1.Discovery of Outpatient Care Process of a Tertiary University Hospital Using Process Mining.
Eunhye KIM ; Seok KIM ; Minseok SONG ; Seongjoo KIM ; Donghyun YOO ; Hee HWANG ; Sooyoung YOO
Healthcare Informatics Research 2013;19(1):42-49
OBJECTIVES: There is a need for effective processes in healthcare clinics, especially in tertiary hospitals, that consist of a set of complex steps for outpatient care, in order to provide high quality care and reduce the time cost. This study aimed to discover the potential of a process mining technique to determine an outpatient care process that can be utilized for further improvements. METHODS: The outpatient event log was defined, and the log data for a month was extracted from the hospital information system of a tertiary university hospital. That data was used in process mining to discover an outpatient care process model, and then the machine-driven model was compared with a domain expert-driven process model in terms of the accuracy of the matching rate. RESULTS: From a total of 698,158 event logs, the most frequent pattern was found to be "Consultation registration > Consultation > Consultation scheduling > Payment > Outside-hospital prescription printing" (11.05% from a total cases). The matching rate between the expert-driven process model and the machine-driven model was found to be approximately 89.01%, and most of the processes occurred with relative accuracy in accordance with the expert-driven process model. CONCLUSIONS: Knowledge regarding the process that occurs most frequently in the pattern is expected to be useful for hospital resource assignments. Through this research, we confirmed that process mining techniques can be applied in the healthcare area, and through detailed and customized analysis in the future, it can be expected to be used to improve actual outpatient care processes.
Ambulatory Care
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Delivery of Health Care
;
Hospital Information Systems
;
Humans
;
Mining
;
Outpatients
;
Prescriptions
;
Tertiary Care Centers
2.Dexamethasone differentiates NG108-15 cells through cyclooxygenase1 induction.
Hyeon Soo KIM ; Minseok SONG ; Euikyung KIM ; Sung Ho RYU ; Pann Ghill SUH
Experimental & Molecular Medicine 2003;35(3):203-210
Cyclooxygenase (COX) is a key enzyme in the conversion of arachidonic acid into prostanoids which participate in various cellular functions including apoptosis, mitogenesis, inflammation, immune modulation and differentiation. Moreover, the synthetic glucocorticoid, dexamethasone has immune modulating and anti-inflammatory effects in vivo. Recently, dexamethasone was found to enhance retinoic acid-induced neuronal differentiation. In this study, we investigated the mechanisms of dexamethasone-mediated neuronal differentiation. Immunoblotting and morphological analysis demonstrated that dexamethasone induced neuronal differentiation through COX 1 induction. This phenomenon was inhibited by indomethacin, a COX inhibitor. In addition, the addition of exogenous prostaglandin E2 (PGE2), a substance produced by the COX-mediated pathway, triggered neurite outgrowth of cells treated with COX inhibitor. Taken together, COX 1 appears to play an important role in dexamethasone-mediated neuronal differentiation.
Animals
;
Anti-Inflammatory Agents/pharmacology
;
Cell Differentiation/*drug effects
;
Cyclooxygenase Inhibitors/pharmacology
;
Dexamethasone/*pharmacology
;
Dinoprostone/metabolism
;
Enzyme Induction
;
Hybrid Cells
;
Indomethacin/pharmacology
;
Isoenzymes/*biosynthesis
;
Mice
;
Prostaglandin-Endoperoxide Synthase/*biosynthesis
;
Rats
;
Tumor Cells, Cultured
3.Conformance Analysis of Clinical Pathway Using Electronic Health Record Data.
Sooyoung YOO ; Minsu CHO ; Seok KIM ; Eunhye KIM ; So Min PARK ; Kidong KIM ; Hee HWANG ; Minseok SONG
Healthcare Informatics Research 2015;21(3):161-166
OBJECTIVES: The objective of this study was to confirm the conformance rate of the actual usage of the clinical pathway (CP) using Electronic Health Record (EHR) log data in a tertiary general university hospital to improve the CP by reflecting real-world care processes. METHODS: We analyzed the application and matching rates of clinicians' orders with predefined CP order sets based on data from 164 inpatients who received appendectomies out of all patients who were hospitalized from August 2013 to June 2014. We collected EHR log data on patient information, medication orders, operation performed, diagnosis, transfer, and CP order sets. The data were statistically analyzed. RESULTS: The average value of the actual application rate of the prescribed CP order ranged from 0.75 to 0.89. The application rate decreased when the order date was factored in along with the order code and type. Among CP pre-operation, intra-operation, post-operation, routine, and discharge orders, orders pertaining to operations had higher application rates than other types of orders. Routine orders and discharge orders had lower application rates. CONCLUSIONS: This analysis of the application and matching rates of CP orders suggests that it is possible to improve these rates by updating the existing CP order sets for routine discharge orders to reflect data-driven evidence. This study shows that it is possible to improve the application and matching rates of the CP using EHR log data. However, further research should be performed to analyze the effects of these rates on care outcomes.
Appendectomy
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Critical Pathways*
;
Diagnosis
;
Electronic Health Records*
;
Humans
;
Inpatients
4.First Case of Continuous Ambulatory Peritoneal Dialysis-Related Peritonitis Caused by Cryptococcus arboriformis.
Hyungjun IM ; Jeong Don CHAE ; Minseok YOO ; So Young LEE ; Eun Ju SONG ; Su Ah SUNG ; Young Hwan HWANG ; Jeong Hwan SHIN ; Young Uk CHO
Annals of Laboratory Medicine 2014;34(4):328-331
No abstract available.
Amphotericin B/therapeutic use
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Antifungal Agents/pharmacology/therapeutic use
;
Cryptococcosis/*diagnosis/drug therapy/microbiology
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Cryptococcus/classification/drug effects/*isolation & purification
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DNA, Ribosomal/chemistry/metabolism
;
Fluconazole/therapeutic use
;
Humans
;
Male
;
Microbial Sensitivity Tests
;
Middle Aged
;
Peritoneal Dialysis, Continuous Ambulatory
;
Peritonitis/*diagnosis/etiology
;
Phylogeny
;
Saccharomyces cerevisiae/drug effects/isolation & purification
;
Sequence Homology, Nucleic Acid
5.Inositol 5'-phosphatase, SHIP1 interacts with phospholipase C-gamma1 and modulates EGF-induced PLC activity.
Minseok SONG ; Myung Jong KIM ; Sanghoon HA ; Jong Bae PARK ; Sung Ho RYU ; Pann Ghill SUH
Experimental & Molecular Medicine 2005;37(3):161-168
Phospholipase C-gamma1, containing two SH2 and one SH3 domains which participate in the interaction between signaling molecules, plays a significant role in the growth factor-induced signal transduction. However, the role of the SH domains in the growth factor-induced PLC-gamma1 regulation is unclear. By peptide-mass fingerprinting analysis, we have identified SHIP1 as the binding protein for the SH3 domain of PLC-gamma1. SHIP1 was co-immunoprecipitated with PLC-gamma1 and potentiated EGF-induced PLC-gamma1 activation. However, inositol 5'-phosphatase activity of SHIP1 was not required for the potentiation of EGF-induced PLC-gamma1 activation. Taken together, these results suggest that SHIP1 may function as an adaptor protein which can potentiate EGF-induced PLC-gamma1 activation without regards to its inositol 5'-phosphatase activity.
Adaptor Proteins, Signal Transducing
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Amino Acid Sequence
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Animals
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COS Cells/enzymology
;
Cercopithecus aethiops
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Enzyme Activation
;
Epidermal Growth Factor/*pharmacology
;
Immunoprecipitation
;
Inositol 1,4,5-Trisphosphate/metabolism
;
Molecular Sequence Data
;
Phospholipase C/chemistry/*metabolism
;
Phosphoric Monoester Hydrolases/chemistry/*metabolism
;
Protein Binding
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Signal Transduction
;
src Homology Domains/*physiology
6.Trends in Research on Patients With COVID-19 in Korean Medical Journals
Heejeong CHOI ; Seunggwan SONG ; Heesang AHN ; Hyobean YANG ; Hyeonseong LIM ; Yohan PARK ; Juhyun KIM ; Hongju YONG ; Minseok YOON ; Mi Ah HAN
Journal of Preventive Medicine and Public Health 2024;57(1):47-54
Objectives:
This study was conducted to systematically summarize trends in research concerning patients with coronavirus disease 2019 (COVID-19) as reported in Korean medical journals.
Methods:
We performed a literature search of KoreaMed from January 2020 to September 2022. We included only primary studies of patients with COVID-19. Two reviewers screened titles and abstracts, then performed full-text screening, both independently and in duplicate. We first identified the 5 journals with the greatest numbers of eligible publications, then extracted data pertaining to the general characteristics, study population attributes, and research features of papers published in these journals.
Results:
Our analysis encompassed 142 primary studies. Of these, approximately 41.0% reported a funding source, while 3.5% disclosed a conflict of interest. In 2020, 42.9% of studies included fewer than 10 participants; however, by 2022, the proportion of studies with over 200 participants had increased to 40.6%. The most common design was the cohort study (48.6%), followed by case reports/series (35.2%). Only 3 randomized controlled trials were identified. Studies most frequently focused on prognosis (58.5%), followed by therapy/intervention (20.4%). Regarding the type of intervention/exposure, therapeutic clinical interventions comprised 26.1%, while studies of morbidity accounted for 13.4%. As for the outcomes measured, 50.7% of studies assessed symptoms/clinical status/improvement, and 14.1% evaluated mortality.
Conclusions
Employing a systematic approach, we examined the characteristics of research involving patients with COVID-19 that was published in Korean medical journals from 2020 onward. Subsequent research should assess not only publication trends over a longer timeframe but also the quality of evidence provided.
7.Dynamic relocalization of NHERF1 mediates chemotactic migration of ovarian cancer cells toward lysophosphatidic acid stimulation.
Yong Seok OH ; Kyun HEO ; Eung Kyun KIM ; Jin Hyeok JANG ; Sun Sik BAE ; Jong Bae PARK ; Yun Hee KIM ; Minseok SONG ; Sang Ryong KIM ; Sung Ho RYU ; In Hoo KIM ; Pann Ghill SUH
Experimental & Molecular Medicine 2017;49(7):e351-
NHERF1/EBP50 (Na⁺/H⁺ exchanger regulating factor 1; Ezrin-binding phosphoprotein of 50 kDa) organizes stable protein complexes beneath the apical membrane of polar epithelial cells. By contrast, in cancer cells without any fixed polarity, NHERF1 often localizes in the cytoplasm. The regulation of cytoplasmic NHERF1 and its role in cancer progression remain unclear. In this study, we found that, upon lysophosphatidic acid (LPA) stimulation, cytoplasmic NHERF1 rapidly translocated to the plasma membrane, and subsequently to cortical protrusion structures, of ovarian cancer cells. This movement depended on direct binding of NHERF1 to C-terminally phosphorylated ERM proteins (cpERMs). Moreover, NHERF1 depletion downregulated cpERMs and further impaired cpERM-dependent remodeling of the cell cortex, suggesting reciprocal regulation between these proteins. The LPA-induced protein complex was highly enriched in migratory pseudopodia, whose formation was impaired by overexpression of NHERF1 truncation mutants. Consistent with this, NHERF1 depletion in various types of cancer cells abolished chemotactic cell migration toward a LPA gradient. Taken together, our findings suggest that the high dynamics of cytosolic NHERF1 provide cancer cells with a means of controlling chemotactic migration. This capacity is likely to be essential for ovarian cancer progression in tumor microenvironments containing LPA.
Cell Membrane
;
Cell Movement
;
Cytoplasm
;
Cytosol
;
Epithelial Cells
;
Membranes
;
Ovarian Neoplasms*
;
Pseudopodia
;
Tumor Microenvironment
8.Clinical Characteristics of Campylobacter Enterocolitis in Korean Adults: A Retrospective Study at a Single Center
Minseok YOO ; Sook Hee CHUNG ; Young Sook PARK ; Il Hwan OH ; Won Young CHAE ; Soo Hyung KIM ; Ki Young LEE ; Chi Woo SONG ; Byoung Kwan SON ; Seong Hwan KIM ; Young Kwan JO ; Kwang Hyun JUNG ; Hyo Young LEE ; Jeong Don CHAE
The Korean Journal of Gastroenterology 2020;75(4):188-197
Background/Aims:
Although the diarrheal disease caused by Campylobacter bacteria has been continuously increasing in Korea, there has been limited study on the clinical aspects of Campylobacter enteritis in adults in Korea. The purpose of this study was to analyze the clinical features and characteristics of adult patients with Campylobacter enteritis.
Methods:
This retrospective study included patients diagnosed with Campylobacter enterocolitis at Nowon Eulji University Hopsital between January 2016 and December 2017. Campylobacter enterocolitis was diagnosed through polymerase chain reaction of stools from patients with acute diarrhea.
Results:
Among 630 hospitalized patients with acute diarrhea, Campylobacter enterocolitis was diagnosed in 88 patients (14.0%). The mean age was 37.9±19.1 years. Campylobacter enterocolitis was most prevalent in the summer (52 patients, 59.1%). Patients exhibited more than 10 times of diarrhea in 36 (40.9%), high fever above 39℃ in 19 (21.59%), and abdominal pain above 5 points on the numeric rating scale in 23 (26.14%) cases. In abdominal CT scan, pancolitis was found in 58 patients (65.9%). Small intestine was involved in 37 patients (42.4%). Mean CRP was 10.14 mg/dL (range 0.72-32.27 mg/dL). The duration of diarrhea after antibiotics treatment was 2.34±1.51 days in the ciprofloxacin treatment group and 2.26±1.71 days in the 3rd cephalosporin treatment group.
Conclusions
Campylobacter enterocolitis was common during summer. Commonly healthy young adults were hospitalized due to severe symptoms of Campylobacter enterocolitis. Whole colon and small bowel were frequently involved. Most patients were treated with antibiotics, and the efficacy of 3rd cephalosporin treatment was not inferior to that of ciprofloxacin treatment.
9.Exploratory evaluation of the role of cardiac troponin on the clinical outcome of patients visiting emergency department with or without chronic kidney disease
Minseok SONG ; Eun-Jin KANG ; Taerim KIM ; Jong Eun PARK ; Gun Tak LEE ; Hee YOON ; Sung Yeon HWANG ; Won Chul CHA ; Tae Gun SHIN ; Min Seob SIM ; Ik Joon JO ; Jin-Ho CHOI
Journal of the Korean Society of Emergency Medicine 2021;32(6):548-560
Objective:
Elevated levels of cardiac troponin in chronic kidney disease (CKD) patients admitted to the emergency department (ED) is not well understood and is often ignored. This study aimed to investigate the impact of cardiac troponin I (TnI) levels on the clinical outcome of patients visiting the ED with or without CKD.
Methods:
In this retrospective single-center cohort study, we enrolled patients visiting the ED without a diagnosis of coronary artery disease (CAD). Elevated cardiac TnI was defined as being ≥99th percentile of the normal population (Siemens ADVIA Centaur TnI-Ultra≥0.040 ng/mL). The clinical outcomes of patients with CKD stage≤2 and CKD stage ≥3 were compared. The primary endpoint was the 180-day all-cause death, including cardiovascular and non-cardiovascular deaths.
Results:
Among a total of 30,472 patients (median age, 61 years; male sex, 54.3%), elevated TnI was found in 4,377 patients (14.4%). There were 3,634 deaths (11.9%) including 584 cardiovascular (1.9%) and 3,050 non-cardiovascular deaths (10.0%). The risk of all-cause death increased in patients with elevated TnI in both CKD stage≤2 (hazard ratio [HR], 2.1; 95% confidence interval [CI], 1.9-2.3) and CKD stage≥3 (HR, 1.5; 95% CI, 1.4-1.7), and so did the risks of cardiovascular and non-cardiovascular death (HR, 1.2-4.7) (P<0.05, all). The association of elevated TnI with death risk was consistent in multivariate analyses and in most clinical subgroup analyses.
Conclusion
Elevated TnI was associated with higher 180-day mortality irrespective of renal function among patients visiting the ED without documented CAD. CKD patients visiting the ED with elevated TnI may warrant additional evaluation or careful follow-up even without the presence of CAD.