1.Development and application of optogenetic tools.
Qiyao WEI ; Chenchen XU ; Meiyan WANG ; Haifeng YE
Chinese Journal of Biotechnology 2019;35(12):2238-2256
Dynamic variations of the cell microenvironment can affect cell differentiation, cell signaling pathways, individual growth, and disease. Optogenetics combines gene-encoded protein expression with optical controlling, and offers a novel, reversible, non-invasive and spatiotemporal-specific research tool to dynamically or reversibly regulate cell signaling pathways, subcellular localization and gene expression. This review summarizes the types of optogenetic components and the involved cellular signaling pathways, and explores the application and future prospects of the light-controlled cell signaling pathways.
Cell Differentiation
;
Light
;
Optogenetics
;
Proteins
;
Signal Transduction
2.Calcium Sensitization Mechanisms in Gastrointestinal Smooth Muscles.
Journal of Neurogastroenterology and Motility 2016;22(2):213-225
An increase in intracellular Ca2+ is the primary trigger of contraction of gastrointestinal (GI) smooth muscles. However, increasing the Ca2+ sensitivity of the myofilaments by elevating myosin light chain phosphorylation also plays an essential role. Inhibiting myosin light chain phosphatase activity with protein kinase C-potentiated phosphatase inhibitor protein-17 kDa (CPI-17) and myosin phosphatase targeting subunit 1 (MYPT1) phosphorylation is considered to be the primary mechanism underlying myofilament Ca2+ sensitization. The relative importance of Ca2+ sensitization mechanisms to the diverse patterns of GI motility is likely related to the varied functional roles of GI smooth muscles. Increases in CPI-17 and MYPT1 phosphorylation in response to agonist stimulation regulate myosin light chain phosphatase activity in phasic, tonic, and sphincteric GI smooth muscles. Recent evidence suggests that MYPT1 phosphorylation may also contribute to force generation by reorganization of the actin cytoskeleton. The mechanisms responsible for maintaining constitutive CPI-17 and MYPT1 phosphorylation in GI smooth muscles are still largely unknown. The characteristics of the cell-types comprising the neuroeffector junction lead to fundamental differences between the effects of exogenous agonists and endogenous neurotransmitters on Ca2+ sensitization mechanisms. The contribution of various cell-types within the tunica muscularis to the motor responses of GI organs to neurotransmission must be considered when determining the mechanisms by which Ca2+ sensitization pathways are activated. The signaling pathways regulating Ca2+ sensitization may provide novel therapeutic strategies for controlling GI motility. This article will provide an overview of the current understanding of the biochemical basis for the regulation of Ca2+ sensitization, while also discussing the functional importance to different smooth muscles of the GI tract.
Actin Cytoskeleton
;
Calcium*
;
Gastrointestinal Motility
;
Gastrointestinal Tract
;
Muscle, Smooth*
;
Myofibrils
;
Myosin Light Chains
;
Myosin-Light-Chain Phosphatase
;
Neuroeffector Junction
;
Neurotransmitter Agents
;
Phosphorylation
;
Protein Kinases
;
Signal Transduction
;
Synaptic Transmission
3.Early Reversible Changes on ERG in Pharmaceutically Induced Retinal Degeneration in Rats.
Kyu Hwa ROH ; Tae Kwann PARK ; Young Hoon OHN
Journal of the Korean Ophthalmological Society 2006;47(7):1117-1125
PURPOSE: To evaluate the early ERG (electroretinogram) changes in N-methyl-N-nitrosourea (MNU)-induced retinal degeneration in rats. METHODS: Thirty-six 6-week-old male rats were injected intraperitoneally with 60mg/kg MNU and divided into 6 groups. Histology and ERG were recorded for the rats of each group before treatment and at 3, 6, 12, 18, and 24 hours after MNU injection. Promptly after the ERG recording, rats were sacrificed and the eyeballs prepared for histologic sectioning. The Tdt-mediated dUTP-digoxigenin nick end labeling (TUNEL) method was used to detect photoreceptor cell death. RESULTS: The first decreases of ERG responses were noticed maximally at 3 hours after the treatment. Thereafter, the amplitude of the responses was partially recovered at 12 hours post-treatment. The second decrease of ERG amplitudes was observed in the 18-hour recordings, and those changes progressed to 24 hours after the treatment. In the histologic findings, TUNEL (+) cells in the Outer Nuclear Layer (ONL) were not detected at 3 hours after MNU injection, but were initially noticed at 6 hours post-injection. CONCLUSIONS: The first decreases of ERG amplitudes proceeded the appearance of TUNEL (+) cells in ONL, and these electrophysiological changes seemed to not be related to photoreceptor cell death. We propose that electrophysiological changes observed might be related to the MNU-induced activity enhancement of guanylate cyclase in the phototransduction pathway. We also show that photoreceptor cell death in the MNU-induced retinal degeneration model occurs at 6 hours after the treatment, which is earlier than the results of previous reports.
Animals
;
Guanylate Cyclase
;
Humans
;
In Situ Nick-End Labeling
;
Light Signal Transduction
;
Male
;
Methylnitrosourea
;
Photoreceptor Cells
;
Rats*
;
Retinal Degeneration*
;
Retinaldehyde*
4.Changes of Ionic Flow through the Internal Limiting Membrane during the Visual Adaptation of Vertebrate Eye.
Hyun Jung KIM ; Suk Hyang WOO ; You Young KIM ; Hyuk JUNG ; Si Yeol KIM ; Eun Hwi PARK
Journal of the Korean Ophthalmological Society 2000;41(7):1479-1492
It already has been known that various ions were participated in phototransduction mechanism of the vertebrate photoreceptor during the visual adaptation. The vitreous humor(VH)contains certain amount of Na+, K+ and Ca++ as well. However, the roles of these ions are unknown except functioning of metabolic process. Our preliminary electroretinogram(ERG) experiments suggested that the permeability of these ions has light dependent activity during the light illumination. We have supported this suggestion more tangibly by trying out various experiments with bullfrog eyes as a reference of visual adaptation. The results are summarized as follows: 1)According to our atomic absorption spectroscopic measurements, the concentration of Na+, K+ and Ca++ in light adapted VH was higher than that of dark adapted VH. This result indicated that the light-dependention transport systems which affect the ionic movements might be in internal limiting membrane(ILM). 2)The amplitude of ERG b-wave was reduced by concentration decrement of Na+ and concentration increment of K+ respectively. On the other hand, the elimination of Ca++ within ringer solution resulted in b-wave amplitude increment. 3)Treatment of Na+ hannel blockers(TTX, STX)and K+ channel blockers(Ba++, Cd++, Cs+, 4-AP and TEA)in the vitreous humor side induced the increment and the decrement of b-wave response respectively. Taken together, these results suggest that the light dependent Na+ K+ channels exist in the ILM of vertebrate retina which participates visual adaptation.
Absorption
;
Hand
;
Ions
;
Light Signal Transduction
;
Lighting
;
Membranes*
;
Metabolism
;
Permeability
;
Photoreceptor Cells, Vertebrate
;
Rana catesbeiana
;
Retina
;
Vertebrates*
;
Vitreous Body
5.Low Level Light Therapy Using an 830-nm Light Emitting Diode Promotes Wound Healing via TGF-β/SMAD Pathway Activation.
Sue Kyung KIM ; Byung Woo SOH ; You Chan KIM
Korean Journal of Dermatology 2017;55(4):237-245
BACKGROUND: The transforming growth factor-β/SMAD (TGF-β/SMAD) pathway plays an important role in tissue repair and collagen synthesis. Low-level light therapy (LLLT) is increasingly used to alleviate pain and inflammation and promote wound healing. However, few studies have directly compared the effects of different wavelengths of light-emitting diodes (LEDs) or examined their individual effects at the molecular level. OBJECTIVE: Here we used a mouse model to investigate the effect of blue (410 nm), red (630 nm), and infrared (830 nm) LEDs on wound closure and assessed the underlying changes in a signal transduction pathway. METHODS: A full-thickness wound was created on the dorsal skin of mice using a 6-mm-diameter punch. In part I, the wounds were irradiated using blue, red, and infrared LEDs. In part II, the wounds were irradiated at different time points. Photo documentation, serial skin biopsies, wound measurements, and immunohistochemical staining using TGF-β/SMAD pathway-related molecules were performed. RESULTS: The overall wound closure percentage was highest during the first 10 days when an 830-nm LED was used. The wound closure process was accelerated when the irradiation was initiated immediately after wounding. Irradiation using 830-nm LED upregulated TGF-β and collagen-1 but downregulated SMAD7. CONCLUSION: Our findings show that LLLT using an 830-nm wavelength LED delivered immediately after wound formation may have the best effect on wound healing by upregulating the TGF-β/SMAD signaling pathway.
Animals
;
Biopsy
;
Collagen
;
Inflammation
;
Low-Level Light Therapy*
;
Mice
;
Signal Transduction
;
Skin
;
Smad Proteins
;
Wound Healing*
;
Wounds and Injuries*
6.Advances in the study of signal transduction in cavernous smooth muscle.
Junping XING ; Xianfeng CUI ; Shudong QIU
National Journal of Andrology 2004;10(2):130-133
The signal transduction pathways within corporal smooth muscle cells are the intracellular molecular mechanisms of corporal smooth muscle tone regulation. Various neurotransmitters activate the membrane receptor proteins or intracellular enzyme pathways and result in the production of extracellular chemical signals. Second messenger molecules and ions transmit and amplify the signals, and subsequently induce the relaxation of smooth muscle cells and penile erection. Therefore, the study of signal transduction in cavernous smooth muscle play an important role in understanding the physiology of erection and the pathophysiology of erectile dysfunction as well as in developing new selective drugs for the treatment of erectile dysfunction.
Calcium
;
metabolism
;
Humans
;
Male
;
Muscle, Smooth
;
metabolism
;
Myosin-Light-Chain Kinase
;
physiology
;
Penis
;
metabolism
;
Signal Transduction
;
physiology
7.Role of phosphatidylinositol 3-kinase and myosin light chain kinase during the activation of thrombin receptors.
Yue HAN ; Hai-Li GAO ; Wei ZHANG ; Xia BAI ; Lan DAI ; Wen-Hong SHENG ; Ai-Ning SUN ; De-Pei WU ; Zhao-Yue WANG ; Chang-Geng RUAN
Journal of Experimental Hematology 2009;17(3):661-664
The objective of study was to compare the influences of wortmannin on platelet aggregation and platelet membrane surface glycoproteins GPIb expression after thrombin receptor activation, and to investigate the role of phosphatidylinositol 3-kinase (PI3-K) and myosin light chain kinase (MLCK) in the course of thrombin receptor activation. Peptide SFLLRN (PAR1-AP) and AYPGKF (PAR4-AP) were used for stimulating platelet, and the changes of platelet aggregation and GPIb were analyzed with 100 nmol/L wortmannin (inhibitor of PI3-K) and 10 micromol/L wortmannin (inhibitor of MLCK). The results indicated that the platelet activation was influenced by either concentration of wortmannin in response to PAR stimulation. Platelet aggregation was apparently inhibited by 10 micromol/L wortmannin through both PAR peptides, and was slightly inhibited by 100 nmol/L wortmannin only under PAR1-AP activation. In addition, GPIbalpha internalization was partly inhibited by 100 nmol/L wortmannin in response to PAR1 (p < 0.05 at 1, 2, 5 min) and PAR4 (p < 0.05 at 2, 5, 10 min) activation. Meanwhile, 10 micromol/L wortmannin induced little change for GPIbalpha centralisation in the course of PAR activation, with a delayed restoration of surface GPIbalpha observed under PAR1-AP activation, and no change of GPIbalpha redistribution existed under PAR4-AP activation. It is concluded that the different roles of PI3-K and MLCK exist in the course of thrombin receptor activation. PI3-K accelerates the short course of GPIb centralisation for two PAR signal pathways, while MLCK inhibits the restoration of GPIbalpha in PAR1 pathway.
Adult
;
Androstadienes
;
pharmacology
;
Female
;
Humans
;
Male
;
Myosin-Light-Chain Kinase
;
metabolism
;
Phosphatidylinositol 3-Kinase
;
metabolism
;
Platelet Activation
;
drug effects
;
Platelet Aggregation
;
Receptors, Thrombin
;
metabolism
;
physiology
;
Signal Transduction
8.Genomic basis for light control of plant development.
Jigang LI ; William TERZAGHI ; Xing Wang DENG
Protein & Cell 2012;3(2):106-116
Light is one of the key environmental signals regulating plant growth and development. Therefore, understanding the mechanisms by which light controls plant development has long been of great interest to plant biologists. Traditional genetic and molecular approaches have successfully identified key regulatory factors in light signaling, but recent genomic studies have revealed massive reprogramming of plant transcriptomes by light, identified binding sites across the entire genome of several pivotal transcription factors in light signaling, and discovered the involvement of epigenetic regulation in light-regulated gene expression. This review summarizes the key genomic work conducted in the last decade which provides new insights into light control of plant development.
Circadian Clocks
;
physiology
;
Epigenesis, Genetic
;
Gene Expression Regulation, Plant
;
Genome, Plant
;
Genomics
;
Light
;
Plant Development
;
Plants
;
genetics
;
metabolism
;
Signal Transduction
;
Transcription Factors
;
physiology
;
Transcriptome
;
Ultraviolet Rays
9.Spikes with short inter-spike intervals in frog retinal ganglion cells are more correlated with their adjacent neurons' activities.
Wen-Zhong LIU ; Ru-Jia YAN ; Wei JING ; Hai-Qing GONG ; Pei-Ji LIANG
Protein & Cell 2011;2(9):764-771
Correlated firings among neurons have been extensively investigated; however, previous studies on retinal ganglion cell (RGC) population activities were mainly based on analyzing the correlated activities between the entire spike trains. In the present study, the correlation properties were explored based on burst-like activities and solitary spikes separately. The results indicate that: (1) burst-like activities were more correlated with other neurons' activities; (2) burst-like spikes correlated with their neighboring neurons represented a smaller receptive field than that of correlated solitary spikes. These results suggest that correlated burst-like spikes should be more efficient in signal transmission, and could encode more detailed spatial information.
Action Potentials
;
Animals
;
Computer Simulation
;
Darkness
;
Electrophysiology
;
In Vitro Techniques
;
Light
;
Patch-Clamp Techniques
;
Postsynaptic Potential Summation
;
Rana catesbeiana
;
physiology
;
surgery
;
Retina
;
physiology
;
Retinal Ganglion Cells
;
physiology
;
Retinal Neurons
;
physiology
;
Signal Transduction
10.Gene expression profiling of light-induced retinal degeneration in phototransduction gene knockout mice.
Jayalakshmi KRISHNAN ; Jiayan CHEN ; Kum Joo SHIN ; Jong Ik HWANG ; Sang Uk HAN ; Gwang LEE ; Sangdun CHOI
Experimental & Molecular Medicine 2008;40(5):495-504
Exposure to light can induce photoreceptor cell death and exacerbate retinal degeneration. In this study, mice with genetic knockout of several genes, including rhodopsin kinase (Rhok-/-), arrestin (Sag-/-), transducin (Gnat1-/-), c-Fos (c-Fos-/-) and arrestin/transducin (Sag-/-/Gnat1-/-), were examined. We measured the expression levels of thousands of genes in order to investigate their roles in phototransduction signaling in light-induced retinal degeneration using DNA microarray technology and then further explored the gene network using pathway analysis tools. Several cascades of gene components were induced or inhibited as a result of corresponding gene knockout under specific light conditions. Transducin deletion blocked the apoptotic signaling induced by exposure to low light conditions, and it did not require c-Fos/AP-1. Deletion of c-Fos blocked the apoptotic signaling induced by exposure to high intensity light. In the present study, we identified many gene transcripts that are essential for the initiation of light-induced rod degeneration and proposed several important networks that are involved in pro- and anti-apoptotic signaling. We also demonstrated the different cascades of gene components that participate in apoptotic signaling under specific light conditions.
Animals
;
Apoptosis/radiation effects
;
G-Protein-Coupled Receptor Kinase 1/genetics
;
GTP-Binding Protein alpha Subunits/genetics
;
*Gene Expression Profiling
;
Genes, fos/genetics
;
Light/adverse effects
;
Light Signal Transduction/*genetics/physiology/radiation effects
;
Mice
;
Mice, Knockout
;
Oligonucleotide Array Sequence Analysis
;
Retina/metabolism/pathology/radiation effects
;
Retinal Degeneration/etiology/*genetics/physiopathology
;
Transducin/genetics