1.Comparison of susceptibility test methods to detect penicillin susceptibility in Streptococcus pneumoniae isolates.
Mohd Desa Mohd Nasir ; Navaratnam Parasakthi
The Malaysian journal of pathology 2004;26(1):29-33
The increasing prevalence of penicillin-resistant Streptococuus pneumoniae urges for fast and accurate susceptibility testing methods. This study evaluated the comparability of three commonly used techniques; disk diffusion, E-test and agar dilution, to detect penicillin susceptibility in clinical isolates of S. pneumoniae. Fifty pneumococcal isolates, obtained from patients at the University of Malaya Medical Centre, were selected to include both penicillin-susceptible strains and those that had decreased susceptibility (resistant and intermediate) to penicillin. The minimum inhibitory concentration (MIC) values of penicillin to serve as the reference was determined by the agar dilution method in which, based on the MIC breakpoints recommended by the National Committee for Clinical Laboratory Standards (NCCLS), 27 strains had decreased susceptibility to penicillin with 17 strains resistant and 10 intermediate. Comparing to the agar dilution method, oxacillin disk diffusion test detected all strains with decreased penicillin susceptibility as such while E-test showed a close agreement of susceptibility (92%) of the isolates to penicillin. This confirmed that oxacillin is a good screening test for S. pneumoniae isolates with decreased susceptibility to penicillin while E-test is very reliable for rapid and accurate detection of penicillin susceptibility.
Penicillin
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Streptococcus pneumoniae
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Dilution
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Upper case ee
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Clinical
2.Prevalence of Escherichia Coli O157:H7 and Enterobacteriaceae on Hands of Workers in Halal Cattle Abattoirs in Peninsular Malaysia
Shamsul Bahri Mohd Tamrin ; Adamu Muhammad Tukur ; Mohd Desa Mohd Nasir ; Khairani-Bejo Siti
Malaysian Journal of Medical Sciences 2016;23(5):65-71
Background: Several occupational diseases of multiple origins are encountered among
abattoir workers. Presence of indicator microorganisms (coliforms) on hands of workers can be
used a gauge for hygienic practices.
Methods: A cross-sectional study was performed to assess the prevalence of E.coli
and enterobacteriaceae among Halal abattoir workers in some government halal abattoirs of
Malaysia. A total of one hundred and sixty-five hand swab samples were collected from workers
of Halal abattoirs in Malaysia. The samples were subjected to microbiological analysis for
characterisation and serotyping.
Results: The results have shown that no Escherichia coli O157:H7 was isolated on
the hands of abattoir workers before and after work. However, a total prevalence of 9.7% was
recorded for all samples during work. For non-O157:H7, total prevalence of 33.3% during work
and 13% after work were obtained. High prevalence was recorded in sample taken during work
from Tampin, Jasin and Kemaman (100% each) while low prevalence where observed in Shah
Alam, Banting and Ipoh (20% each).
Conclusions: Based on the findings the hygienic practices of hand washing among the
workers in few locations was found to be low especially after work.
3.Relationship between Demographic and Clinical Factors with Physical Functioning of Stroke Patients
Shazli Ezzat Ghazali ; Mohd Faizal Mohd Zulkifly ; Normah Che Din ; Asmawati Desa ; Aymond Azman Ali
Malaysian Journal of Health Sciences 2016;14(2):23-30
Stroke is a causal factor that commonly caused physical impairments and activity limitations among patients to perform
daily activities until at certain level stroke patients will experience disability. The aim of this study is to examine the
relationship of each demographic and clinical factors that is believed to associate with physical functioning of patients
those who experienced stroke. This present study also try to compare physical functioning of patients with associated
factors and then examine the correlation between those factors with physical functioning. A total of 147 respondents that
pass for cognitive screening test involved in this study. Barthel Index (ADL) was administered to the respondents after 6
weeks of stroke attack in order to measure their physical functioning status. Results found that there was a significant
difference [F(3, 143) = 4.06; p < 0.01] between level of educations with physical functioning of patients. With respect
to clinical factors also showed a significant difference (p < 0.01) was higher in physical functioning when stroke attack
occurred at right hemisphere of brain. There was a significant difference (p < 0.01) in physical functioning with respect
to belief of recovery. Furthermore, number of stroke attack also showed a significant difference [F(1, 145) = 11.19; [p
< 0.01] in physical functioning of patients. Correlation test that was carried out found a positive significant correlation
(r = 0.24; p < 0.01) between physical functioning with respect to the affected lesion side. In conclusion, demographic
and clinical factors also played the roles to determine level of physical functioning among stroke patients and thus these
factors should be considered in any studies that intended to enhance physical functioning of patients in future.
Stroke
4.Pneumococcal replicative state in relation to its adherence capacity to A549-cell line: A preliminary in vitro analysis
Mohd Nasir Mohd Desa ; Navaratnam Parasakthi ; Shamala Devi Sekaran ; Jamunarani Vadivelu
Malaysian Journal of Microbiology 2011;7(2):107-110
This study was to compare the replication capacity of pneumococcal isolates (serotypes 1, 7F, 19F and 23F) with their adherence pattern to monolayer cells (A549). For standardization purposes, all isolates showed a normal growth curve in both bacteriological (THB + 0.5% yeast extract with and without 2% FBS) and cell culture media (RPMI + 2% FBS). In the former media, a shorter lag phase was observed for isolate serotypes 1 and 7F in presence of serum while in the later; growth yield was lower for all isolates with stationary phase approaching OD600 of 0.01 as compared to 1.0 in bacteriological media. In the replicative analysis at different growth phases of the isolates in cell culture media, growth capacity at 3 h post-incubation was frequently twice as that at 1 h, and that at early-log phase was frequently higher than that at mid-log phase at both post-incubation times. Adherence was frequently the least at early-log phase although the isolates were in the most active state of replication to increase the number of pneumococcal cells to adhere. At mid- and late-log phases, pneumococcal adherence was frequently higher although the replication was reduced. This study marks the potential correlation between pneumococcal growth fitness and adherence capacity whereby the later may not be superior during the early growth phase.
5.The Ability of Recovery Locus of Control Scale (RLOC) and Post-traumatic Stress Symptoms (PTSS) to Predict the Physical Functioning of Stroke Patients
Mohd Faizal Mohd Zulkifly ; Shazli Ezzat Ghazali ; Normah Che Din ; Asmawati Desa ; Azman Ali Raymond
Malaysian Journal of Medical Sciences 2015;22(5):31-41
Background: The aim of this study was to address the ability of the recovery locus of control
scale (RLOC) and post-traumatic stress symptoms (PTSS) to predict physical functioning among
stroke patients. In addition, the best predictors within the subdomains of the RLOC and PTSS were
also investigated.
Methods: A total of 147 stroke patients aged 33–85 years who had intact cognitive functioning
were involved in the study. The Recovery Locus of Control Scale (RLOC), the Impact of Event Scale-
Revised (IES-R), and the Barthel Index (ADL) were administered to respondents six weeks after
stroke.
Results: The results showed that the RLOC and PTSS were significant predictors and
were capable of predicting 31% of the physical functioning of stroke patients (adjusted R2 = 0.31;
P < 0.001). Furthermore, with respect to clinical factors, the affected lesion side contributed to
predicting 7% of the physical functioning (R2 = 0.07; P < 0.001). A hierarchical regression analysis
found that the internal recovery locus of control (IRLOC) was a predictor capable of explaining 18%
of the predicted physical functioning (adjusted R2 = 0.18; P < 0.001). Meanwhile, avoidance was the
most influential significant predictor among PTSS, contributing to 24% of the predicting physical
functioning (adjusted R2 = 0.24; P < 0.001).
Conclusion: In conclusion, the RLOC and PTSS were capable of predicting physical
functioning among stroke patients.
6.Presence of methicillin resistance and heteroresistance among Coagulase Negative Staphylococci (CoNS) isolates obtained from Health Sciences students at a Public University
Pung, H.P. ; Mat Azis, N. ; Abdul Rachman, A.R. ; Zakaria, Z.A. ; Mohd Desa, M.N.
Tropical Biomedicine 2017;34(1):84-88
This study was carried out to investigate the Coagulase Negative Staphylococci
(CoNS) nasal carriage and the presence of methicillin resistant Coagulase Negative
Staphylococci (MR-CoNS) among health sciences students at Faculty of Medicine and Health
Sciences, Universiti Putra Malaysia. A total of 120 isolates of CoNS (62.5%) was isolated from
192 student volunteers. The mecA gene was detected in 15 isolates of CoNS (12.5%). Eight
out of the 15 isolates of mecA positive CoNS were resistant to cefoxitin in disc diffusion test
whereas the remaining seven isolates of mecA positive CoNS were susceptible to cefoxitin.
Analysis of questionnaires showed no significant association between CoNS nasal carriage
and the socio-demographic and risk factors except for the genders and history of cold
(P < 0.050). Generally, this finding showed a relatively low level of methicillin resistance
among CoNS nasal carriage from student volunteers.
7.Multilocus Sequence Typing Analysis of Invasive and Non-Invasive Group B Streptococcus of Hospital Origin in Malaysia
Menagah Ezhumalai ; AbdulRahman Muthanna ; Zarizal Suhail ; Nurul Diana Dzaraly ; Syafinaz Amin-Nordin ; Mohammad Noor Azmai Amal ; Mohd Nasir Mohd Desa
Malaysian Journal of Medical Sciences 2020;27(1):134-138
The aim of this study was to study the genotype of a hospital collection of Group B
Streptococcus (GBS) from invasive and non-invasive sites. Fifty-one pre-characterised human
of GBS were re-identified and further analysed by multilocus sequence typing (MLST) in relation
to previously published serotypes. Fifteen sequence types (ST) were found with ST1 being the
most predominant. ST1 was also associated with majority of the invasive isolates. The genotypic
distribution patterns of GBS in this study were largely in agreement with previous reports from
other countries indicating the tendency of certain genotypes to prevail in human infection settings.
8.The emergence of Acinetobacter baumannii ST-6 multidrug resistant: A resilient biofilm producer, Malaysia
Jayakayatri Jeevajothi Nathan ; Mohd Nasir Mohd Desa ; Voon Chen Yong ; Parasakthi Navaratnam ; Navindra Kumari Palanisamy ; Eng Hwa Wong
Malaysian Journal of Microbiology 2016;12(4):265-269
Aims: The aim of this research is to explore the presence of multidrug-resistance (MDR) Acinetobacter baumannii
strains isolated from hospitalized patients in a tertiary-care center, Subang Jaya, Selangor, Malaysia and to compare
their genotypic and phenotypic characteristics.
Methodology and results: Clonal relationships were determined by multilocus sequence typing (MLST) and biofilm
forming ability was evaluated by using 2, 3 - bis (2 - methoxy - 4 - nitro - 5-sulfophenyl) - 5 - [(phenylamino) carbonyl] -
2H-tetrazolium hydroxide (XTT) reduction assay in microplates and Congo red agar method (CRA). Four virulence
genes coding for A. baumannii pilus usher-chaperone assembly protein, csuE gene; outer membrane protein, ompA
gene; biofilm poly-β-1, 6-Nacetylglucosamine (PNAG) synthesis protein, pgaA gene; and acinetobactin-mediated iron
acquisition protein, bauA gene were searched for in a collection of strains. Antimicrobial resistance against 11 antibiotics
were studied by broth microdilution method. Seventeen A. baumannii clinical strains were isolated and MLST showed
that the strains belonged to 5 distinct sequence types (STs), namely, ST-6, ST-265, ST-324, ST-325 and ST-432. Fiftythree
percent of the strains were resistant to 4 or more antibiotics. Twelve strains produced biofilm and out of them, 4
were strong biofilm producer, besides, these strong biofilm producers were MDR strains and belongs to ST-6. In
addition, all strains were ompA positive, biofilm producing strains were csuE and pgaA positive and only strong biofilm
producing strains were bauA positive.
Conclusion, significance and impact study: Our study demonstrates that the ST-6 strains in Malaysia could represent
MDR, capable of forming strong biofilm and possess csuE, ompA, pgaA and bauA genes, virulence characteristics that
probably help the bacteria to persist and cause infection.
Acinetobacter baumannii
9.Staphylococcus aureus Nasal Carriers Among Medical Students in A Medical School
Syafinaz Amin Nordin ; Nur Ain Nabila Za'im ; Nurul Nadzirah Sahari ; Siti Fatimah Jamaluddin ; Shahram Ahmadi ; Mohd Nasir Mohd Desa
The Medical Journal of Malaysia 2012;67(6):636-638
Staphylococcus aureus is usually considered a colonizer
but can result in infections under favourable conditions,
especially in the healthcare setting. Healthcare workers can be colonized by S. aureus, and may transmit them to
patients under their care. We conducted a cross sectional
study to determine the prevalence of S. aureus nasal
carriers among medical students in Universiti Putra
Malaysia (UPM) (from January to June 2011). Our study
involved 209 medical students comprising of 111 and 97 preclinical and clinical students respectively. A selfadministered questionnaire was distributed and nasal
swabs were collected. Upon identification, the antibiotic
susceptibility of the isolates was examined followed by
categorical analysis (Chi-square and Fisher’s exact tests)
with factors associated with S. aureus nasal carriage.
Twenty one (10%) S. aureus strains were isolated from 209
nasal swab samples. 14 isolates were from pre-clinical
students while the remaining seven were from clinical
students. There was no significant association between
gender, ethnicity, health status, skin infection and students’ exposure to hospital environment with S. aureus nasal carriage (p>0.05). Nineteen (90.5%) isolates were resistant to penicillin and there was also no significant association between penicillin resistant and the students’ groups. One (5.3%) isolate was resistant to erythromycin. There was no methicillin-resistant S. aureus isolated in this study.
10.Prevalence of macrolide resistance and in vitro activities of six antimicrobial agents against clinical isolates of Streptococcus pneumoniae from a multi-center surveillance in Malaysia
Jayakayatri Jeevajothi Nathan ; Niazlin Mohd Taib ; Mohd Nasir Mohd Desa ; Siti Norbaya Masri ; Rohani Md Yasin ; Farida Jamal ; Sreenivasa Rao Sagineedu ; Arunkumar Karunanidhi
The Medical Journal of Malaysia 2013;68(2):119-124
The in vitro activities of 6 antimicrobial agents against
clinical isolates of Streptococcus pneumoniae
(pneumococci) were investigated and the erythromycin
minimum inhibitory concentrations (MICs) were correlated
with the two major macrolide resistance determinants,
mef(A) and erm(B). MICs of commonly used antibiotics as
well as the presence of macrolide resistance determinant
genes in all isolates were tested. Seventy one
pneumococcal isolates collected at Institute for Medical
Research (IMR) were included in this study. Phenotypic
characterization, MIC determination using E-test strips and
polymerase chain reactions for antibiotic resistance
determination were included. Among the isolates, 25 (35.2%)
isolates were erythromycin susceptible, 3 (4.2%) were
intermediate and 42 (60.6%) were resistant. Fifty three
isolates (74.7%) were found with mef(A) alone, 15 (21.1%)
isolates with erm(B) + mef(A) combination and 3 (4.2%)
isolates with none of the two genes. The in vitro activity of penicillin, amoxicillin clavulanic acid, ceftriaxone and
cefotaxime is superior to trimethoprim-sulfamethoxazole
and erythromycin. In conclusion, pneumococcal isolates in
this study were highly susceptible to penicillin with very low MICs. However, a very high prevalence rate of erythromycin resistance was observed. Erythromycin resistant S.pneumoniae isolates with both mef(A) and erm(B) showed very high MICs ≥256 μg/mL.