1.Population Genetics of Plasmodium vivax in Four High Malaria Endemic Areas in Thailand.
Kanungnit CONGPUONG ; Ratawan UBALEE
The Korean Journal of Parasitology 2017;55(5):465-472
Recent trends of malaria in Thailand illustrate an increasing proportion of Plasmodium vivax, indicating the importance of P. vivax as a major causative agent of malaria. P. vivax malaria is usually considered a benign disease so the knowledge of this parasite has been limited, especially the genetic diversity and genetic structure of isolates from different endemic areas. The aim of this study was to examine the population genetics and structure of P. vivax isolates from 4 provinces with different malaria endemic settings in Thailand using 6 microsatellite markers. Total 234 blood samples from P. vivax mono-infected patients were collected. Strong genetic diversity was observed across all study sites; the expected heterozygosity values ranged from 0.5871 to 0.9033. Genetic variability in this study divided P. vivax population into 3 clusters; first was P. vivax isolates from Mae Hong Son and Kanchanaburi Provinces located on the western part of Thailand; second, Yala isolates from the south; and third, Chanthaburi isolates from the east. P. vivax isolates from patients having parasite clearance time (PCT) longer than 24 hr after the first dose of chloroquine treatment had higher diversity when compared with those having PCT within 24 hr. This study revealed a clear evidence of different population structure of P. vivax from different malaria endemic areas of Thailand. The findings provide beneficial information to malaria control programme as it is a useful tool to track the source of infections and current malaria control efforts.
Chloroquine
;
Genetic Structures
;
Genetic Variation
;
Genetics, Population*
;
Humans
;
Malaria*
;
Malaria, Vivax
;
Microsatellite Repeats
;
Parasites
;
Plasmodium vivax*
;
Plasmodium*
;
Thailand*
2.Genetic Polymorphisms in VIR Genes among Indian Plasmodium vivax Populations.
Purva GUPTA ; Veena PANDE ; Aparup DAS ; Vineeta SINGH
The Korean Journal of Parasitology 2014;52(5):557-564
The vir genes are antigenic genes and are considered to be possible vaccine targets. Since India is highly endemic to Plasmodium vivax, we sequenced 5 different vir genes and investigated DNA sequence variations in 93 single-clonal P. vivax isolates. High variability was observed in all the 5 vir genes; the vir 1/9 gene was highly diverged across Indian populations. The patterns of genetic diversity do not follow geographical locations, as geographically distant populations were found to be genetically similar. The results in general present complex genetic diversity patterns in India, requiring further in-depth population genetic and functional studies.
Antigens, Protozoan/*genetics
;
Humans
;
India/epidemiology
;
Malaria, Vivax/epidemiology/parasitology
;
Phylogeny
;
Plasmodium vivax/*genetics
;
*Polymorphism, Genetic
;
Protozoan Proteins/genetics/*metabolism
3.Study on the polymorphism in circumsporozoite protein of Plasmodium vivax before the completion on elimination program of malaria, in Hainan province.
Yuchun LI ; Shanqing WANG ; Ximin HU ; Guangze WANG ; Feng MENG ; Wen ZENG ; Chunxiang CHEN ; Chongjin TONG
Chinese Journal of Epidemiology 2014;35(3):303-306
OBJECTIVETo explore the polymorphism in circumsporozoite protein of Plasmodium vivax before malaria was eliminated in Hainan island.
METHODSPCR amplification, sequencing, and alignment methodologies were conducted and phylogenetic tree constructed.
RESULTSFrom all the cases, 19 of them belonged to two types, with 18 as VK210 type and 1 as VK247 type. VK210 type could be divided into seven kinds of subtypes but VK247 had only one type. Ratio of tropical strain with temperate stain in VK210 type was explored between the two stages:control or elimination. Phylogenetic tree was constructed by amino acid sequencing which clearly manifested that VK210 type and VK247 type belonged to different clusters.
CONCLUSIONCompared the proportion of two types in the control stage, there was no significant difference seen in the stage of elimination.
China ; epidemiology ; Genotype ; Humans ; Malaria, Vivax ; epidemiology ; prevention & control ; Plasmodium vivax ; classification ; genetics ; isolation & purification ; Polymorphism, Genetic ; Spores, Protozoan ; genetics
4.Coexistence of Malaria and Thalassemia in Malaria Endemic Areas of Thailand.
Jiraporn KUESAP ; W CHAIJAROENKUL ; K RUNGSIHIRUNRAT ; K PONGJANTHARASATIEN ; Kesara NA-BANGCHANG
The Korean Journal of Parasitology 2015;53(3):265-270
Hemoglobinopathy and malaria are commonly found worldwide particularly in malaria endemic areas. Thalassemia, the alteration of globin chain synthesis, has been reported to confer resistance against malaria. The prevalence of thalassemia was investigated in 101 malaria patients with Plasmodium falciparum and Plasmodium vivax along the Thai-Myanmar border to examine protective effect of thalassemia against severe malaria. Hemoglobin typing was performed using low pressure liquid chromatography (LPLC) and alpha-thalassemia was confirmed by multiplex PCR. Five types of thalassemia were observed in malaria patients. The 2 major types of thalassemia were Hb E (18.8%) and alpha-thalassemia-2 (11.9%). There was no association between thalassemia hemoglobinopathy and malaria parasitemia, an indicator of malaria disease severity. Thalassemia had no significant association with P. vivax infection, but the parasitemia in patients with coexistence of P. vivax and thalassemia was about 2-3 times lower than those with coexistence of P. falciparum and thalassemia and malaria without thalassemia. Furthermore, the parasitemia of P. vivax in patients with coexistence of Hb E showed lower value than coexistence with other types of thalassemia and malaria without coexistence. Parasitemia, hemoglobin, and hematocrit values in patients with coexistence of thalassemia other than Hb E were significantly lower than those without coexistence of thalassemia. Furthermore, parasitemia with coexistence of Hb E were 2 times lower than those with coexistence of thalassemia other than Hb E. In conclusion, the results may, at least in part, support the protective effect of thalassemia on the development of hyperparasitemia and severe anemia in malaria patients.
Female
;
Hemoglobins/genetics/metabolism
;
Humans
;
Malaria, Falciparum/blood/complications/*genetics/parasitology
;
Malaria, Vivax/blood/complications/*genetics/parasitology
;
Male
;
Middle Aged
;
Plasmodium falciparum/physiology
;
Plasmodium vivax/physiology
;
Thailand/epidemiology
;
Thalassemia/blood/complications/epidemiology/*genetics
5.Population Dynamics of Five Anopheles Species of the Hyrcanus Group in Northern Gyeonggi-do, Korea.
Kyoung Yong JEONG ; Sunjin UN ; Jongweon LEE ; In Yong LEE ; Tai Soon YONG ; Han Il REE
The Korean Journal of Parasitology 2010;48(4):351-353
To investigate the population densities of potential malaria vectors, Anopheles species were collected by light traps in malaria endemic areas, Paju and Gimpo, Gyeonggi-do of Korea. Five Anopheles Hyrcanus sibling species (An. sinensis, An. pullus, An. lesteri, An. kleini, and An. belenrae) were identified by PCR. The predominant species, An. pullus was collected during the late spring and mid-summer, while higher population consists of An. sinensis were collected from late summer to early autumn. These 2 species accounted for 92.1% of all Anopheles mosquitoes collected, while the other 3 species accounted for 7.9%. Taking into account of these population densities, late seasonal prevalence, and long-term incubation period (9-13 months) of the Korean Plasmodium vivax strain, An. sinensis s.s is thought to play an important role in the transmission of vivax malaria in the study areas.
Animals
;
Anopheles/*classification/genetics/*growth & development
;
Humans
;
Malaria, Vivax/transmission
;
Polymerase Chain Reaction/methods
;
Population Dynamics
;
Republic of Korea
;
Seasons
6.Identification of Immunodominant B-cell Epitope Regions of Reticulocyte Binding Proteins in Plasmodium vivax by Protein Microarray Based Immunoscreening.
Jin Hee HAN ; Jian LI ; Bo WANG ; Seong Kyun LEE ; Myat Htut NYUNT ; Sunghun NA ; Jeong Hyun PARK ; Eun Taek HAN
The Korean Journal of Parasitology 2015;53(4):403-411
Plasmodium falciparum can invade all stages of red blood cells, while Plasmodium vivax can invade only reticulocytes. Although many P. vivax proteins have been discovered, their functions are largely unknown. Among them, P. vivax reticulocyte binding proteins (PvRBP1 and PvRBP2) recognize and bind to reticulocytes. Both proteins possess a C-terminal hydrophobic transmembrane domain, which drives adhesion to reticulocytes. PvRBP1 and PvRBP2 are large (> 326 kDa), which hinders identification of the functional domains. In this study, the complete genome information of the P. vivax RBP family was thoroughly analyzed using a prediction server with bioinformatics data to predict B-cell epitope domains. Eleven pvrbp family genes that included 2 pseudogenes and 9 full or partial length genes were selected and used to express recombinant proteins in a wheat germ cell-free system. The expressed proteins were used to evaluate the humoral immune response with vivax malaria patients and healthy individual serum samples by protein microarray. The recombinant fragments of 9 PvRBP proteins were successfully expressed; the soluble proteins ranged in molecular weight from 16 to 34 kDa. Evaluation of the humoral immune response to each recombinant PvRBP protein indicated a high antigenicity, with 38-88% sensitivity and 100% specificity. Of them, N-terminal parts of PvRBP2c (PVX_090325-1) and PvRBP2 like partial A (PVX_090330-1) elicited high antigenicity. In addition, the PvRBP2-like homologue B (PVX_116930) fragment was newly identified as high antigenicity and may be exploited as a potential antigenic candidate among the PvRBP family. The functional activity of the PvRBP family on merozoite invasion remains unknown.
Epitopes, B-Lymphocyte/*chemistry/genetics/*immunology
;
Female
;
Humans
;
Immunodominant Epitopes/chemistry/genetics/*immunology
;
Malaria, Vivax/immunology/*parasitology
;
Middle Aged
;
Plasmodium vivax/chemistry/genetics/*immunology
;
Protein Structure, Tertiary
;
Protozoan Proteins/chemistry/genetics/*immunology
;
Reticulocytes/*parasitology
7.Plasmodium vivax Drug Resistance Genes; Pvmdr1 and Pvcrt-o Polymorphisms in Relation to Chloroquine Sensitivity from a Malaria Endemic Area of Thailand.
Kanchana RUNGSIHIRUNRAT ; Poonuch MUHAMAD ; Wanna CHAIJAROENKUL ; Jiraporn KUESAP ; Kesara NA-BANGCHANG
The Korean Journal of Parasitology 2015;53(1):43-49
The aim of the study was to explore the possible molecular markers of chloroquine resistance in Plasmodium vivax isolates in Thailand. A total of 30 P. vivax isolates were collected from a malaria endemic area along the Thai-Myanmar border in Mae Sot district of Thailand. Dried blood spot samples were collected for analysis of Pvmdr1 and Pvcrt-o polymorphisms. Blood samples (100 mul) were collected by finger-prick for in vitro chloroquine susceptibility testing by schizont maturation inhibition assay. Based on the cut-off IC50 of 100 nM, 19 (63.3%) isolates were classified as chloroquine resistant P. vivax isolates. Seven non-synonymous mutations and 2 synonymous were identified in Pvmdr1 gene. Y976F and F1076L mutations were detected in 7 (23.3%) and 16 isolates (53.3%), respectively. Analysis of Pvcrt-o gene revealed that all isolates were wild-type. Our results suggest that chloroquine resistance gene is now spreading in this area. Monitoring of chloroquine resistant molecular markers provide a useful tool for future control of P. vivax malaria.
Amino Acid Substitution
;
Antimalarials/*pharmacology
;
Chloroquine/*pharmacology
;
*Drug Resistance
;
Humans
;
Inhibitory Concentration 50
;
Malaria, Vivax/*parasitology
;
Membrane Transport Proteins/*genetics
;
Multidrug Resistance-Associated Proteins/*genetics
;
Mutation, Missense
;
Myanmar
;
Parasitic Sensitivity Tests
;
Plasmodium vivax/*drug effects/genetics
;
Protozoan Proteins/*genetics
;
Thailand
8.Plasmodium vivax Drug Resistance Genes; Pvmdr1 and Pvcrt-o Polymorphisms in Relation to Chloroquine Sensitivity from a Malaria Endemic Area of Thailand.
Kanchana RUNGSIHIRUNRAT ; Poonuch MUHAMAD ; Wanna CHAIJAROENKUL ; Jiraporn KUESAP ; Kesara NA-BANGCHANG
The Korean Journal of Parasitology 2015;53(1):43-49
The aim of the study was to explore the possible molecular markers of chloroquine resistance in Plasmodium vivax isolates in Thailand. A total of 30 P. vivax isolates were collected from a malaria endemic area along the Thai-Myanmar border in Mae Sot district of Thailand. Dried blood spot samples were collected for analysis of Pvmdr1 and Pvcrt-o polymorphisms. Blood samples (100 mul) were collected by finger-prick for in vitro chloroquine susceptibility testing by schizont maturation inhibition assay. Based on the cut-off IC50 of 100 nM, 19 (63.3%) isolates were classified as chloroquine resistant P. vivax isolates. Seven non-synonymous mutations and 2 synonymous were identified in Pvmdr1 gene. Y976F and F1076L mutations were detected in 7 (23.3%) and 16 isolates (53.3%), respectively. Analysis of Pvcrt-o gene revealed that all isolates were wild-type. Our results suggest that chloroquine resistance gene is now spreading in this area. Monitoring of chloroquine resistant molecular markers provide a useful tool for future control of P. vivax malaria.
Amino Acid Substitution
;
Antimalarials/*pharmacology
;
Chloroquine/*pharmacology
;
*Drug Resistance
;
Humans
;
Inhibitory Concentration 50
;
Malaria, Vivax/*parasitology
;
Membrane Transport Proteins/*genetics
;
Multidrug Resistance-Associated Proteins/*genetics
;
Mutation, Missense
;
Myanmar
;
Parasitic Sensitivity Tests
;
Plasmodium vivax/*drug effects/genetics
;
Protozoan Proteins/*genetics
;
Thailand
9.Genetic Polymorphisms in Plasmodium vivax Dihydrofolate Reductase and Dihydropteroate Synthase in Isolates from the Philippines, Bangladesh, and Nepal.
Pimwan THONGDEE ; Jiraporn KUESAP ; Kanchana RUNGSIHIRUNRAT ; Shyam Prakash DUMRE ; Effie ESPINO ; Harald NOEDL ; Kesara NA-BANGCHANG
The Korean Journal of Parasitology 2015;53(2):227-232
Genetic polymorphisms of pvdhfr and pvdhps genes of Plasmodium vivax were investigated in 83 blood samples collected from patients in the Philippines, Bangladesh, and Nepal. The SNP-haplotypes of the pvdhfr gene at the amino acid positions 13, 33, 57, 58, 61, 117, and 173, and that of the pvdhps gene at the positions 383 and 553 were analyzed by nested PCR-RFLP. Results suggest diverse polymorphic patterns of pvdhfr alone as well as the combination patterns with pvdhps mutant alleles in P. vivax isolates collected from the 3 endemic countries in Asia. All samples carried mutant combination alleles of pvdhfr and pvdhps. The most prevalent combination alleles found in samples from the Philippines and Bangladesh were triple mutant pvdhfr combined with single mutant pvdhps allele and triple mutant pvdhfr combined with double wild-type pvdhps alleles, respectively. Those collected from Nepal were quadruple mutant pvdhfr combined with double wild-type pvdhps alleles. New alternative antifolate drugs which are effective against sulfadoxine-pyrimethamine (SP)-resistant P. vivax are required.
Amino Acid Sequence
;
Bangladesh
;
Base Sequence
;
Dihydropteroate Synthase/*genetics
;
Humans
;
Malaria, Vivax/*parasitology
;
Molecular Sequence Data
;
Nepal
;
Philippines
;
Plasmodium vivax/*enzymology/*genetics/isolation & purification
;
*Polymorphism, Genetic
;
Tetrahydrofolate Dehydrogenase/*genetics
10.Plasmodium vivax dhfr Mutations among Isolates from Malarious Areas of Iran.
Jalal ZAMAN ; Abbas SHAHBAZI ; Mohammad ASGHARZADEH
The Korean Journal of Parasitology 2011;49(2):125-131
The use of sulfadoxine and pyrimethamine (SP) for treatment of vivax malaria is uncommon in most malarious areas, but Plasmodium vivax isolates are exposed to SP because of mixed infections with other Plasmodium species. As P. vivax is the most prevalent species of human malaria parasites in Iran, monitoring of resistance of the parasite against the drug is necessary. In the present study, 50 blood samples of symptomatic patients were collected from 4 separated geographical regions of south-east Iran. Point mutations at residues 57, 58, 61, and 117 were detected by the PCR-RFLP method. Polymorphism at positions 58R, 117N, and 117T of P. vivax dihydrofolate reductase (Pvdhfr) gene has been found in 12%, 34%, and 2% of isolates, respectively. Mutation at residues F57 and T61 was not detected. Five distinct haplotypes of the Pvdhfr gene were demonstrated. The 2 most prevalent haplotypes were F57S58T61S117 (62%) and F57S58T61N117 (24%). Haplotypes with 3 and 4 point mutations were not found. The present study suggested that P. vivax in Iran is under the pressure of SP and the sensitivity level of the parasite to SP is diminishing and this fact must be considered in development of malaria control programs.
Amino Acid Substitution/genetics
;
Antimalarials/*pharmacology
;
Drug Combinations
;
*Drug Resistance
;
Haplotypes
;
Humans
;
Iran
;
Malaria, Vivax/*parasitology
;
*Mutation, Missense
;
Plasmodium vivax/*enzymology/genetics/isolation & purification
;
Polymorphism, Genetic
;
Pyrimethamine/*pharmacology
;
Sulfadoxine/*pharmacology
;
Tetrahydrofolate Dehydrogenase/*genetics