blood POC lactate measurements demonstrated satisfactory correlation with the reference method (ICC=0.95 &ICC=0.97, respectively). CONCLUSION: Fingertip POC lactate measurement is an accurate method to determine lactate levels in septic ED patients.
4.Validity and Reliability of Prognosis Brachial Plexus Injury Score for Traumatic Brachial Plexus Injury
Heri SUROTO ; Muhammad Rifqi FARIZAN AKBAR ; Dina APRILYA ; Firman PRIBADI
Clinics in Orthopedic Surgery 2023;15(1):153-158
Background:
Brachial plexus injury (BPI) is a peripheral nerve injury that results in severe functional impairment and disability. Even after prompt treatment, predicting the prognosis of BPI is not easy as it involves various factors. An objective and valid scoring system would aid clinicians in informing families and anticipating problems related to the recovery of BPI. Prognosis BPI (PRO-BPI) score, a new prognostic score to predict the outcome of traumatic BPI (TBPI), was developed in 2019 by Suroto and Rahman. This study aimed to evaluate its validity and reliability.
Methods:
Retrospective cohort analysis was conducted for 111 BPI patients. A serial assessment of Disabilities of the Arm, Shoulder and Hand (DASH) score and PRO-BPI score was done. Validity analysis was done by assessing Spearman correlations between PRO-BPI score and other scoring systems (DASH, Michigan hand outcomes, and 36-item short form survey score [SF-36]). Internal structure consistency using Cronbach’s alpha and test-retest reliability were measured for reliability analyses. A p-value was considered significant if < 0.05.
Results:
A total of 96 male and 15 female patients were included in our study with a mean age of 27.9 ± 10.6 years. Most of the patients (56.75%) had a poor prognosis based on the scoring system (average, 14.38 ± 3.98). Major contributors of this low score were the persistent pain (score 1 in 57.7% patients) and initial pain scale score (score 1 in 31.5% patients). Validity test showed that 6 parameters were all valid (p < 0.01). Reliability testing was done using Cronbach’s alpha and found acceptable internal consistency (α = 0.767). Test-retest reliability was high. Moderate correlations were observed between the measures.
Conclusions
PRO-BPI score is a valid and reliable scoring system in predicting the prognosis of TBPI.
5.Inhibition of indoxyl sulfate-induced intrarenal renin-angiotensin system activation: targeting the aryl hydrocarbon receptor.
Translational and Clinical Pharmacology 2017;25(3):114-116
Indoxyl sulfate, a protein-bound uremic toxin, leads to CKD (chronic kidney disease) progression and its complications through the activation of AhR (aryl hydrocarbon receptor) and RAS (renin-angiotensin system). Inhibition of these pathways may slow the development of CKD and CKD-associated complications.
Indican
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Kidney
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Receptors, Aryl Hydrocarbon*
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Renal Insufficiency, Chronic
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Renin-Angiotensin System*
6.Clinical manifestations and pregnancy outcomes of COVID-19 in indonesian referral hospital in central pandemic area
Muhammad Ilham Aldika AKBAR ; Khanisyah Erza GUMILAR ; Rino ANDRIYA ; Manggala Pasca WARDHANA ; Pungky MULAWARDHANA ; Jimmy Yanuar ANAS ; Ernawati ; Muhammad Ardian Cahya LAKSANA ; Gustaaf DEKKER
Obstetrics & Gynecology Science 2022;65(1):29-36
Objectives:
Data on the clinical manifestations and pregnancy outcomes of pregnant women with COVID-19 are limited, particularly in developing countries. The aim of this study was to analyze the clinical manifestations and pregnancy outcomes in COVID-19 maternal cases in a large referral hospital in Indonesia.
Methods:
This study used a prospective cohort design and included all pregnant women with suspected COVID-19. Subjects were divided into COVID-19 and non-COVID-19 groups based on the results of real-time polymerase chain reaction (RT-PCR) for severe acute respiratory syndrome coronavirus 2. Clinical characteristics, laboratory results, and pregnancy outcomes were compared between the two groups.
Results:
Of the 141 suspected maternal cases, 62 cases were COVID-19-confirmed (43.9%), while 79 suspected cases were negative (56.1%). The clinical manifestations and laboratory findings between the two groups were not significantly different (P>0.05). However, the maternal mortality directly caused by COVID-19 was significantly higher than that in the non-COVID-19 group (8.3% vs. 1.3%; P=0.044; odd ratio, 6.91; 95% confidence interval, 0.79-60.81).
Conclusion
The clinical manifestations and laboratory results of suspected pregnant women with positive and negative RT-PCR COVID-19 results were similar. However, within the Indonesian setting, COVID-19 significantly increases the risk of maternal death through both direct and indirect factors.
7.Preventable Lifestyle Risk Factors for Non-Communicable Diseases in the Pakistan Adolescents Schools Study 1 (PASS-1).
Ali Khan KHUWAJA ; Saleem KHAWAJA ; Komal MOTWANI ; Adeel Akbar KHOJA ; Iqbal Syed AZAM ; Zafar FATMI ; Badar Sabir ALI ; Muhammad Masood KADIR
Journal of Preventive Medicine and Public Health 2011;44(5):210-217
OBJECTIVES: The rising burden of preventable risk factors for non-communicable diseases (NCDs) among adolescents is a major public health challenge worldwide. We identified the preventable risk factors for NCDs in adolescents. METHODS: In a school-based study, pre-tested structured questionnaires were completed by 414 adolescents (14 to 17 years) at six schools in three cities in Pakistan. The chi-squared test and adjusted odds ratio (aOR) with 95% confidence interval (CI) were calculated in a multinomial logistic regression analysis. RESULTS: Over 80% of the adolescents had unhealthy diets, and 54% were physically inactive. Most adolescents were exposed to passive smoking, and 14% were also current smokers. More than one-third of participants chewed betel nut, and one-quarter used oral tobacco. More girls were physically inactive (OR, 4.07; 95% CI, 2.69 to 6.17), whereas a greater proportion of boys were current smokers (OR, 2.17; 95% CI, 1.19 to 3.91), exposed to passive smoking (OR, 2.57; 95% CI, 1.72 to 3.83), and using betel nut (OR, 2.03; 95% CI, 1.34 to 3.06). Only 3.1% of the participants were without any preventable lifestyle risk factor for NCDs, and over 80% had > or =2 factors. Co-existence of risk factors was independently associated with fathers being blue-collar workers (aOR, 3.57; 95% CI, 1.07 to 11.92) and parents not treating their child fairly (aOR, 5.05; 95% CI, 1.29 to 19.78). CONCLUSIONS: Most of the adolescents studied had preventable risk factors for NCDs. These results warrant comprehensive and integrated interventions to prevent lifestyle risk factors, and parents are front-line stakeholders.
Adolescent
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Female
;
Humans
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*Life Style
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Logistic Models
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Male
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Motor Activity
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Odds Ratio
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Pakistan
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Questionnaires
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Risk Factors
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Schools
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Smoking/*prevention & control
;
Tobacco, Smokeless
8.Evaluation of type 2 diabetes risk variants (alleles) in the Pashtun ethnic population of Pakistan
Asif Jan ; Muhammad Saeed ; Zakiullah ; Rani Akbar ; Hamayun Khan
Journal of the ASEAN Federation of Endocrine Societies 2023;38(S1):48-54
Objective:
To evaluate the Type 2 Diabetes (T2D) risk variants in the Pashtun ethnic population of Khyber Pakhtunkhwa using nascent whole-exome sequencing (WES) to better understand the pathogenesis of this complex polygenic disorder.
Methodology:
A total of 100 confirmed patients with T2D of Pashtun ethnicity were included in the study, DNA was extracted from whole blood samples, and paired-end libraries were prepared using the Illumina Nextera XT DNA library kit carefully following the manufacturer’s instructions. Illumina HiSeq 2000 was used to obtain sequences of the prepared libraries followed by bioinformatics data analysis.
Results:
A total of n=11 pathogenic/likely pathogenic variants were reported in the CAP10, PAX4, IRS-2, NEUROD1, CDKL1 and WFS1. Among the reported variants CAP10/rs55878652 (c.1990-7T>C; p.Leu446Pro) and CAP10/rs2975766 (c.1996A>G; p.Ile666Val) identified were novel, and have not yet been reported for any disease in the database. The variants CAP10/rs7607759 (c.1510A>G, p.Thr504Ala), PAX4/rs712701 (c.962A>C; p.His321Pro), PAX4/ rs772936097 (c.748-3delT; p.Arg325Trp), IRS-2/rs1805097 (c.3170G>A; p.Gly1057Asp), NEUROD1/rs1801262 (c.133A>G; p.Thr45Ala), CDKL1/rs77152992 (c.1226C>T; p.Pro409Leu), WFS1/rs1801212 (c.997G>A; p.Val333Ile), WFS1/rs1801208 (c.1367G>A; p.Arg456His), and WFS1/rs734312 (c.1832G>A; p.Arg611His) are previously identified in other ethnic populations. Our study reconfirms the associations of these variants with T2D in the Pakistani Pashtun population.
Conclusion
In-silico analysis of exome sequencing data suggests a statistically substantial association of all (n=11)
identified variants with T2D in the Pashtun ethnic population. This study may serve as a foundation for performing
future molecular studies aimed at unraveling T2D associated genes.
type 2 diabetes
;
bioinformatics
;
whole exome sequencing
9.Early experience with the novel glaucoma shunt device: Paul glaucoma implant in the Indonesian populations
Emma RUSMAYANI ; Viona VIONA ; Iwan SOEBIJANTORO ; Rini SULASTIWATY ; Arini Safira Nurul AKBAR ; Muhammad YOSERIZAL ; Zeiras Eka DJAMAL ; Widya Artini WIYOGO
International Eye Science 2023;23(10):1603-1608
AIM: To investigate the safety and efficacy of Paul glaucoma implant(PGI)in the short-term follow-up period and share first experience with this novel aqueous shunt in Indonesian populations.METHODS: A total of 21 patients(22 eyes)with PGI implants from April 2022 to December 2022 and with at least a complete 2mo follow-up were retrospectively analyzed. The primary outcome measure was failure, defined as intraocular pressure(IOP)out of the target range of 21 mmHg or less than 20% reduction from baseline for 2 consecutive visits, other glaucoma surgeries required, or removal of the implant.RESULTS: The follow-up period was 2 to 6mo. The mean IOP reduction was 52.27±22.94%, with a range of 9% to 90%. The complete success rate was 59%, and patients with or without a history of glaucoma surgery had 50% and 59% of complete success rates, respectively. Complications of the surgery were diplopia(n=2), early hypotony(n=1), hyphema(n=1), and exposed tube(n=2).CONCLUSION: The complete success of the PGI implantation was 57%. No serious postoperative complications were found in our cases. One case of hypotony resolved in the early postoperative period.
10.Poverty-associated emerging infection of Cystic Echinococcosis in population of Northern Pakistan: A hospital based study
Khan, A. ; Ahmed, H. ; Simsek, S. ; Gondal, M.A. ; Afzal, M.S. ; Irum, S. ; Muhammad, I. ; Mansur, H. ; Fatima, A. ; Ali, M.S. ; Riaz, N. ; Akbar, A. ; Weiping, W. ; Yayi, G.
Tropical Biomedicine 2019;36(2):324-334
Cystic Echinococcosis (CE) is one of the most important zoonotic parasitic diseases
in human, livestock, and wildlife globally. The prevalence of CE depends upon human behavioral
risk factors, the diversity and ecology of animal host interactions and the genetic diversity
within Echinococcus species which differ in their zoonotic potential and pathogenicity. It is
a neglected, economic and socio-cultural problem in Pakistan. The available data about the
incidence of CE is very limited and no extensive study has been reported in Pakistan. The
current study was aimed to analyze the hospital reported cases of CE and the associated risk
factors related to the incidence of CE. The hospital-based data of CE for the time period of
January 2012-December 2017 was collected from Islamabad, Rawalpindi and Peshawar. The
data covered demographic characteristics including age, gender, and cyst localization of
infected individuals and socioeconomic determinants. The data was analyzed based upon
different risk factors along with the different socioeconomic parameters that has an important
impact on the distribution of disease. A total of 228 cases were presented in the selected
hospitals of different cities during the study period. Out of total 228 patients, 59.21% were
males and 40.78% were females (P<0.001). Most infections have been recorded in young
adults (>20-30) showing 22.8% of total infected individuals followed by children (0-10) showing
10.5% (n=24), respectively (P<0.001). Liver was the most vulnerable organ (58.77%, n=134)
followed by lungs (14.47%, n=33) (P<0.001). The infection was higher among rural communities
(84.2%) than urban (12.8%) (P<0.001). Socioeconomic and demographic factors had an
important impact on the intensity of disease (P<0.001). The occurrence of cases in children
and young adults was an important finding as it indicated an active transmission of the
parasite in Pakistan along with the poverty index. Emergence of echinococcosis in Pakistan
showed that emerging health issues in Pakistan could bring the disease to limelight for future
research. This finding, together with the fact that 1 hospital reported 214 cases over 6 years
325
underlines the need for a program for prevention/control of this disease in Pakistan. The
timely measure needs to be taken to hamper the disease development and establishment. In
order to control the disease, complete surveillance should be done which in turn weighs down
the disease progress.