1.Application of Multiple Genetic Markers in a Case of Determination of Half Sibling.
Xue YANG ; Mei-sen SHI ; Li YUAN ; Di LU
Journal of Forensic Medicine 2016;32(1):45-48
OBJECTIVE:
A case of half sibling was determined with multiple genetic markers, which could be potentially applied for determination of half sibling relationship from same father.
METHODS:
Half sibling relationship was detected by 39 autosomal STR genetic markers, 23 Y-chromosomal STR genetic markers and 12 X -chromosomal STR genetic markers among ZHAO -1, ZHAO -2, ZHAO -3, ZHAO -4, and ZHAO-5.
RESULTS:
According to autosomal STR, Y-STR and X-STR genotyping results, it was determined that ZHAO-4 (alleged half sibling) was unrelated with ZHAO-1 and ZHAO-2; however, ZHAO-3 (alleged half sibling), ZHAO-5 (alleged half sibling) shared same genetic profile with ZHAO-1, and ZHAO-2 from same father.
CONCLUSION
It is reliable to use multiple genetic markers and family gene reconstruction to determine half sibling relationship from same father, but it is difficult to determination by calculating half sibling index with ITO and discriminant functions.
Alleles
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Chromosomes, Human, Y/genetics*
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Discriminant Analysis
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Gene Frequency
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Genetic Loci/genetics*
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Genetic Markers
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Genotype
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Humans
;
Paternity
;
Siblings
2.Experience of Shi's Bian stone comprehensive therapy for treating periarthritis of shoulder.
Yue-Sen DING ; Mei MAO ; An-Li SHI
Chinese Acupuncture & Moxibustion 2011;31(1):68-70
The experiences of Doctor SHI An-li, who created the SHI's Bian stone comprehensive therapy, for treating periarthritis of shoulder are introduced. There are three important points: (1) emphasizing selection of points and manipulation; (2) using the Bian stone comprehensive therapy flexibly; (3) practicing the elongated needle on the obstinate periarthritis of shoulder, and the manipulation process are explained in detail.
Acupuncture Therapy
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Combined Modality Therapy
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Complementary Therapies
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Female
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Humans
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Massage
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Middle Aged
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Periarthritis
;
therapy
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Shoulder Pain
;
therapy
3.Establishment and Verification of 6-color Fluorescent-labeled Rapid PCR Amplification System.
Ya-ju LIU ; Jun-tao ZHANG ; Hai-ying JIN ; Mei-sen SHI
Journal of Forensic Medicine 2016;32(2):109-113
OBJECTIVE:
To establish the rapid PCR amplification program and system and to verify the technical indexes.
METHODS:
PCR multiplex and capillary electrophoresis detection of 24 autosomal STR loci and one Y-STR loci using the 6-color fluorescence marking technology, as well as A melogenin and Y-InDel. Meanwhile, sensitivity, specificity, identity, stability, mixing and a batch of sample tests were investigated, and the genotype of various routine samples and degraded, exfoliated cell samples were observed.
RESULTS:
The sensitivity of the system was 0.062 5 ng. In addition, the genotype could be detected accurately only around 65 min via rapid amplification. The species-specificity was high and the genotyping of all kinds of dry blood specimens of filter paper and mixed, degraded, exfoliated cell samples were accurate.
CONCLUSION
The rapid amplification system can significantly improve the detection rate, and obtain accurate and stable genotyping results, which may be important implications for the establishment of STR database and study on population genetics and forensic identification.
Electrophoresis, Capillary
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Fluorescence
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Genetics, Population
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Genotype
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Humans
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Microsatellite Repeats
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Multiplex Polymerase Chain Reaction/methods*
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Sensitivity and Specificity
4.Regulatory T cells and Th17 cells populations in myelodysplastic syndromes and its clinical significance.
Xue-mei ZHU ; Shu-fang LIU ; Xiao-liu LIU ; Xiang XIAO ; Shi-cong ZHU ; Guang-sen ZHANG
Chinese Journal of Hematology 2013;34(6):548-549
Adult
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Aged
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Case-Control Studies
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Female
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Humans
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Male
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Middle Aged
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Myelodysplastic Syndromes
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immunology
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metabolism
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T-Lymphocytes, Regulatory
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metabolism
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Th17 Cells
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metabolism
5.DNA samples preparation from single cell and its application in sensitivity test.
Jian-qiang DENG ; Mei-sen SHI ; Bing-wu YING
Journal of Forensic Medicine 2005;21(1):6-8
OBJECTIVE:
To establish a reliable, exact and practical method to prepare DNA samples for sensitivity-test purposes.
METHODS:
The micromanipulation method was employed to prepare exact quantity DNA samples used to study the sensitivity of Profiler Plus Kit-ABI PRISM 310 system.
RESULTS:
We succeed in establishing a micromanipulation method to prepare groups of DNA samples, which contain 1-11 cells in turn, and also succeed in using them to study the sensitivity of Profiler Plus Kit-ABI310 system.
CONCLUSION
The method we have established is proved to be a reliable, exact and practical way to prepare DNA samples for sensitivity-test purposes.
DNA/isolation & purification*
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DNA Fingerprinting/methods*
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Microscopy
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Polymerase Chain Reaction
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Sensitivity and Specificity
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Specimen Handling/methods*
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Tandem Repeat Sequences
7.Genetic polymorphism of 6 short tandem repeat loci in Chinese Han population in Shanxi.
Li YUAN ; Jian YE ; Chen-tao JIANG ; Mei-sen SHI ; Tao WANG
Chinese Journal of Medical Genetics 2010;27(2):225-228
OBJECTIVETo obtain the polymorphism data of six short tandem repeat (STR) loci, i.e. D9S925, D11S2368, D14S608, D15S659, D17S1290 and D20S470, in Chinese Han population in Shanxi province, and to evaluate the usefulness of the polymorphism data in forensic science.
METHODSThe D9S925, D11S2368, D14S608, D17S1290 and D20S470 primers were synthesized according to GenBank, while the D15S659 primers were self-designed. These primers were used to amplify DNA from 194 unrelated individuals collected from Shanxi Han population. Then the amplified fragments were separated by electrophoresis in 3130 Genetic Analyzer. GeneMapper3.2 software was used to analyze the results.
RESULTSThe distributions of genotypes for the six STR loci were in accordance with Hardy-Weinberg equilibrium. The polymorphism information content (PIC) of the six STR loci were from 0.750 to 0.860, and the heterozygosity ranged from 0.756 to 0.894, and the discrimination power were from 0.920 to 0.965, and the probability of exclusion were from 0.519 to 0.784. The combined probability of exclusion and the combined discrimination power were 0.9988 and 0.99999998, respectively.
CONCLUSIONThe data indicated that D9S925, D11S2368, D14S608, D15S659, D17S1290 and D20S470 loci have high probability of exclusion and discrimination power. They can be used as genetic markers in forensic test and personal identification.
Asian Continental Ancestry Group ; genetics ; China ; ethnology ; Ethnic Groups ; ethnology ; genetics ; Genetic Loci ; genetics ; Genotype ; Humans ; Microsatellite Repeats ; genetics ; Polymorphism, Genetic
8.PEGylation of polyamidoamine dendrimer and the properties for gene vectors.
Chi WANG ; Shi-Rong PAN ; Hong-Mei WU ; Yu-Ting WEN ; Xin ZENG ; Min FENG
Acta Pharmaceutica Sinica 2011;46(1):102-108
Polyamidoamine-polyethylene glycol (PAMAM-PEG) copolymers were synthesized using IPDI as coupling reagent by two-step method. The copolymers were characterized by IR spectrum and 1H NMR spectrum, and the PEG conjugating ratios of the copolymers were calculated equal to 10% and 30% separately. MTT assay indicated that after PEGylation a lower cytotoxicity of the copolymers could be found, and with increasing PEG conjugating ratio the cytotoxicity decreased obviously. Agarose gel retardation assay demonstrated that PAMAM-PEG copolymers could be combined with DNA and PAMAM-PEG/DNA complexes were prepared by self-assembly. DLS measurement showed that when N/P > or = 50, the particle size of copolymer/ gene complexes was in a range of 150-200 nm, and the zeta potential was in a range of 10-25 mV. In vitro gene transfection illustrated that when N/P < or = 50, the gene transfection efficiency of PAMAM-PEG copolymers was a little less than that of PAMAM-G5, but the transfection efficiency can be raised by increasing N/P ratio or transfection time. Considering both cytotoxicity and transfection efficiency aspects PAMAM-PEG-13 was more effect than PAMAM-PEG-39 in PEGylation.
Carcinoma, Hepatocellular
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pathology
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Cell Line, Tumor
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Cell Survival
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drug effects
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DNA
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chemistry
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pharmacology
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Dendrimers
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chemical synthesis
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pharmacology
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Gene Transfer Techniques
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Genetic Vectors
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Humans
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Isocyanates
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chemistry
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Liver Neoplasms
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pathology
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Particle Size
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Polyamines
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chemistry
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Polyethylene Glycols
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chemical synthesis
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chemistry
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pharmacology
;
Transfection
9.Polymorphisms of 11 Y-chromosomal short tandem repeat loci in Chongqing Tujia ethnic group and genetic relationships with 16 populations.
Mei-sen SHI ; Ru-feng BAI ; Li-hua WAN ; Xiao-jun YU
Chinese Journal of Medical Genetics 2008;25(4):477-482
OBJECTIVETo investigate the genetic polymorphisms of 11 Y-chromosomal short tandem repeats (STR) loci in Chongqing Tujia population, and to evaluate their forensic application values and genetic relationships with the other 16 populations of China.
METHODSEleven Y-STR loci in 215 unrelated Tujia individuals from Chongqing were amplified with PowerPlex Y System, and the PCR products were analyzed by 310 Genetic Analyzer. Cluster analysis and phylogenic trees were applied to show the genetic distance among the populations.
RESULTSA total of 195 haplotypes were identified and the overall haplotypes diversity for the 11 Y-STR loci was 0.9942. The gene diversity values (GD) for each locus ranged from 0.3757 (DYS391) to 0.9170 (DYS385a/b). Comparing with other 16 populations, the genetic distance between Tujia and Tibetan was the nearest (0.02467), that between the Tujia and Korean ethnic groups was the farthest (0.25350).
CONCLUSIONThe genetic distribution of the 11 Y-STR loci in Chongqing Tujia population showed favorable polymorphisms. They are suitable for forensic identification and paternity testing in the local area. The study of genetic diversity among different populations is useful in understanding their origins, migrations and their relationships.
China ; ethnology ; Chromosomes, Human, Y ; Ethnic Groups ; ethnology ; genetics ; Genetic Variation ; Humans ; Male ; Microsatellite Repeats ; genetics ; Polymorphism, Genetic ; Population Groups ; genetics
10.The Y-STR polymorphisms and phylogenetic relationships of two minority populations in Liaoning province.
Ru-feng BAI ; Mei-sen SHI ; Xiao-jun YU ; Zhi-ya NA
Chinese Journal of Medical Genetics 2008;25(4):469-472
OBJECTIVETo investigate the genetic polymorphisms of 11 Y-chromosomal short tandem repeats (Y-STR) loci in 484 male individuals from two minority populations, the Hui and Xibe, of Liaoning province, and to evaluate their forensic application values and genetic relationships with other 15 populations of China.
METHODSEleven Y-STR loci in all samples were amplified with PowerPlex Y System, and the PCR products were analyzed by 310 Genetic Analyzer. Cluster analysis and neighbor-joining tree were applied to show the genetic distance among the populations.
RESULTSIn Hui people, 187 haplotypes were identified, and the overall haplotype diversity value was 0.9990. The gene diversity values (GD) for each locus ranged from 0.4783(DYS437) to 0.9679(DYS385a/b); In Xibe people, 237 haplotypes were identified, and the overall haplotype diversity value was 0.9984. The GD value for each locus ranged from 0.3618(DYS391) to 0.9686(DYS385a/b). Comparing with 15 reference populations, the genetic distance between the Hui and Xibe was the nearest (0.0257), and that between the Hui and Yi was the farthest (0.1046), while the genetic distance between Xibe and Korean was also the farthest (0.0978). The NJ tree was similar to the results of clustering analysis and all the 17 populations were clustered into 3 groups.
CONCLUSIONThe genetic distribution of the 11 Y-STR loci in Liaoning Hui and Xibe ethnic groups showed favorable polymorphisms, therefore are suitable for forensic identification and paternity testing in the local area. The study of haplotype diversity among different populations is useful in understanding their origins, migrations and their relationships.
Asian Continental Ancestry Group ; genetics ; China ; Chromosomes, Human, Y ; Ethnic Groups ; classification ; genetics ; Genetics, Population ; Haplotypes ; Humans ; Male ; Minority Groups ; Phylogeny ; Polymorphism, Genetic ; Tandem Repeat Sequences ; genetics