1.Study on mechanism of Cuscutae Semen flavonoids in improving reproductive damage of Tripterygium Glycosides Tablets in rats based on high-throughput transcriptome sequencing.
Bo ZHANG ; Hang SU ; Xian-Qing REN ; Wei-Xia LI ; Ying DING ; Xia ZHANG ; Wen-Sheng ZHAI ; Chun-Dong SONG
China Journal of Chinese Materia Medica 2019;44(16):3478-3485
Tripterygium Glycosides Tablets has good anti-inflammatory and immunomodulatory activities,but its reproductive damage is significant. Previous studies of the research group have found that Cuscutae Semen flavonoids can improve spermatogenic cell damage caused by Tripterygium Glycosides Tablets by regulating spermatogenic cell cycle,apoptosis and related protein expression,but the mechanism of action at the gene level is still unclear. In this study,Illumina high-throughput sequencing platform was applied in transcriptional sequencing of spermatogenic cells of rats after the intervention of Cuscutae Semen flavonoids and Tripterygium Glycosides Tablets. Differentially expressed genes were screened out and the GO enrichment and KEGG pathway analysis of differentially expressed genes were conducted to explore the mechanism of Cuscutae Semen flavonoids in improving reproductive injury caused by Tripterygium Glycosides Tablets. The results showed that 794 up-regulated genes and 491 down-regulated genes were screened in Tripterygium Glycosides Tablets group compared with the blank group. Compared with Tripterygium Glycosides Tablets,440 up-regulated genes and 784 down-regulated genes were screened in the Cuscutae Semen flavonoids+Tripterygium Glycosides Tablets group. Among them,the gene closely related to reproductive function is DNMT3 L. Analysis of GO function and KEGG signaling pathway enrichment showed that the above differentially expressed genes were mainly enriched in cell,cell process,catalytic activity,binding,ovarian steroid synthesis,thyroid hormone and other functions and pathways. The thyroid hormone signaling pathway was the common enrichment pathway of the two control groups. In a word,Cuscutae Semen flavonoids has a good treatment effect on male reproductive damage caused by Tripterygium Glycosides Tablets. The mechanism may be closely related to up-regulation of DNMT3 L genes and intervention of thyroid hormone signaling pathway. At the same time,the discovery of many different genes provides valuable information for study on the mechanism of Cuscutae Semen flavonoids and Tripterygium Glycosides Tablets compatibility decreasing toxicity and increasing efficiency.
Animals
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Cuscuta
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chemistry
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DNA (Cytosine-5-)-Methyltransferases
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genetics
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Female
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Flavonoids
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pharmacology
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Genitalia
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drug effects
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pathology
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Glycosides
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toxicity
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High-Throughput Nucleotide Sequencing
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Male
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Rats
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Seeds
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chemistry
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Signal Transduction
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Tablets
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Thyroid Hormones
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genetics
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Transcriptome
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Tripterygium
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toxicity
2.Improved the solubility of maize uroporphyrinogen III methyltransferase as the red fluorescent indicator by site-directed mutagenesis.
Hai-Yun PAN ; Ying CHENG ; Su-Wen ZHU ; Jun FAN
Chinese Journal of Biotechnology 2007;23(2):206-210
S-adenosylmethionine-dependent uroporphyrinogen III methyltransferase (SUMT) is a novel red fluorescence indicator. However, the production of SUMT in Escherichia coli is restricted by its relatively low solubility, and little is known about the red fluorescent materials that are associate with SUMT. Two individual SUMT mutations, L166A and L88R/L89G double mutant were produced by site-directed mutagenesis. Both mutants were overexpressed in E. coli and purified by Ni-NTA chromatography. The reddish mixtures isolated from the purified L88R/L89G double mutant were analyzed by UV-visible spectra scanning and mass analysis(MS). The L88R/L89G double mutant has enzymatic activity in vivo, whereas L166A mutant loses the activity. Trimethylpyrrocorphin is identified as the main constituent in the isolated pigments. The purified L88R/L89G mutant increases protein solubility, which is applied potentially as the fluorescent indicator denoting the solubility of protein fusion partner.
Amino Acid Substitution
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Electrophoresis, Polyacrylamide Gel
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Escherichia coli
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genetics
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Fluorescence
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Mass Spectrometry
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Methyltransferases
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chemistry
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genetics
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metabolism
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Molecular Weight
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Mutagenesis, Site-Directed
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methods
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Mutation
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Pigments, Biological
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chemistry
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metabolism
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Plant Proteins
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chemistry
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genetics
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metabolism
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Recombinant Proteins
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chemistry
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metabolism
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Solubility
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Spectrophotometry, Ultraviolet
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Zea mays
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enzymology
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genetics
3.Antimicrobial Resistance Determinants in Imipenem-nonsusceptible Acinetobacter calcoaceticus-baumannii Complex Isolated in Daejeon, Korea.
Ji Youn SUNG ; Kye Chul KWON ; Hye Hyun CHO ; Sun Hoe KOO
The Korean Journal of Laboratory Medicine 2011;31(4):265-270
BACKGROUND: Members of the Acinetobacter calcoaceticus-baumannii (Acb) complex are important opportunistic bacterial pathogens and present significant therapeutic challenges in the treatment of nosocomial infections. In the present study, we investigated the integrons and various genes involved in resistance to carbapenems, aminoglycosides, and fluoroquinolones in 56 imipenem-nonsusceptible Acb complex isolates. METHODS: This study included 44 imipenem-nonsusceptible A. baumannii, 10 Acinetobacter genomic species 3, and 2 Acinetobacter genomic species 13TU strains isolated in Daejeon, Korea. The minimum inhibitory concentrations (MICs) were determined by Etest. PCR and DNA sequencing were used to identify the genes that potentially contribute to each resistance phenotype. RESULTS: All A. baumannii isolates harbored the blaOXA-51-like gene, and 21 isolates (47.7%) co-produced OXA-23. However, isolates of Acinetobacter genomic species 3 and 13TU only contained blaIMP-1 or blaVIM-2. Most Acb complex isolates (94.6%) harbored class 1 integrons, armA, and/or aminoglycoside-modifying enzymes (AMEs). Of particular note was the fact that armA and aph(3')-Ia were only detected in A. baumannii isolates, which were highly resistant to amikacin (MIC50> or =256) and gentamicin (MIC50> or =1,024). In all 44 A. baumannii isolates, resistance to fluoroquinolones was conferred by sense mutations in the gyrA and parC. However, sense mutations in parC were not found in Acinetobacter genomic species 3 or 13TU isolates. CONCLUSIONS: Several differences in carbapenem, aminoglycoside, and fluoroquinolone resistance gene content were detected among Acb complex isolates. However, most Acb complex isolates (87.5%) possessed integrons, carbapenemases, AMEs, and mutations in gyrA. The co-occurrence of several resistance determinants may present a significant threat.
Acinetobacter Infections/microbiology
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Acinetobacter baumannii/*genetics/isolation & purification
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Anti-Bacterial Agents/*pharmacology
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Bacterial Proteins/genetics
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DNA Gyrase/genetics
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DNA, Bacterial/chemistry/genetics
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Drug Resistance, Bacterial/*genetics
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Humans
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Imipenem/*pharmacology
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Integrons/genetics
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Methyltransferases/genetics
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Microbial Sensitivity Tests
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Mutation
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Polymerase Chain Reaction
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Republic of Korea
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Sequence Analysis, DNA
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beta-Lactamases/biosynthesis/genetics
4.Relation of promoter methylation of mdr-1 gene and histone acetylation status with multidrug resistance in MCF-7/Adr cells.
Chenghui HUANG ; Peiguo CAO ; Zhaoxia XIE
Journal of Central South University(Medical Sciences) 2009;34(5):369-374
OBJECTIVE:
To analyze the mdr-1 gene promoter methylation and histone acetylation status in both MCF-7/Adr and MCF-7 cells and to preliminarily explore the epigenetic mechanism of multidrug resistance in breast cancer.
METHODS:
mdr-1 gene promoter methylation status of the 2 cell lines was detected by methylation-sensitive PCR. mRNA expression of DNA methyltransferases (DNMTs) and histone deacetylases (HDACs) was detected by real-time quantitative PCR. Acetylation level of histone H3 and H4 was examined by optical density assay.
RESULTS:
Promoter hypermethylation of mdr-1 gene was observed in MCF-7 cells whereas hypomethylation was found in MCF-7/Adr cells. Expression of DNMT1, DNMT3a, and DNMT3b mRNA in MCF-7/Adr cells significantly decreased compared with that of MCF-7 cells (P<0.05). H3 and H4 histone acetylation levels of MCF-7/Adr cells were obviously higher than those of the MCF-7 cells (P<0.01). Expression of HDAC1, HDAC2, HDAC7, and Sirtuin type 1 (SIRT1) mRNA in MCF-7/Adr cells was significantly reduced (P<0.05).
CONCLUSION
Hypomethylation of the promoter region of mdr-1 gene, high H3 and H4 histone acetylation, and low mRNA expression of DNMTs and HDACs may be important epigenetic factors for the development of MDR in MCF-7/ Adr cells.
ATP Binding Cassette Transporter, Subfamily B, Member 1
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genetics
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Acetylation
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Breast Neoplasms
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pathology
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Cell Line, Tumor
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DNA (Cytosine-5-)-Methyltransferase 1
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DNA (Cytosine-5-)-Methyltransferases
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genetics
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metabolism
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DNA Methylation
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genetics
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Drug Resistance, Multiple
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genetics
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Drug Resistance, Neoplasm
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genetics
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Epigenesis, Genetic
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Female
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Histone Deacetylases
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genetics
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metabolism
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Histones
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chemistry
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Humans
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Promoter Regions, Genetic
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genetics
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RNA, Messenger
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genetics
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metabolism
5.Differences in the Adverse Effects of Azathioprine between Inflammatory Bowel Disease and Autoimmune Hepatitis in Korean Patients.
Yoo Jin LEE ; Wang Yong CHOI ; Kyung Sik PARK ; Yun Jung KIM ; Kwang Bum CHO ; Eun Soo KIM ; Byoung Kuk JANG ; Woo Jin CHUNG ; Jae Seok HWANG
The Korean Journal of Gastroenterology 2014;64(6):348-355
BACKGROUND/AIMS: Azathioprine (AZA) has been widely used in the therapy of inflammatory bowel disease (IBD) and autoimmune hepatitis (AIH). However, studies evaluating the adverse effects of AZA in these two diseases are lacking. The aim of this study was to compare the adverse effects of AZA in Korean IBD and AIH patients. METHODS: Patients with IBD or AIH who were treated with AZA at Keimyung University Dongsan Medical Center (Daegu, Korea) between January 2002 and March 2011 were enrolled. Their medical records were reviewed retrospectively in terms of clinical characteristics and adverse effects of AZA. RESULTS: A total of 139 IBD patients and 55 AIH patients were finally enrolled. Thirty IBD patients (21.6%) and eight AIH patients (14.5%) experienced adverse effects of AZA. In particular, the prevalence of leukopenia was significantly higher in the IBD group than in the AIH group (p=0.026). T474C mutation was observed in three of 10 patients who were assessed for thiopurine methyltransferase (TPMT) genotype. CONCLUSIONS: IBD patients are at increased risk for the adverse effects of AZA compared with AIH patients, of which leukopenia was the most commonly observed. Therefore, IBD patients receiving AZA therapy should be carefully monitored.
Adolescent
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Adult
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Aged
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Azathioprine/adverse effects/*therapeutic use
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Base Sequence
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Female
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Genotype
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Hepatitis, Autoimmune/*drug therapy
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Humans
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Immunosuppressive Agents/adverse effects/*therapeutic use
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Inflammatory Bowel Diseases/*drug therapy
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Leukopenia/epidemiology/etiology
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Male
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Methyltransferases/chemistry/genetics
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Middle Aged
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Polymorphism, Single Nucleotide
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Republic of Korea
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Retrospective Studies
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Young Adult